RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 FAM160A2Q8N612 972 aaPredicted RBP13.02□□□□□ -0.33
CHPT1-203ENST00000546873 Q6ZNB5 142 aa13.01□□□□□ -0.33
CHPT1-203ENST00000546873 USB1Q9BQ65 265 aaKnown RBP13.01□□□□□ -0.33
CHPT1-203ENST00000546873 DIXDC1Q155Q3 683 aa13□□□□□ -0.33
CHPT1-203ENST00000546873 SPRYD7Q5W111 196 aa13□□□□□ -0.33
CHPT1-203ENST00000546873 PDZRN3Q9UPQ7 1066 aa13□□□□□ -0.33
CHPT1-203ENST00000546873 FCF1Q9Y324 198 aaKnown RBP13□□□□□ -0.33
CHPT1-203ENST00000546873 PARP9Q8IXQ6 854 aa12.99□□□□□ -0.33
CHPT1-203ENST00000546873 BEGAINQ9BUH8 593 aa12.99□□□□□ -0.33
CHPT1-203ENST00000546873 CUX2O14529 1486 aa12.98□□□□□ -0.33
CHPT1-203ENST00000546873 NRG2O14511 850 aaPredicted RBP12.98□□□□□ -0.33
CHPT1-203ENST00000546873 LIAT1Q6ZQX7 453 aa12.98□□□□□ -0.33
CHPT1-203ENST00000546873 ZNF598Q86UK7 904 aaKnown RBP12.98□□□□□ -0.33
CHPT1-203ENST00000546873 HLA-CQ95604 372 aa12.98□□□□□ -0.33
CHPT1-203ENST00000546873 SLC24A3Q9HC58 644 aa12.98□□□□□ -0.33
CHPT1-203ENST00000546873 ZBTB24O43167 697 aaPredicted RBP12.97□□□□□ -0.33
CHPT1-203ENST00000546873 FDX1P10109 184 aa12.97□□□□□ -0.33
CHPT1-203ENST00000546873 PRDM9Q9NQV7 894 aa12.97□□□□□ -0.33
CHPT1-203ENST00000546873 SCRIBQ14160 1630 aa12.96□□□□□ -0.33
CHPT1-203ENST00000546873 RPIAP49247 311 aa12.96□□□□□ -0.33
CHPT1-203ENST00000546873 ZNF697Q5TEC3 545 aa12.96□□□□□ -0.33
CHPT1-203ENST00000546873 SPIRE2Q8WWL2 714 aa12.96□□□□□ -0.33
CHPT1-203ENST00000546873 CD2BP2O95400 341 aaKnown RBP12.95□□□□□ -0.34
CHPT1-203ENST00000546873 GUCA2AQ02747 115 aa12.95□□□□□ -0.34
CHPT1-203ENST00000546873 PDE4DQ08499 809 aa12.94□□□□□ -0.34
CHPT1-203ENST00000546873 EMID1Q96A84 441 aaPredicted RBP12.94□□□□□ -0.34
CHPT1-203ENST00000546873 C6orf229H3BNL8 230 aa12.93□□□□□ -0.34
CHPT1-203ENST00000546873 MMP16P51512 607 aa12.93□□□□□ -0.34
CHPT1-203ENST00000546873 PLA2G2CQ5R387 149 aa12.93□□□□□ -0.34
CHPT1-203ENST00000546873 RETREG3Q86VR2 466 aa12.92□□□□□ -0.34
CHPT1-203ENST00000546873 DCAF1Q9Y4B6 1507 aa12.91□□□□□ -0.34
CHPT1-203ENST00000546873 DXOO77932 396 aaKnown RBP12.9□□□□□ -0.34
CHPT1-203ENST00000546873 MOXD2PA6NHM9 499 aa12.89□□□□□ -0.35
CHPT1-203ENST00000546873 SYMPKQ92797 1274 aaKnown RBP12.89□□□□□ -0.35
CHPT1-203ENST00000546873 TBC1D2Q9BYX2 928 aa12.89□□□□□ -0.35
CHPT1-203ENST00000546873 MS4A1P11836 297 aa12.88□□□□□ -0.35
CHPT1-203ENST00000546873 NDUFV2P19404 249 aa12.88□□□□□ -0.35
CHPT1-203ENST00000546873 CCDC24Q8N4L8 307 aa12.88□□□□□ -0.35
CHPT1-203ENST00000546873 JUNDP17535 347 aa12.87□□□□□ -0.35
CHPT1-203ENST00000546873 PRR20EP86478 221 aa12.87□□□□□ -0.35
CHPT1-203ENST00000546873 PRR20CP86479 221 aa12.87□□□□□ -0.35
CHPT1-203ENST00000546873 PRR20DP86480 221 aa12.87□□□□□ -0.35
CHPT1-203ENST00000546873 PRR20BP86481 221 aa12.87□□□□□ -0.35
CHPT1-203ENST00000546873 PRR20AP86496 221 aa12.87□□□□□ -0.35
CHPT1-203ENST00000546873 SPDYE5A6NIY4 337 aa12.86□□□□□ -0.35
CHPT1-203ENST00000546873 PCDHGC3Q9UN70 934 aa12.86□□□□□ -0.35
CHPT1-203ENST00000546873 GJA5P36382 358 aa12.85□□□□□ -0.35
CHPT1-203ENST00000546873 FOXC1Q12948 553 aa12.85□□□□□ -0.35
CHPT1-203ENST00000546873 TRAF7Q6Q0C0 670 aa12.85□□□□□ -0.35
CHPT1-203ENST00000546873 ERCC6Q03468 1493 aa12.85□□□□□ -0.35
CHPT1-203ENST00000546873 TNFRSF10AO00220 468 aa12.84□□□□□ -0.35
CHPT1-203ENST00000546873 MTMR2Q13614 643 aa12.84□□□□□ -0.35
CHPT1-203ENST00000546873 TRIM67Q6ZTA4 783 aa12.84□□□□□ -0.35
CHPT1-203ENST00000546873 PKDCCQ504Y2 493 aa12.82□□□□□ -0.36
CHPT1-203ENST00000546873 RSBN1LQ6PCB5 846 aaPredicted RBP12.82□□□□□ -0.36
CHPT1-203ENST00000546873 GDF9O60383 454 aa12.81□□□□□ -0.36
CHPT1-203ENST00000546873 TRIM32Q13049 653 aa12.81□□□□□ -0.36
CHPT1-203ENST00000546873 SPTLC1O15269 473 aa12.8□□□□□ -0.36
CHPT1-203ENST00000546873 RIC3Q7Z5B4 369 aa12.8□□□□□ -0.36
CHPT1-203ENST00000546873 PRR7Q8TB68 274 aa12.8□□□□□ -0.36
CHPT1-203ENST00000546873 NUDT12Q9BQG2 462 aa12.8□□□□□ -0.36
CHPT1-203ENST00000546873 DGAT1O75907 488 aa12.78□□□□□ -0.36
CHPT1-203ENST00000546873 RSPH6AQ9H0K4 717 aa12.78□□□□□ -0.36
CHPT1-203ENST00000546873 ZBTB3Q9H5J0 574 aa12.78□□□□□ -0.36
CHPT1-203ENST00000546873 FAM187AA6NFU0 413 aa12.77□□□□□ -0.37
CHPT1-203ENST00000546873 CYP4X1Q8N118 509 aa12.77□□□□□ -0.37
CHPT1-203ENST00000546873 CCNYL3P0C7X3 344 aa12.76□□□□□ -0.37
CHPT1-203ENST00000546873 PKD2L1Q9P0L9 805 aa12.76□□□□□ -0.37
CHPT1-203ENST00000546873 PTPRNQ16849 979 aa12.75□□□□□ -0.37
CHPT1-203ENST00000546873 CSPP1Q1MSJ5 1256 aa12.75□□□□□ -0.37
CHPT1-203ENST00000546873 PRPF38BQ5VTL8 546 aaKnown RBP12.75□□□□□ -0.37
CHPT1-203ENST00000546873 DESI1Q6ICB0 168 aa12.74□□□□□ -0.37
CHPT1-203ENST00000546873 PCDHB15Q9Y5E8 787 aa12.74□□□□□ -0.37
CHPT1-203ENST00000546873 NUTM2BA6NNL0 878 aaPredicted RBP12.73□□□□□ -0.37
CHPT1-203ENST00000546873 NUTM2EB1AL46 878 aaPredicted RBP12.73□□□□□ -0.37
CHPT1-203ENST00000546873 NUTM2DQ5VT03 806 aaPredicted RBP12.73□□□□□ -0.37
CHPT1-203ENST00000546873 MYSM1Q5VVJ2 828 aa12.73□□□□□ -0.37
CHPT1-203ENST00000546873 NUTM2AQ8IVF1 878 aaPredicted RBP12.73□□□□□ -0.37
CHPT1-203ENST00000546873 TTC24A2A3L6 582 aaPredicted RBP12.72□□□□□ -0.37
CHPT1-203ENST00000546873 WNT7AO00755 349 aa12.72□□□□□ -0.37
CHPT1-203ENST00000546873 WNT7BP56706 349 aa12.72□□□□□ -0.37
CHPT1-203ENST00000546873 HRCP23327 699 aa12.71□□□□□ -0.37
CHPT1-203ENST00000546873 CLK2P49760 499 aaKnown RBP12.69□□□□□ -0.38
CHPT1-203ENST00000546873 TUSC1Q2TAM9 212 aa12.69□□□□□ -0.38
CHPT1-203ENST00000546873 DDRGK1Q96HY6 314 aa12.69□□□□□ -0.38
CHPT1-203ENST00000546873 KDM4CQ9H3R0 1056 aa12.69□□□□□ -0.38
CHPT1-203ENST00000546873 ATP1B4Q9UN42 357 aaPredicted RBP12.69□□□□□ -0.38
CHPT1-203ENST00000546873 CABLES1Q8TDN4 633 aa12.68□□□□□ -0.38
CHPT1-203ENST00000546873 EVA1BQ9NVM1 165 aa12.68□□□□□ -0.38
CHPT1-203ENST00000546873 TOR4AQ9NXH8 423 aa12.68□□□□□ -0.38
CHPT1-203ENST00000546873 LIMD1Q9UGP4 676 aa12.68□□□□□ -0.38
CHPT1-203ENST00000546873 CTHP32929 405 aa12.67□□□□□ -0.38
CHPT1-203ENST00000546873 KCNH2Q12809 1159 aa12.67□□□□□ -0.38
CHPT1-203ENST00000546873 TSC1Q92574 1164 aa12.67□□□□□ -0.38
CHPT1-203ENST00000546873 RC3H1Q5TC82 1133 aaKnown RBP12.66□□□□□ -0.38
CHPT1-203ENST00000546873 PTCRAQ6ISU1 281 aaPredicted RBP12.66□□□□□ -0.38
CHPT1-203ENST00000546873 SNIP1Q8TAD8 396 aaKnown RBP12.66□□□□□ -0.38
CHPT1-203ENST00000546873 MRGPRX2Q96LB1 330 aa12.66□□□□□ -0.38
CHPT1-203ENST00000546873 GPBP1L1Q9HC44 474 aaPredicted RBP12.66□□□□□ -0.38
CHPT1-203ENST00000546873 POLR3EQ9NVU0 708 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms