RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 ST20-MTHFSA0A0A6YYL1 179 aa23.08■■□□□ 1.28
LIMS2-217ENST00000545738 CERKQ8TCT0 537 aa23.08■■□□□ 1.28
LIMS2-217ENST00000545738 MINK1Q8N4C8 1332 aaPredicted RBP23.07■■□□□ 1.28
LIMS2-217ENST00000545738 ADGRB2O60241 1585 aa23.07■■□□□ 1.28
LIMS2-217ENST00000545738 ZEB1P37275 1124 aaPredicted RBP23.05■■□□□ 1.28
LIMS2-217ENST00000545738 EIF3AQ14152 1382 aaKnown RBP23.05■■□□□ 1.28
LIMS2-217ENST00000545738 TESK2Q96S53 571 aa23.05■■□□□ 1.28
LIMS2-217ENST00000545738 TULP4Q9NRJ4 1543 aa23.04■■□□□ 1.28
LIMS2-217ENST00000545738 CDC42BPGQ6DT37 1551 aa23.04■■□□□ 1.28
LIMS2-217ENST00000545738 C14orf37Q86TY3 774 aa23.03■■□□□ 1.28
LIMS2-217ENST00000545738 HSPA5P11021 654 aaKnown RBP23.02■■□□□ 1.28
LIMS2-217ENST00000545738 C19orf44Q9H6X5 657 aa23.02■■□□□ 1.28
LIMS2-217ENST00000545738 MSH6P52701 1360 aa23.01■■□□□ 1.27
LIMS2-217ENST00000545738 IQSEC2Q5JU85 1478 aa23.01■■□□□ 1.27
LIMS2-217ENST00000545738 FMN2Q9NZ56 1722 aa23.01■■□□□ 1.27
LIMS2-217ENST00000545738 DCCP43146 1447 aa22.99■■□□□ 1.27
LIMS2-217ENST00000545738 USP32Q8NFA0 1604 aa22.99■■□□□ 1.27
LIMS2-217ENST00000545738 SBNO2Q9Y2G9 1366 aa22.99■■□□□ 1.27
LIMS2-217ENST00000545738 EIF4G2P78344 907 aaKnown RBP eCLIP22.98■■□□□ 1.27
LIMS2-217ENST00000545738 RGPD8O14715 1765 aaPredicted RBP22.98■■□□□ 1.27
LIMS2-217ENST00000545738 MST1RQ04912 1400 aa22.97■■□□□ 1.27
LIMS2-217ENST00000545738 NUTM2FA1L443 756 aa22.96■■□□□ 1.27
LIMS2-217ENST00000545738 DISP3Q9P2K9 1392 aa22.96■■□□□ 1.27
LIMS2-217ENST00000545738 WASLO00401 505 aaPredicted RBP22.96■■□□□ 1.27
LIMS2-217ENST00000545738 PRR36Q9H6K5 1346 aa22.95■■□□□ 1.26
LIMS2-217ENST00000545738 CDK19Q9BWU1 502 aa22.94■■□□□ 1.26
LIMS2-217ENST00000545738 ATP7BP35670 1465 aa22.93■■□□□ 1.26
LIMS2-217ENST00000545738 C1orf167Q5SNV9 1468 aa22.92■■□□□ 1.26
LIMS2-217ENST00000545738 ATF3P18847 181 aa22.92■■□□□ 1.26
LIMS2-217ENST00000545738 CADPS2Q86UW7 1296 aa22.92■■□□□ 1.26
LIMS2-217ENST00000545738 C11orf95C9JLR9 678 aaPredicted RBP22.91■■□□□ 1.26
LIMS2-217ENST00000545738 CABP2Q9NPB3 220 aa22.91■■□□□ 1.26
LIMS2-217ENST00000545738 TOPAZ1Q8N9V7 1692 aa22.89■■□□□ 1.26
LIMS2-217ENST00000545738 UBAP1LF5GYI3 381 aa22.89■■□□□ 1.26
LIMS2-217ENST00000545738 SLAIN2Q9P270 581 aa22.89■■□□□ 1.26
LIMS2-217ENST00000545738 EVC2Q86UK5 1308 aa22.88■■□□□ 1.25
LIMS2-217ENST00000545738 ORAI2Q96SN7 254 aa22.88■■□□□ 1.25
LIMS2-217ENST00000545738 ROBO1Q9Y6N7 1651 aa22.86■■□□□ 1.25
LIMS2-217ENST00000545738 SRPK2P78362 688 aaKnown RBP22.86■■□□□ 1.25
LIMS2-217ENST00000545738 ANKARQ7Z5J8 1434 aa22.86■■□□□ 1.25
LIMS2-217ENST00000545738 NUDT16Q96DE0 195 aaKnown RBP22.85■■□□□ 1.25
LIMS2-217ENST00000545738 TOM1O60784 492 aa22.84■■□□□ 1.25
LIMS2-217ENST00000545738 BRINP3Q76B58 766 aa22.84■■□□□ 1.25
LIMS2-217ENST00000545738 PIP4K2BP78356 416 aa22.83■■□□□ 1.25
LIMS2-217ENST00000545738 TMF1P82094 1093 aa22.82■■□□□ 1.24
LIMS2-217ENST00000545738 MYOM1P52179 1685 aa22.82■■□□□ 1.24
LIMS2-217ENST00000545738 ITSN1Q15811 1721 aa22.81■■□□□ 1.24
LIMS2-217ENST00000545738 DDX17Q92841 729 aaKnown RBP22.81■■□□□ 1.24
LIMS2-217ENST00000545738 ESCO1Q5FWF5 840 aa22.8■■□□□ 1.24
LIMS2-217ENST00000545738 PPIP5K1Q6PFW1 1433 aa22.79■■□□□ 1.24
LIMS2-217ENST00000545738 PMFBP1Q8TBY8 1022 aa22.79■■□□□ 1.24
LIMS2-217ENST00000545738 KIF7Q2M1P5 1343 aa22.78■■□□□ 1.24
LIMS2-217ENST00000545738 CCDC61Q9Y6R9 512 aa22.78■■□□□ 1.24
LIMS2-217ENST00000545738 NHSL1Q5SYE7 1610 aa22.77■■□□□ 1.24
LIMS2-217ENST00000545738 SCAF1Q9H7N4 1312 aaKnown RBP22.77■■□□□ 1.24
LIMS2-217ENST00000545738 CABP1Q9NZU7 370 aa22.77■■□□□ 1.23
LIMS2-217ENST00000545738 CD163L1Q9NR16 1453 aa22.76■■□□□ 1.23
LIMS2-217ENST00000545738 ATAD2Q6PL18 1390 aa22.76■■□□□ 1.23
LIMS2-217ENST00000545738 WASHC2AQ641Q2 1341 aa22.76■■□□□ 1.23
LIMS2-217ENST00000545738 KIF1AQ12756 1690 aa22.76■■□□□ 1.23
LIMS2-217ENST00000545738 PHF8Q9UPP1 1060 aa22.76■■□□□ 1.23
LIMS2-217ENST00000545738 SLC12A5Q9H2X9 1139 aa22.75■■□□□ 1.23
LIMS2-217ENST00000545738 PUS7Q96PZ0 661 aaKnown RBP22.74■■□□□ 1.23
LIMS2-217ENST00000545738 FOXO3O43524 673 aa22.74■■□□□ 1.23
LIMS2-217ENST00000545738 PLEKHG3A1L390 1219 aa22.73■■□□□ 1.23
LIMS2-217ENST00000545738 SLC24A1O60721 1099 aa22.73■■□□□ 1.23
LIMS2-217ENST00000545738 AHDC1Q5TGY3 1603 aaPredicted RBP22.72■■□□□ 1.23
LIMS2-217ENST00000545738 XPCQ01831 940 aaPredicted RBP22.72■■□□□ 1.23
LIMS2-217ENST00000545738 POLR3GLQ9BT43 218 aa22.72■■□□□ 1.23
LIMS2-217ENST00000545738 POLR3AO14802 1390 aaPredicted RBP22.72■■□□□ 1.23
LIMS2-217ENST00000545738 CCDC7Q96M83 1385 aa22.72■■□□□ 1.23
LIMS2-217ENST00000545738 AKAP12Q02952 1782 aa22.71■■□□□ 1.23
LIMS2-217ENST00000545738 ACEP12821 1306 aa22.71■■□□□ 1.23
LIMS2-217ENST00000545738 PXDNQ92626 1479 aa22.71■■□□□ 1.23
LIMS2-217ENST00000545738 TMC1Q8TDI8 760 aa22.7■■□□□ 1.22
LIMS2-217ENST00000545738 CPSF1Q10570 1443 aaKnown RBP22.69■■□□□ 1.22
LIMS2-217ENST00000545738 COL16A1Q07092 1604 aaPredicted RBP22.69■■□□□ 1.22
LIMS2-217ENST00000545738 FBXO41Q8TF61 875 aa22.68■■□□□ 1.22
LIMS2-217ENST00000545738 PHLPP1O60346 1717 aa22.68■■□□□ 1.22
LIMS2-217ENST00000545738 TRPM3Q9HCF6 1732 aaPredicted RBP22.68■■□□□ 1.22
LIMS2-217ENST00000545738 CDCA8Q53HL2 280 aa22.68■■□□□ 1.22
LIMS2-217ENST00000545738 A0A1W2PP64 1363 aa22.67■■□□□ 1.22
LIMS2-217ENST00000545738 MON2Q7Z3U7 1717 aa22.67■■□□□ 1.22
LIMS2-217ENST00000545738 NRKQ7Z2Y5 1582 aa22.67■■□□□ 1.22
LIMS2-217ENST00000545738 NGDNQ8NEJ9 315 aaKnown RBP22.65■■□□□ 1.22
LIMS2-217ENST00000545738 SOS2Q07890 1332 aaPredicted RBP22.65■■□□□ 1.22
LIMS2-217ENST00000545738 HSPA1LP34931 641 aa22.65■■□□□ 1.22
LIMS2-217ENST00000545738 NPHP3Q7Z494 1330 aa22.64■■□□□ 1.21
LIMS2-217ENST00000545738 NINLQ9Y2I6 1382 aa22.64■■□□□ 1.21
LIMS2-217ENST00000545738 USP6P35125 1406 aa22.64■■□□□ 1.21
LIMS2-217ENST00000545738 SSH2Q76I76 1423 aa22.64■■□□□ 1.21
LIMS2-217ENST00000545738 ANKRD36BQ8N2N9 1353 aa22.62■■□□□ 1.21
LIMS2-217ENST00000545738 KRT28Q7Z3Y7 464 aa22.62■■□□□ 1.21
LIMS2-217ENST00000545738 CARD14Q9BXL6 1004 aa22.61■■□□□ 1.21
LIMS2-217ENST00000545738 PSME1Q06323 249 aa22.6■■□□□ 1.21
LIMS2-217ENST00000545738 ALS2Q96Q42 1657 aa22.6■■□□□ 1.21
LIMS2-217ENST00000545738 KTN1Q86UP2 1357 aaKnown RBP22.6■■□□□ 1.21
LIMS2-217ENST00000545738 PANK3Q9H999 370 aa22.57■■□□□ 1.2
LIMS2-217ENST00000545738 PIK3C2AO00443 1686 aa22.57■■□□□ 1.2
LIMS2-217ENST00000545738 ZNF316A6NFI3 1004 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms