RNA–Protein interactions for RNA: ENST00000546443.5

CALCOCO1-203, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-203ENST00000546443 SMG6Q86US8 1419 aaKnown RBP20.5■□□□□ 0.87
CALCOCO1-203ENST00000546443 SAFB2Q14151 953 aaKnown RBP eCLIP20.49■□□□□ 0.87
CALCOCO1-203ENST00000546443 POGKQ9P215 609 aa20.49■□□□□ 0.87
CALCOCO1-203ENST00000546443 CEBPAP49715 358 aaPredicted RBP20.48■□□□□ 0.87
CALCOCO1-203ENST00000546443 FKBP8Q14318 412 aa20.48■□□□□ 0.87
CALCOCO1-203ENST00000546443 CABP2Q9NPB3 220 aa20.48■□□□□ 0.87
CALCOCO1-203ENST00000546443 MINK1Q8N4C8 1332 aaPredicted RBP20.47■□□□□ 0.87
CALCOCO1-203ENST00000546443 METP08581 1390 aa20.47■□□□□ 0.87
CALCOCO1-203ENST00000546443 TECPR2O15040 1411 aa20.47■□□□□ 0.87
CALCOCO1-203ENST00000546443 SLIT1O75093 1534 aa20.47■□□□□ 0.87
CALCOCO1-203ENST00000546443 CPS1P31327 1500 aa20.47■□□□□ 0.87
CALCOCO1-203ENST00000546443 ATAD2Q6PL18 1390 aa20.47■□□□□ 0.87
CALCOCO1-203ENST00000546443 ARHGAP23Q9P227 1491 aa20.46■□□□□ 0.87
CALCOCO1-203ENST00000546443 NEFLP07196 543 aa20.46■□□□□ 0.87
CALCOCO1-203ENST00000546443 ADAMTS13Q76LX8 1427 aa20.45■□□□□ 0.86
CALCOCO1-203ENST00000546443 DNAJC5Q9H3Z4 198 aa20.45■□□□□ 0.86
CALCOCO1-203ENST00000546443 PLEKHG1Q9ULL1 1385 aa20.44■□□□□ 0.86
CALCOCO1-203ENST00000546443 PLEKHH1Q9ULM0 1364 aa20.44■□□□□ 0.86
CALCOCO1-203ENST00000546443 SIRT1Q96EB6 747 aa20.44■□□□□ 0.86
CALCOCO1-203ENST00000546443 MED14O60244 1454 aa20.43■□□□□ 0.86
CALCOCO1-203ENST00000546443 CD163L1Q9NR16 1453 aa20.43■□□□□ 0.86
CALCOCO1-203ENST00000546443 FAM135BQ49AJ0 1406 aa20.43■□□□□ 0.86
CALCOCO1-203ENST00000546443 SRPK2P78362 688 aaKnown RBP20.43■□□□□ 0.86
CALCOCO1-203ENST00000546443 NUDCQ9Y266 331 aa20.43■□□□□ 0.86
CALCOCO1-203ENST00000546443 NSD2O96028 1365 aa20.42■□□□□ 0.86
CALCOCO1-203ENST00000546443 ANKRD26Q9UPS8 1709 aa20.42■□□□□ 0.86
CALCOCO1-203ENST00000546443 LTKP29376 864 aa20.41■□□□□ 0.86
CALCOCO1-203ENST00000546443 WAPLQ7Z5K2 1190 aa20.41■□□□□ 0.86
CALCOCO1-203ENST00000546443 CDK19Q9BWU1 502 aa20.41■□□□□ 0.86
CALCOCO1-203ENST00000546443 A0A1W2PP64 1363 aa20.4■□□□□ 0.86
CALCOCO1-203ENST00000546443 RIMS1Q86UR5 1692 aaKnown RBP20.4■□□□□ 0.86
CALCOCO1-203ENST00000546443 CGNL1Q0VF96 1302 aa20.4■□□□□ 0.86
CALCOCO1-203ENST00000546443 ADAMTS8Q9UP79 889 aa20.4■□□□□ 0.86
CALCOCO1-203ENST00000546443 POLR3AO14802 1390 aaPredicted RBP20.39■□□□□ 0.85
CALCOCO1-203ENST00000546443 ADAMTSL3P82987 1691 aa20.38■□□□□ 0.85
CALCOCO1-203ENST00000546443 SHPRHQ149N8 1683 aa20.38■□□□□ 0.85
CALCOCO1-203ENST00000546443 SENP3-EIF4A1A0A087X0R7 540 aa20.37■□□□□ 0.85
CALCOCO1-203ENST00000546443 MORC1Q86VD1 984 aa20.37■□□□□ 0.85
CALCOCO1-203ENST00000546443 WDR43Q15061 677 aaKnown RBP eCLIP20.37■□□□□ 0.85
CALCOCO1-203ENST00000546443 PDE3BQ13370 1112 aa20.36■□□□□ 0.85
CALCOCO1-203ENST00000546443 TXNDC2Q86VQ3 553 aa20.36■□□□□ 0.85
CALCOCO1-203ENST00000546443 KIF20BQ96Q89 1820 aa20.35■□□□□ 0.85
CALCOCO1-203ENST00000546443 ADGRB2O60241 1585 aa20.35■□□□□ 0.85
CALCOCO1-203ENST00000546443 ATP7BP35670 1465 aa20.34■□□□□ 0.85
CALCOCO1-203ENST00000546443 TERF2IPQ9NYB0 399 aa20.34■□□□□ 0.85
CALCOCO1-203ENST00000546443 DIP2AQ14689 1571 aa20.34■□□□□ 0.85
CALCOCO1-203ENST00000546443 CEP170BQ9Y4F5 1589 aaPredicted RBP20.34■□□□□ 0.85
CALCOCO1-203ENST00000546443 BCANQ96GW7 911 aa20.32■□□□□ 0.84
CALCOCO1-203ENST00000546443 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.32■□□□□ 0.84
CALCOCO1-203ENST00000546443 EID1Q9Y6B2 187 aa20.32■□□□□ 0.84
CALCOCO1-203ENST00000546443 RNF123Q5XPI4 1314 aa20.32■□□□□ 0.84
CALCOCO1-203ENST00000546443 PTPRUQ92729 1446 aa20.32■□□□□ 0.84
CALCOCO1-203ENST00000546443 WASLO00401 505 aaPredicted RBP20.32■□□□□ 0.84
CALCOCO1-203ENST00000546443 THEMISQ8N1K5 641 aaPredicted RBP20.32■□□□□ 0.84
CALCOCO1-203ENST00000546443 ZNF142P52746 1687 aaPredicted RBP20.31■□□□□ 0.84
CALCOCO1-203ENST00000546443 ROBO2Q9HCK4 1378 aa20.31■□□□□ 0.84
CALCOCO1-203ENST00000546443 ERICH6BQ5W0A0 696 aa20.31■□□□□ 0.84
CALCOCO1-203ENST00000546443 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
CALCOCO1-203ENST00000546443 HDGFL2Q7Z4V5 671 aaPredicted RBP20.3■□□□□ 0.84
CALCOCO1-203ENST00000546443 CABP1Q9NZU7 370 aa20.3■□□□□ 0.84
CALCOCO1-203ENST00000546443 AKAP12Q02952 1782 aa20.29■□□□□ 0.84
CALCOCO1-203ENST00000546443 TBX22Q9Y458 520 aa20.28■□□□□ 0.84
CALCOCO1-203ENST00000546443 SALL2Q9Y467 1007 aaPredicted RBP20.28■□□□□ 0.84
CALCOCO1-203ENST00000546443 MON2Q7Z3U7 1717 aa20.28■□□□□ 0.84
CALCOCO1-203ENST00000546443 CPSF1Q10570 1443 aaKnown RBP20.27■□□□□ 0.84
CALCOCO1-203ENST00000546443 CDC42BPGQ6DT37 1551 aa20.27■□□□□ 0.84
CALCOCO1-203ENST00000546443 FYB1O15117 783 aa20.27■□□□□ 0.83
CALCOCO1-203ENST00000546443 IRX6P78412 446 aaPredicted RBP20.26■□□□□ 0.83
CALCOCO1-203ENST00000546443 ZNF521Q96K83 1311 aa20.26■□□□□ 0.83
CALCOCO1-203ENST00000546443 TOPAZ1Q8N9V7 1692 aa20.26■□□□□ 0.83
CALCOCO1-203ENST00000546443 XRN1Q8IZH2 1706 aaKnown RBP20.26■□□□□ 0.83
CALCOCO1-203ENST00000546443 ITSN1Q15811 1721 aa20.25■□□□□ 0.83
CALCOCO1-203ENST00000546443 PPIP5K1Q6PFW1 1433 aa20.25■□□□□ 0.83
CALCOCO1-203ENST00000546443 TNNT2P45379 298 aaPredicted RBP20.25■□□□□ 0.83
CALCOCO1-203ENST00000546443 MTHFSP49914 203 aa20.25■□□□□ 0.83
CALCOCO1-203ENST00000546443 SLC26A8Q96RN1 970 aa20.24■□□□□ 0.83
CALCOCO1-203ENST00000546443 PTCH1Q13635 1447 aa20.24■□□□□ 0.83
CALCOCO1-203ENST00000546443 NUDT16Q96DE0 195 aaKnown RBP20.23■□□□□ 0.83
CALCOCO1-203ENST00000546443 CDCA7LQ96GN5 454 aa20.23■□□□□ 0.83
CALCOCO1-203ENST00000546443 GGNBP2Q9H3C7 697 aa20.23■□□□□ 0.83
CALCOCO1-203ENST00000546443 COL3A1P02461 1466 aaPredicted RBP20.21■□□□□ 0.83
CALCOCO1-203ENST00000546443 EDC4Q6P2E9 1401 aaKnown RBP20.21■□□□□ 0.83
CALCOCO1-203ENST00000546443 PRR36Q9H6K5 1346 aa20.21■□□□□ 0.83
CALCOCO1-203ENST00000546443 CCDC146Q8IYE0 955 aa20.21■□□□□ 0.83
CALCOCO1-203ENST00000546443 CFAP53Q96M91 514 aa20.21■□□□□ 0.83
CALCOCO1-203ENST00000546443 SETD1BQ9UPS6 1966 aaKnown RBP20.2■□□□□ 0.82
CALCOCO1-203ENST00000546443 NGEFQ8N5V2 710 aa20.19■□□□□ 0.82
CALCOCO1-203ENST00000546443 AMOTL2Q9Y2J4 779 aa20.19■□□□□ 0.82
CALCOCO1-203ENST00000546443 CCDC61Q9Y6R9 512 aa20.19■□□□□ 0.82
CALCOCO1-203ENST00000546443 PIK3R4Q99570 1358 aa20.19■□□□□ 0.82
CALCOCO1-203ENST00000546443 IQSEC2Q5JU85 1478 aa20.19■□□□□ 0.82
CALCOCO1-203ENST00000546443 NRKQ7Z2Y5 1582 aa20.18■□□□□ 0.82
CALCOCO1-203ENST00000546443 APAF1O14727 1248 aa20.17■□□□□ 0.82
CALCOCO1-203ENST00000546443 PPP4R2Q9NY27 417 aa20.17■□□□□ 0.82
CALCOCO1-203ENST00000546443 RCAN3Q9UKA8 241 aa20.17■□□□□ 0.82
CALCOCO1-203ENST00000546443 PELP1Q8IZL8 1130 aaKnown RBP20.16■□□□□ 0.82
CALCOCO1-203ENST00000546443 NCKAP5LQ9HCH0 1330 aa20.15■□□□□ 0.82
CALCOCO1-203ENST00000546443 CHD2O14647 1828 aaKnown RBP20.15■□□□□ 0.82
CALCOCO1-203ENST00000546443 PNPLA6Q8IY17 1366 aa20.14■□□□□ 0.81
CALCOCO1-203ENST00000546443 GOLGA2Q08379 1002 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms