RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 ATF3P18847 181 aa15.87■□□□□ 0.13
GCN1-202ENST00000547263 PHLPP1O60346 1717 aa15.85■□□□□ 0.13
GCN1-202ENST00000547263 BRINP3Q76B58 766 aa15.85■□□□□ 0.13
GCN1-202ENST00000547263 WAPLQ7Z5K2 1190 aa15.85■□□□□ 0.13
GCN1-202ENST00000547263 C14orf37Q86TY3 774 aa15.85■□□□□ 0.13
GCN1-202ENST00000547263 STK26Q9P289 416 aa15.84■□□□□ 0.13
GCN1-202ENST00000547263 SCAF1Q9H7N4 1312 aaKnown RBP15.84■□□□□ 0.13
GCN1-202ENST00000547263 CLSPNQ9HAW4 1339 aa15.84■□□□□ 0.13
GCN1-202ENST00000547263 GPRASP1Q5JY77 1395 aa15.82■□□□□ 0.12
GCN1-202ENST00000547263 SHPRHQ149N8 1683 aa15.81■□□□□ 0.12
GCN1-202ENST00000547263 USP32Q8NFA0 1604 aa15.81■□□□□ 0.12
GCN1-202ENST00000547263 NBPF1Q3BBV0 1214 aa15.8■□□□□ 0.12
GCN1-202ENST00000547263 PRAM1Q96QH2 718 aa15.8■□□□□ 0.12
GCN1-202ENST00000547263 PCGF6Q9BYE7 350 aa15.8■□□□□ 0.12
GCN1-202ENST00000547263 NEUROD1Q13562 356 aa15.79■□□□□ 0.12
GCN1-202ENST00000547263 RGPD8O14715 1765 aaPredicted RBP15.79■□□□□ 0.12
GCN1-202ENST00000547263 KIF1AQ12756 1690 aa15.79■□□□□ 0.12
GCN1-202ENST00000547263 MED1Q15648 1581 aaPredicted RBP15.79■□□□□ 0.12
GCN1-202ENST00000547263 ANKARQ7Z5J8 1434 aa15.78■□□□□ 0.12
GCN1-202ENST00000547263 TRAK1Q9UPV9 953 aa15.78■□□□□ 0.12
GCN1-202ENST00000547263 NBPF8Q3BBV2 869 aa15.77■□□□□ 0.12
GCN1-202ENST00000547263 RALGAPBQ86X10 1494 aa15.77■□□□□ 0.11
GCN1-202ENST00000547263 JCADQ9P266 1359 aa15.75■□□□□ 0.11
GCN1-202ENST00000547263 SOS2Q07890 1332 aaPredicted RBP15.75■□□□□ 0.11
GCN1-202ENST00000547263 TULP4Q9NRJ4 1543 aa15.75■□□□□ 0.11
GCN1-202ENST00000547263 ORAI2Q96SN7 254 aa15.75■□□□□ 0.11
GCN1-202ENST00000547263 PXDNQ92626 1479 aa15.75■□□□□ 0.11
GCN1-202ENST00000547263 TONSLQ96HA7 1378 aa15.75■□□□□ 0.11
GCN1-202ENST00000547263 TOPAZ1Q8N9V7 1692 aa15.73■□□□□ 0.11
GCN1-202ENST00000547263 QRICH2Q9H0J4 1663 aa15.73■□□□□ 0.11
GCN1-202ENST00000547263 POGKQ9P215 609 aa15.73■□□□□ 0.11
GCN1-202ENST00000547263 COL22A1Q8NFW1 1626 aaPredicted RBP15.72■□□□□ 0.11
GCN1-202ENST00000547263 ATP7BP35670 1465 aa15.72■□□□□ 0.11
GCN1-202ENST00000547263 TIMELESSQ9UNS1 1208 aa15.72■□□□□ 0.11
GCN1-202ENST00000547263 EIF3AQ14152 1382 aaKnown RBP15.72■□□□□ 0.11
GCN1-202ENST00000547263 WASLO00401 505 aaPredicted RBP15.71■□□□□ 0.11
GCN1-202ENST00000547263 ITSN1Q15811 1721 aa15.71■□□□□ 0.1
GCN1-202ENST00000547263 PRR36Q9H6K5 1346 aa15.7■□□□□ 0.1
GCN1-202ENST00000547263 ROCK2O75116 1388 aaKnown RBP15.7■□□□□ 0.1
GCN1-202ENST00000547263 SBNO2Q9Y2G9 1366 aa15.7■□□□□ 0.1
GCN1-202ENST00000547263 SAFB2Q14151 953 aaKnown RBP eCLIP15.69■□□□□ 0.1
GCN1-202ENST00000547263 SPATA31A6Q5VVP1 1343 aa15.68■□□□□ 0.1
GCN1-202ENST00000547263 NPHP3Q7Z494 1330 aa15.68■□□□□ 0.1
GCN1-202ENST00000547263 MINK1Q8N4C8 1332 aaPredicted RBP15.68■□□□□ 0.1
GCN1-202ENST00000547263 LRP6O75581 1613 aa15.68■□□□□ 0.1
GCN1-202ENST00000547263 PNPLA6Q8IY17 1366 aa15.68■□□□□ 0.1
GCN1-202ENST00000547263 DDX17Q92841 729 aaKnown RBP15.68■□□□□ 0.1
GCN1-202ENST00000547263 TRPM3Q9HCF6 1732 aaPredicted RBP15.68■□□□□ 0.1
GCN1-202ENST00000547263 CENPJQ9HC77 1338 aaPredicted RBP15.68■□□□□ 0.1
GCN1-202ENST00000547263 ESCO1Q5FWF5 840 aa15.67■□□□□ 0.1
GCN1-202ENST00000547263 LRRC59Q96AG4 307 aaKnown RBP15.67■□□□□ 0.1
GCN1-202ENST00000547263 HIRIP3Q9BW71 556 aaPredicted RBP15.66■□□□□ 0.1
GCN1-202ENST00000547263 PHF8Q9UPP1 1060 aa15.65■□□□□ 0.1
GCN1-202ENST00000547263 ALS2Q96Q42 1657 aa15.64■□□□□ 0.09
GCN1-202ENST00000547263 NUTM2FA1L443 756 aa15.64■□□□□ 0.09
GCN1-202ENST00000547263 FOXO3O43524 673 aa15.64■□□□□ 0.09
GCN1-202ENST00000547263 SBNO1A3KN83 1393 aa15.63■□□□□ 0.09
GCN1-202ENST00000547263 POLR3AO14802 1390 aaPredicted RBP15.62■□□□□ 0.09
GCN1-202ENST00000547263 DISP3Q9P2K9 1392 aa15.62■□□□□ 0.09
GCN1-202ENST00000547263 CDK19Q9BWU1 502 aa15.62■□□□□ 0.09
GCN1-202ENST00000547263 NUDT16Q96DE0 195 aaKnown RBP15.61■□□□□ 0.09
GCN1-202ENST00000547263 RGS17Q9UGC6 210 aaPredicted RBP15.61■□□□□ 0.09
GCN1-202ENST00000547263 SPATA31A3Q5VYP0 1347 aa15.61■□□□□ 0.09
GCN1-202ENST00000547263 TNS3Q68CZ2 1445 aa15.6■□□□□ 0.09
GCN1-202ENST00000547263 ABCA3Q99758 1704 aa15.6■□□□□ 0.09
GCN1-202ENST00000547263 MARF1Q9Y4F3 1742 aaKnown RBP15.6■□□□□ 0.09
GCN1-202ENST00000547263 CRYBG1Q9Y4K1 1723 aa15.6■□□□□ 0.09
GCN1-202ENST00000547263 PLEKHG3A1L390 1219 aa15.6■□□□□ 0.09
GCN1-202ENST00000547263 CARD11Q9BXL7 1154 aa15.6■□□□□ 0.09
GCN1-202ENST00000547263 CCDC61Q9Y6R9 512 aa15.59■□□□□ 0.09
GCN1-202ENST00000547263 KRT28Q7Z3Y7 464 aa15.58■□□□□ 0.08
GCN1-202ENST00000547263 PMFBP1Q8TBY8 1022 aa15.56■□□□□ 0.08
GCN1-202ENST00000547263 CCER1Q8TC90 406 aaPredicted RBP15.56■□□□□ 0.08
GCN1-202ENST00000547263 PUS7Q96PZ0 661 aaKnown RBP15.56■□□□□ 0.08
GCN1-202ENST00000547263 TESK2Q96S53 571 aa15.56■□□□□ 0.08
GCN1-202ENST00000547263 EVC2Q86UK5 1308 aa15.56■□□□□ 0.08
GCN1-202ENST00000547263 AKAP12Q02952 1782 aa15.56■□□□□ 0.08
GCN1-202ENST00000547263 BRD4O60885 1362 aaPredicted RBP15.55■□□□□ 0.08
GCN1-202ENST00000547263 XPCQ01831 940 aaPredicted RBP15.55■□□□□ 0.08
GCN1-202ENST00000547263 PSME1Q06323 249 aa15.55■□□□□ 0.08
GCN1-202ENST00000547263 PPIP5K1Q6PFW1 1433 aa15.54■□□□□ 0.08
GCN1-202ENST00000547263 SSH2Q76I76 1423 aa15.54■□□□□ 0.08
GCN1-202ENST00000547263 ARHGEF10O15013 1369 aa15.54■□□□□ 0.08
GCN1-202ENST00000547263 NRKQ7Z2Y5 1582 aa15.53■□□□□ 0.08
GCN1-202ENST00000547263 ILDR2Q71H61 639 aa15.53■□□□□ 0.08
GCN1-202ENST00000547263 CABP2Q9NPB3 220 aa15.53■□□□□ 0.08
GCN1-202ENST00000547263 CPSF1Q10570 1443 aaKnown RBP15.52■□□□□ 0.08
GCN1-202ENST00000547263 ATAD2Q6PL18 1390 aa15.52■□□□□ 0.08
GCN1-202ENST00000547263 ACEP12821 1306 aa15.52■□□□□ 0.08
GCN1-202ENST00000547263 MON2Q7Z3U7 1717 aa15.51■□□□□ 0.07
GCN1-202ENST00000547263 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.51■□□□□ 0.07
GCN1-202ENST00000547263 USP47Q96K76 1375 aa15.51■□□□□ 0.07
GCN1-202ENST00000547263 SRPK2P78362 688 aaKnown RBP15.51■□□□□ 0.07
GCN1-202ENST00000547263 CD163L1Q9NR16 1453 aa15.51■□□□□ 0.07
GCN1-202ENST00000547263 PHRF1Q9P1Y6 1649 aaKnown RBP15.5■□□□□ 0.07
GCN1-202ENST00000547263 ST20-MTHFSA0A0A6YYL1 179 aa15.5■□□□□ 0.07
GCN1-202ENST00000547263 NGDNQ8NEJ9 315 aaKnown RBP15.5■□□□□ 0.07
GCN1-202ENST00000547263 USP6P35125 1406 aa15.5■□□□□ 0.07
GCN1-202ENST00000547263 USP54Q70EL1 1684 aa15.49■□□□□ 0.07
GCN1-202ENST00000547263 SLC24A1O60721 1099 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms