RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 MYOM1P52179 1685 aa22.99■■□□□ 1.27
CCT4-204ENST00000544079 HS1BP3Q53T59 392 aa22.98■■□□□ 1.27
CCT4-204ENST00000544079 GAS2L3Q86XJ1 694 aa22.98■■□□□ 1.27
CCT4-204ENST00000544079 MTERF4Q7Z6M4 381 aaKnown RBP22.96■■□□□ 1.27
CCT4-204ENST00000544079 IQGAP3Q86VI3 1631 aa22.96■■□□□ 1.27
CCT4-204ENST00000544079 RARSP54136 660 aaKnown RBP22.96■■□□□ 1.27
CCT4-204ENST00000544079 GRIN2AQ12879 1464 aa22.95■■□□□ 1.26
CCT4-204ENST00000544079 RAB3GAP1Q15042 981 aa22.94■■□□□ 1.26
CCT4-204ENST00000544079 RGL3Q3MIN7 710 aa22.94■■□□□ 1.26
CCT4-204ENST00000544079 TNPO1Q92973 898 aaKnown RBP22.94■■□□□ 1.26
CCT4-204ENST00000544079 RBM25P49756 843 aaKnown RBP22.94■■□□□ 1.26
CCT4-204ENST00000544079 WWC1Q8IX03 1113 aa22.94■■□□□ 1.26
CCT4-204ENST00000544079 ANP32BQ92688 251 aaKnown RBP22.94■■□□□ 1.26
CCT4-204ENST00000544079 DMRT2Q9Y5R5 561 aa22.94■■□□□ 1.26
CCT4-204ENST00000544079 RIPK4P57078 832 aa22.93■■□□□ 1.26
CCT4-204ENST00000544079 KANK1Q14678 1352 aa22.92■■□□□ 1.26
CCT4-204ENST00000544079 ARHGAP31Q2M1Z3 1444 aa22.92■■□□□ 1.26
CCT4-204ENST00000544079 MSNP26038 577 aaKnown RBP22.91■■□□□ 1.26
CCT4-204ENST00000544079 MFAP1P55081 439 aaKnown RBP22.91■■□□□ 1.26
CCT4-204ENST00000544079 RSPH4AQ5TD94 716 aa22.91■■□□□ 1.26
CCT4-204ENST00000544079 POLR3AO14802 1390 aaPredicted RBP22.9■■□□□ 1.26
CCT4-204ENST00000544079 MAST1Q9Y2H9 1570 aa22.9■■□□□ 1.26
CCT4-204ENST00000544079 MADDQ8WXG6 1647 aa22.9■■□□□ 1.26
CCT4-204ENST00000544079 CLEC17AQ6ZS10 378 aa22.9■■□□□ 1.26
CCT4-204ENST00000544079 SMAP1Q8IYB5 467 aaPredicted RBP22.9■■□□□ 1.26
CCT4-204ENST00000544079 NASPP49321 788 aaPredicted RBP22.89■■□□□ 1.26
CCT4-204ENST00000544079 FBLN2P98095 1184 aa22.89■■□□□ 1.26
CCT4-204ENST00000544079 PLB1Q6P1J6 1458 aa22.89■■□□□ 1.25
CCT4-204ENST00000544079 MAGI1Q96QZ7 1491 aaPredicted RBP22.89■■□□□ 1.25
CCT4-204ENST00000544079 SCAF11Q99590 1463 aaKnown RBP22.89■■□□□ 1.25
CCT4-204ENST00000544079 KDM5AP29375 1690 aaKnown RBP22.88■■□□□ 1.25
CCT4-204ENST00000544079 CYB5RLQ6IPT4 315 aa22.88■■□□□ 1.25
CCT4-204ENST00000544079 NCBP3Q53F19 620 aaKnown RBP22.88■■□□□ 1.25
CCT4-204ENST00000544079 ZNF500O60304 480 aaPredicted RBP22.87■■□□□ 1.25
CCT4-204ENST00000544079 RLBP1P12271 317 aa22.87■■□□□ 1.25
CCT4-204ENST00000544079 WDR63Q8IWG1 891 aa22.87■■□□□ 1.25
CCT4-204ENST00000544079 PHF23Q9BUL5 403 aaPredicted RBP22.87■■□□□ 1.25
CCT4-204ENST00000544079 HDAC1Q13547 482 aaPredicted RBP22.86■■□□□ 1.25
CCT4-204ENST00000544079 STAC3Q96MF2 364 aa22.86■■□□□ 1.25
CCT4-204ENST00000544079 MVPQ14764 893 aaKnown RBP22.85■■□□□ 1.25
CCT4-204ENST00000544079 IQSEC2Q5JU85 1478 aa22.85■■□□□ 1.25
CCT4-204ENST00000544079 SLC24A1O60721 1099 aa22.85■■□□□ 1.25
CCT4-204ENST00000544079 ABCA8O94911 1581 aa22.85■■□□□ 1.25
CCT4-204ENST00000544079 DUOX2Q9NRD8 1548 aa22.85■■□□□ 1.25
CCT4-204ENST00000544079 GOLGA6L22H0YM25 854 aa22.84■■□□□ 1.25
CCT4-204ENST00000544079 KLHL40Q2TBA0 621 aa22.84■■□□□ 1.25
CCT4-204ENST00000544079 TTC37Q6PGP7 1564 aa22.83■■□□□ 1.25
CCT4-204ENST00000544079 PLEKHD1A6NEE1 506 aa22.82■■□□□ 1.24
CCT4-204ENST00000544079 NOL7Q9UMY1 257 aaKnown RBP22.82■■□□□ 1.24
CCT4-204ENST00000544079 CEP152O94986 1710 aa22.82■■□□□ 1.24
CCT4-204ENST00000544079 DYNC1I1O14576 645 aa22.82■■□□□ 1.24
CCT4-204ENST00000544079 HSP90AB1P08238 724 aaKnown RBP22.82■■□□□ 1.24
CCT4-204ENST00000544079 CCDC27Q2M243 656 aa22.82■■□□□ 1.24
CCT4-204ENST00000544079 SHPRHQ149N8 1683 aa22.81■■□□□ 1.24
CCT4-204ENST00000544079 MCM5P33992 734 aa22.81■■□□□ 1.24
CCT4-204ENST00000544079 ZNF445P59923 1031 aa22.81■■□□□ 1.24
CCT4-204ENST00000544079 CSPP1Q1MSJ5 1256 aa22.81■■□□□ 1.24
CCT4-204ENST00000544079 SPHKAPQ2M3C7 1700 aa22.8■■□□□ 1.24
CCT4-204ENST00000544079 SAMD9LQ8IVG5 1584 aa22.8■■□□□ 1.24
CCT4-204ENST00000544079 CT47B1P0C2W7 299 aaPredicted RBP22.79■■□□□ 1.24
CCT4-204ENST00000544079 RUNDC1Q96C34 613 aa22.79■■□□□ 1.24
CCT4-204ENST00000544079 KIAA1210Q9ULL0 1709 aa22.78■■□□□ 1.24
CCT4-204ENST00000544079 PDLIM2Q96JY6 352 aa22.78■■□□□ 1.24
CCT4-204ENST00000544079 HNRNPMP52272 730 aaKnown RBP eCLIP22.78■■□□□ 1.24
CCT4-204ENST00000544079 RBM10P98175 930 aaKnown RBP22.77■■□□□ 1.24
CCT4-204ENST00000544079 ZKSCAN2Q63HK3 967 aa22.77■■□□□ 1.24
CCT4-204ENST00000544079 PREX2Q70Z35 1606 aa22.77■■□□□ 1.24
CCT4-204ENST00000544079 R3HCC1Q9Y3T6 440 aaKnown RBP22.76■■□□□ 1.23
CCT4-204ENST00000544079 UTP14CQ5TAP6 766 aaKnown RBP22.75■■□□□ 1.23
CCT4-204ENST00000544079 FAM13BQ9NYF5 915 aa22.75■■□□□ 1.23
CCT4-204ENST00000544079 TNNQ9UQP3 1299 aa22.75■■□□□ 1.23
CCT4-204ENST00000544079 DZIP1LQ8IYY4 767 aaKnown RBP22.75■■□□□ 1.23
CCT4-204ENST00000544079 CARMIL2Q6F5E8 1435 aa22.74■■□□□ 1.23
CCT4-204ENST00000544079 UQCRHLA0A096LP55 91 aa22.73■■□□□ 1.23
CCT4-204ENST00000544079 UQCRHP07919 91 aa22.73■■□□□ 1.23
CCT4-204ENST00000544079 KIF16BQ96L93 1317 aa22.73■■□□□ 1.23
CCT4-204ENST00000544079 K7ELQ4 463 aaPredicted RBP22.73■■□□□ 1.23
CCT4-204ENST00000544079 CDC42BPBQ9Y5S2 1711 aa22.72■■□□□ 1.23
CCT4-204ENST00000544079 ATP10BO94823 1461 aa22.72■■□□□ 1.23
CCT4-204ENST00000544079 DDX19BQ9UMR2 479 aa22.71■■□□□ 1.23
CCT4-204ENST00000544079 DDX49Q9Y6V7 483 aaKnown RBP22.71■■□□□ 1.23
CCT4-204ENST00000544079 TRHP20396 242 aaPredicted RBP22.71■■□□□ 1.23
CCT4-204ENST00000544079 FTSJ3Q8IY81 847 aaKnown RBP22.71■■□□□ 1.23
CCT4-204ENST00000544079 ZKSCAN5Q9Y2L8 839 aa22.7■■□□□ 1.22
CCT4-204ENST00000544079 KIF2CQ99661 725 aa22.7■■□□□ 1.22
CCT4-204ENST00000544079 BAG4O95429 457 aaKnown RBP22.69■■□□□ 1.22
CCT4-204ENST00000544079 SASS6Q6UVJ0 657 aa22.69■■□□□ 1.22
CCT4-204ENST00000544079 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.69■■□□□ 1.22
CCT4-204ENST00000544079 ADGRL1O94910 1474 aa22.69■■□□□ 1.22
CCT4-204ENST00000544079 TCP11L2Q8N4U5 519 aa22.69■■□□□ 1.22
CCT4-204ENST00000544079 CHMP7Q8WUX9 453 aaPredicted RBP22.69■■□□□ 1.22
CCT4-204ENST00000544079 CFAP74Q9C0B2 1584 aa22.68■■□□□ 1.22
CCT4-204ENST00000544079 BMP2KLQ5H9B9 411 aa22.68■■□□□ 1.22
CCT4-204ENST00000544079 REREQ9P2R6 1566 aa22.68■■□□□ 1.22
CCT4-204ENST00000544079 ERVK-7P63135 1459 aa22.67■■□□□ 1.22
CCT4-204ENST00000544079 NUCB1Q02818 461 aa22.66■■□□□ 1.22
CCT4-204ENST00000544079 SSFA2P28290 1259 aa22.66■■□□□ 1.22
CCT4-204ENST00000544079 PLEKHG5O94827 1062 aa22.65■■□□□ 1.22
CCT4-204ENST00000544079 DMTNQ08495 405 aa22.65■■□□□ 1.22
CCT4-204ENST00000544079 CCDC94Q9BW85 323 aaPredicted RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms