RNA–Protein interactions for RNA: ENST00000544299.5

CHERP-202, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-202ENST00000544299 WAPLQ7Z5K2 1190 aa24.84■■□□□ 1.57
CHERP-202ENST00000544299 MINK1Q8N4C8 1332 aaPredicted RBP24.84■■□□□ 1.57
CHERP-202ENST00000544299 ROBO2Q9HCK4 1378 aa24.81■■□□□ 1.56
CHERP-202ENST00000544299 XRN1Q8IZH2 1706 aaKnown RBP24.8■■□□□ 1.56
CHERP-202ENST00000544299 KDM4FA0A1W2PPD8 638 aa24.8■■□□□ 1.56
CHERP-202ENST00000544299 ANKLE2Q86XL3 938 aa24.8■■□□□ 1.56
CHERP-202ENST00000544299 CABP2Q9NPB3 220 aa24.78■■□□□ 1.56
CHERP-202ENST00000544299 YTHDC1Q96MU7 727 aaKnown RBP24.77■■□□□ 1.56
CHERP-202ENST00000544299 PARD3Q8TEW0 1356 aa24.76■■□□□ 1.55
CHERP-202ENST00000544299 CCDC184Q52MB2 194 aa24.76■■□□□ 1.55
CHERP-202ENST00000544299 KTN1Q86UP2 1357 aaKnown RBP24.76■■□□□ 1.55
CHERP-202ENST00000544299 CNGB1Q14028 1251 aaPredicted RBP24.75■■□□□ 1.55
CHERP-202ENST00000544299 PTCH1Q13635 1447 aa24.75■■□□□ 1.55
CHERP-202ENST00000544299 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.75■■□□□ 1.55
CHERP-202ENST00000544299 SLC12A5Q9H2X9 1139 aa24.74■■□□□ 1.55
CHERP-202ENST00000544299 PIK3R4Q99570 1358 aa24.74■■□□□ 1.55
CHERP-202ENST00000544299 ADGRB2O60241 1585 aa24.74■■□□□ 1.55
CHERP-202ENST00000544299 AMER1Q5JTC6 1135 aaPredicted RBP24.73■■□□□ 1.55
CHERP-202ENST00000544299 CARD14Q9BXL6 1004 aa24.73■■□□□ 1.55
CHERP-202ENST00000544299 NPHP4O75161 1426 aaPredicted RBP24.72■■□□□ 1.55
CHERP-202ENST00000544299 ATAD2Q6PL18 1390 aa24.72■■□□□ 1.55
CHERP-202ENST00000544299 RALBP1Q15311 655 aa24.72■■□□□ 1.55
CHERP-202ENST00000544299 CDK19Q9BWU1 502 aa24.72■■□□□ 1.55
CHERP-202ENST00000544299 AMOTL2Q9Y2J4 779 aa24.72■■□□□ 1.55
CHERP-202ENST00000544299 SRPK2P78362 688 aaKnown RBP24.72■■□□□ 1.55
CHERP-202ENST00000544299 CHD2O14647 1828 aaKnown RBP24.71■■□□□ 1.55
CHERP-202ENST00000544299 NPC1L1Q9UHC9 1359 aa24.7■■□□□ 1.55
CHERP-202ENST00000544299 NINLQ9Y2I6 1382 aa24.7■■□□□ 1.55
CHERP-202ENST00000544299 TMC1Q8TDI8 760 aa24.7■■□□□ 1.55
CHERP-202ENST00000544299 KNSTRNQ9Y448 316 aa24.7■■□□□ 1.55
CHERP-202ENST00000544299 CC2D1BQ5T0F9 858 aaKnown RBP24.69■■□□□ 1.54
CHERP-202ENST00000544299 USP32Q8NFA0 1604 aa24.68■■□□□ 1.54
CHERP-202ENST00000544299 ANKRD36BQ8N2N9 1353 aa24.68■■□□□ 1.54
CHERP-202ENST00000544299 MYBBP1AQ9BQG0 1328 aaKnown RBP24.68■■□□□ 1.54
CHERP-202ENST00000544299 NCKAP5LQ9HCH0 1330 aa24.68■■□□□ 1.54
CHERP-202ENST00000544299 WASLO00401 505 aaPredicted RBP24.67■■□□□ 1.54
CHERP-202ENST00000544299 CD163L1Q9NR16 1453 aa24.67■■□□□ 1.54
CHERP-202ENST00000544299 NSD3Q9BZ95 1437 aa24.66■■□□□ 1.54
CHERP-202ENST00000544299 MRS2Q9HD23 443 aa24.65■■□□□ 1.54
CHERP-202ENST00000544299 KCNA6P17658 529 aa24.64■■□□□ 1.53
CHERP-202ENST00000544299 GTF3C3Q9Y5Q9 886 aa24.63■■□□□ 1.53
CHERP-202ENST00000544299 A0A1W2PP64 1363 aa24.62■■□□□ 1.53
CHERP-202ENST00000544299 ATP7BP35670 1465 aa24.61■■□□□ 1.53
CHERP-202ENST00000544299 LMTK3Q96Q04 1460 aa24.61■■□□□ 1.53
CHERP-202ENST00000544299 BRD4O60885 1362 aaPredicted RBP24.6■■□□□ 1.53
CHERP-202ENST00000544299 NWD1Q149M9 1564 aa24.6■■□□□ 1.53
CHERP-202ENST00000544299 TOPAZ1Q8N9V7 1692 aa24.59■■□□□ 1.53
CHERP-202ENST00000544299 PRR36Q9H6K5 1346 aa24.59■■□□□ 1.53
CHERP-202ENST00000544299 NLRP13Q86W25 1043 aa24.57■■□□□ 1.52
CHERP-202ENST00000544299 CABP1Q9NZU7 370 aa24.57■■□□□ 1.52
CHERP-202ENST00000544299 NUDT16Q96DE0 195 aaKnown RBP24.56■■□□□ 1.52
CHERP-202ENST00000544299 PPIP5K1Q6PFW1 1433 aa24.56■■□□□ 1.52
CHERP-202ENST00000544299 HSPA2P54652 639 aa24.55■■□□□ 1.52
CHERP-202ENST00000544299 CDC42BPGQ6DT37 1551 aa24.55■■□□□ 1.52
CHERP-202ENST00000544299 TERF2IPQ9NYB0 399 aa24.54■■□□□ 1.52
CHERP-202ENST00000544299 NALCNQ8IZF0 1738 aa24.54■■□□□ 1.52
CHERP-202ENST00000544299 CPSF1Q10570 1443 aaKnown RBP24.53■■□□□ 1.52
CHERP-202ENST00000544299 PPP2R1AP30153 589 aa24.52■■□□□ 1.52
CHERP-202ENST00000544299 CGNL1Q0VF96 1302 aa24.52■■□□□ 1.52
CHERP-202ENST00000544299 AKAP12Q02952 1782 aa24.51■■□□□ 1.51
CHERP-202ENST00000544299 CCDC61Q9Y6R9 512 aa24.51■■□□□ 1.51
CHERP-202ENST00000544299 NSD2O96028 1365 aa24.5■■□□□ 1.51
CHERP-202ENST00000544299 MON2Q7Z3U7 1717 aa24.5■■□□□ 1.51
CHERP-202ENST00000544299 FMN2Q9NZ56 1722 aa24.5■■□□□ 1.51
CHERP-202ENST00000544299 HDGFL2Q7Z4V5 671 aaPredicted RBP24.5■■□□□ 1.51
CHERP-202ENST00000544299 PNISRQ8TF01 805 aaKnown RBP24.5■■□□□ 1.51
CHERP-202ENST00000544299 STRCQ7RTU9 1775 aa24.5■■□□□ 1.51
CHERP-202ENST00000544299 FAM9BQ8IZU0 186 aa24.49■■□□□ 1.51
CHERP-202ENST00000544299 ITSN1Q15811 1721 aa24.49■■□□□ 1.51
CHERP-202ENST00000544299 ANKRD26Q9UPS8 1709 aa24.49■■□□□ 1.51
CHERP-202ENST00000544299 NKTRP30414 1462 aaKnown RBP24.48■■□□□ 1.51
CHERP-202ENST00000544299 KIF20BQ96Q89 1820 aa24.47■■□□□ 1.51
CHERP-202ENST00000544299 STRCP1A6NGW2 1772 aa24.46■■□□□ 1.51
CHERP-202ENST00000544299 RGPD8O14715 1765 aaPredicted RBP24.46■■□□□ 1.51
CHERP-202ENST00000544299 ADGRL3Q9HAR2 1447 aa24.45■■□□□ 1.51
CHERP-202ENST00000544299 ANKARQ7Z5J8 1434 aa24.44■■□□□ 1.5
CHERP-202ENST00000544299 EDC4Q6P2E9 1401 aaKnown RBP24.44■■□□□ 1.5
CHERP-202ENST00000544299 PLEKHG3A1L390 1219 aa24.43■■□□□ 1.5
CHERP-202ENST00000544299 NUTM2FA1L443 756 aa24.43■■□□□ 1.5
CHERP-202ENST00000544299 MORC1Q86VD1 984 aa24.43■■□□□ 1.5
CHERP-202ENST00000544299 NRKQ7Z2Y5 1582 aa24.42■■□□□ 1.5
CHERP-202ENST00000544299 FYB1O15117 783 aa24.42■■□□□ 1.5
CHERP-202ENST00000544299 RBM33Q96EV2 1170 aaKnown RBP24.42■■□□□ 1.5
CHERP-202ENST00000544299 GGNBP2Q9H3C7 697 aa24.39■■□□□ 1.49
CHERP-202ENST00000544299 HNRNPUQ00839 825 aaKnown RBP eCLIP24.38■■□□□ 1.49
CHERP-202ENST00000544299 ACEP12821 1306 aa24.37■■□□□ 1.49
CHERP-202ENST00000544299 POLR3AO14802 1390 aaPredicted RBP24.36■■□□□ 1.49
CHERP-202ENST00000544299 USP6P35125 1406 aa24.35■■□□□ 1.49
CHERP-202ENST00000544299 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.35■■□□□ 1.49
CHERP-202ENST00000544299 ZNF692Q9BU19 519 aaPredicted RBP24.35■■□□□ 1.49
CHERP-202ENST00000544299 PROSER2Q86WR7 435 aaPredicted RBP24.34■■□□□ 1.49
CHERP-202ENST00000544299 SSH2Q76I76 1423 aa24.34■■□□□ 1.49
CHERP-202ENST00000544299 TNNT2P45379 298 aaPredicted RBP24.34■■□□□ 1.49
CHERP-202ENST00000544299 INSRP06213 1382 aa24.32■■□□□ 1.48
CHERP-202ENST00000544299 NME9Q86XW9 330 aa24.31■■□□□ 1.48
CHERP-202ENST00000544299 PMFBP1Q8TBY8 1022 aa24.31■■□□□ 1.48
CHERP-202ENST00000544299 BLMP54132 1417 aaPredicted RBP24.31■■□□□ 1.48
CHERP-202ENST00000544299 SHPRHQ149N8 1683 aa24.3■■□□□ 1.48
CHERP-202ENST00000544299 TTC21BQ7Z4L5 1316 aa24.3■■□□□ 1.48
CHERP-202ENST00000544299 ZRANB1Q9UGI0 708 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms