RNA–Protein interactions for RNA: ENST00000547630.1

C12orf49-203, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 1 (best)

Gene C12orf49, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-203ENST00000547630 PRAM1Q96QH2 718 aa29.38■■■□□ 2.29
C12orf49-203ENST00000547630 POGKQ9P215 609 aa29.36■■■□□ 2.29
C12orf49-203ENST00000547630 SAFB2Q14151 953 aaKnown RBP eCLIP29.35■■■□□ 2.29
C12orf49-203ENST00000547630 CADPS2Q86UW7 1296 aa29.35■■■□□ 2.29
C12orf49-203ENST00000547630 ROCK2O75116 1388 aaKnown RBP29.35■■■□□ 2.29
C12orf49-203ENST00000547630 DCCP43146 1447 aa29.34■■■□□ 2.29
C12orf49-203ENST00000547630 ARHGEF28Q8N1W1 1705 aaKnown RBP29.31■■■□□ 2.28
C12orf49-203ENST00000547630 SLAIN2Q9P270 581 aa29.31■■■□□ 2.28
C12orf49-203ENST00000547630 RALGAPBQ86X10 1494 aa29.29■■■□□ 2.28
C12orf49-203ENST00000547630 GPRASP1Q5JY77 1395 aa29.26■■■□□ 2.27
C12orf49-203ENST00000547630 CARD11Q9BXL7 1154 aa29.25■■■□□ 2.27
C12orf49-203ENST00000547630 MST1RQ04912 1400 aa29.25■■■□□ 2.27
C12orf49-203ENST00000547630 CDC42BPGQ6DT37 1551 aa29.25■■■□□ 2.27
C12orf49-203ENST00000547630 MINK1Q8N4C8 1332 aaPredicted RBP29.24■■■□□ 2.27
C12orf49-203ENST00000547630 HIRIP3Q9BW71 556 aaPredicted RBP29.22■■■□□ 2.27
C12orf49-203ENST00000547630 ROBO1Q9Y6N7 1651 aa29.21■■■□□ 2.27
C12orf49-203ENST00000547630 CENPJQ9HC77 1338 aaPredicted RBP29.19■■■□□ 2.26
C12orf49-203ENST00000547630 C1orf167Q5SNV9 1468 aa29.18■■■□□ 2.26
C12orf49-203ENST00000547630 NUTM2FA1L443 756 aa29.18■■■□□ 2.26
C12orf49-203ENST00000547630 ADGRB2O60241 1585 aa29.17■■■□□ 2.26
C12orf49-203ENST00000547630 FMN2Q9NZ56 1722 aa29.16■■■□□ 2.26
C12orf49-203ENST00000547630 BRINP3Q76B58 766 aa29.15■■■□□ 2.26
C12orf49-203ENST00000547630 EIF3AQ14152 1382 aaKnown RBP29.15■■■□□ 2.26
C12orf49-203ENST00000547630 HSPA1LP34931 641 aa29.14■■■□□ 2.26
C12orf49-203ENST00000547630 ORAI2Q96SN7 254 aa29.13■■■□□ 2.25
C12orf49-203ENST00000547630 QRICH2Q9H0J4 1663 aa29.12■■■□□ 2.25
C12orf49-203ENST00000547630 WASLO00401 505 aaPredicted RBP29.12■■■□□ 2.25
C12orf49-203ENST00000547630 ESCO1Q5FWF5 840 aa29.09■■■□□ 2.25
C12orf49-203ENST00000547630 CDK19Q9BWU1 502 aa29.06■■■□□ 2.24
C12orf49-203ENST00000547630 RGPD8O14715 1765 aaPredicted RBP29.05■■■□□ 2.24
C12orf49-203ENST00000547630 TULP4Q9NRJ4 1543 aa29.04■■■□□ 2.24
C12orf49-203ENST00000547630 ANKARQ7Z5J8 1434 aa29.04■■■□□ 2.24
C12orf49-203ENST00000547630 USP32Q8NFA0 1604 aa29.04■■■□□ 2.24
C12orf49-203ENST00000547630 DDX17Q92841 729 aaKnown RBP29.03■■■□□ 2.24
C12orf49-203ENST00000547630 PHLPP1O60346 1717 aa29.03■■■□□ 2.24
C12orf49-203ENST00000547630 PRR36Q9H6K5 1346 aa29.03■■■□□ 2.24
C12orf49-203ENST00000547630 AHDC1Q5TGY3 1603 aaPredicted RBP29.02■■■□□ 2.24
C12orf49-203ENST00000547630 USP47Q96K76 1375 aa29.01■■■□□ 2.23
C12orf49-203ENST00000547630 NHSL1Q5SYE7 1610 aa29■■■□□ 2.23
C12orf49-203ENST00000547630 ST20-MTHFSA0A0A6YYL1 179 aa29■■■□□ 2.23
C12orf49-203ENST00000547630 SRPK2P78362 688 aaKnown RBP28.99■■■□□ 2.23
C12orf49-203ENST00000547630 NUDT16Q96DE0 195 aaKnown RBP28.99■■■□□ 2.23
C12orf49-203ENST00000547630 EVC2Q86UK5 1308 aa28.98■■■□□ 2.23
C12orf49-203ENST00000547630 PHF8Q9UPP1 1060 aa28.98■■■□□ 2.23
C12orf49-203ENST00000547630 CABP2Q9NPB3 220 aa28.97■■■□□ 2.23
C12orf49-203ENST00000547630 SBNO2Q9Y2G9 1366 aa28.97■■■□□ 2.23
C12orf49-203ENST00000547630 ATP7BP35670 1465 aa28.97■■■□□ 2.23
C12orf49-203ENST00000547630 FOXO3O43524 673 aa28.96■■■□□ 2.23
C12orf49-203ENST00000547630 COL16A1Q07092 1604 aaPredicted RBP28.96■■■□□ 2.23
C12orf49-203ENST00000547630 KIF1AQ12756 1690 aa28.95■■■□□ 2.23
C12orf49-203ENST00000547630 PMFBP1Q8TBY8 1022 aa28.95■■■□□ 2.22
C12orf49-203ENST00000547630 NPHP3Q7Z494 1330 aa28.93■■■□□ 2.22
C12orf49-203ENST00000547630 TESK2Q96S53 571 aa28.92■■■□□ 2.22
C12orf49-203ENST00000547630 ITSN1Q15811 1721 aa28.91■■■□□ 2.22
C12orf49-203ENST00000547630 XPCQ01831 940 aaPredicted RBP28.9■■■□□ 2.22
C12orf49-203ENST00000547630 CCDC61Q9Y6R9 512 aa28.9■■■□□ 2.22
C12orf49-203ENST00000547630 SOS2Q07890 1332 aaPredicted RBP28.89■■■□□ 2.22
C12orf49-203ENST00000547630 TOPAZ1Q8N9V7 1692 aa28.88■■■□□ 2.21
C12orf49-203ENST00000547630 LRRC59Q96AG4 307 aaKnown RBP28.87■■■□□ 2.21
C12orf49-203ENST00000547630 PXDNQ92626 1479 aa28.86■■■□□ 2.21
C12orf49-203ENST00000547630 EIF4G2P78344 907 aaKnown RBP eCLIP28.86■■■□□ 2.21
C12orf49-203ENST00000547630 KRT28Q7Z3Y7 464 aa28.86■■■□□ 2.21
C12orf49-203ENST00000547630 NGDNQ8NEJ9 315 aaKnown RBP28.86■■■□□ 2.21
C12orf49-203ENST00000547630 PPIP5K1Q6PFW1 1433 aa28.85■■■□□ 2.21
C12orf49-203ENST00000547630 JCADQ9P266 1359 aa28.85■■■□□ 2.21
C12orf49-203ENST00000547630 SLC24A1O60721 1099 aa28.84■■■□□ 2.21
C12orf49-203ENST00000547630 HSPA5P11021 654 aaKnown RBP28.84■■■□□ 2.21
C12orf49-203ENST00000547630 PSME1Q06323 249 aa28.84■■■□□ 2.21
C12orf49-203ENST00000547630 PLEKHG3A1L390 1219 aa28.83■■■□□ 2.21
C12orf49-203ENST00000547630 CABP1Q9NZU7 370 aa28.81■■■□□ 2.2
C12orf49-203ENST00000547630 ATAD2Q6PL18 1390 aa28.8■■■□□ 2.2
C12orf49-203ENST00000547630 ACEP12821 1306 aa28.8■■■□□ 2.2
C12orf49-203ENST00000547630 TMF1P82094 1093 aa28.8■■■□□ 2.2
C12orf49-203ENST00000547630 DISP3Q9P2K9 1392 aa28.79■■■□□ 2.2
C12orf49-203ENST00000547630 POLR3AO14802 1390 aaPredicted RBP28.78■■■□□ 2.2
C12orf49-203ENST00000547630 SHPRHQ149N8 1683 aa28.78■■■□□ 2.2
C12orf49-203ENST00000547630 PUS7Q96PZ0 661 aaKnown RBP28.76■■■□□ 2.2
C12orf49-203ENST00000547630 PNPLA6Q8IY17 1366 aa28.76■■■□□ 2.19
C12orf49-203ENST00000547630 SPATA31A3Q5VYP0 1347 aa28.75■■■□□ 2.19
C12orf49-203ENST00000547630 SBNO1A3KN83 1393 aa28.74■■■□□ 2.19
C12orf49-203ENST00000547630 TMC1Q8TDI8 760 aa28.73■■■□□ 2.19
C12orf49-203ENST00000547630 TRPM3Q9HCF6 1732 aaPredicted RBP28.72■■■□□ 2.19
C12orf49-203ENST00000547630 TNS3Q68CZ2 1445 aa28.71■■■□□ 2.19
C12orf49-203ENST00000547630 SPATA31A6Q5VVP1 1343 aa28.71■■■□□ 2.19
C12orf49-203ENST00000547630 PAK3O75914 559 aaPredicted RBP28.71■■■□□ 2.19
C12orf49-203ENST00000547630 LMOD2Q6P5Q4 547 aa28.7■■■□□ 2.18
C12orf49-203ENST00000547630 CDCA8Q53HL2 280 aa28.69■■■□□ 2.18
C12orf49-203ENST00000547630 SLC12A5Q9H2X9 1139 aa28.69■■■□□ 2.18
C12orf49-203ENST00000547630 NUTM2BA6NNL0 878 aaPredicted RBP28.68■■■□□ 2.18
C12orf49-203ENST00000547630 NUTM2EB1AL46 878 aaPredicted RBP28.68■■■□□ 2.18
C12orf49-203ENST00000547630 NUTM2AQ8IVF1 878 aaPredicted RBP28.68■■■□□ 2.18
C12orf49-203ENST00000547630 MED1Q15648 1581 aaPredicted RBP28.67■■■□□ 2.18
C12orf49-203ENST00000547630 COL22A1Q8NFW1 1626 aaPredicted RBP28.66■■■□□ 2.18
C12orf49-203ENST00000547630 ZNF692Q9BU19 519 aaPredicted RBP28.65■■■□□ 2.18
C12orf49-203ENST00000547630 USP6P35125 1406 aa28.65■■■□□ 2.18
C12orf49-203ENST00000547630 ALS2Q96Q42 1657 aa28.64■■■□□ 2.18
C12orf49-203ENST00000547630 ARHGEF10O15013 1369 aa28.64■■■□□ 2.18
C12orf49-203ENST00000547630 AKAP12Q02952 1782 aa28.64■■■□□ 2.18
C12orf49-203ENST00000547630 CPSF1Q10570 1443 aaKnown RBP28.64■■■□□ 2.18
C12orf49-203ENST00000547630 LRP6O75581 1613 aa28.64■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms