RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 BRINP3Q76B58 766 aa31.4■■■□□ 2.62
OTUB1-212ENST00000543988 KIAA1210Q9ULL0 1709 aa31.4■■■□□ 2.62
OTUB1-212ENST00000543988 C1orf167Q5SNV9 1468 aa31.39■■■□□ 2.62
OTUB1-212ENST00000543988 SAFB2Q14151 953 aaKnown RBP eCLIP31.37■■■□□ 2.61
OTUB1-212ENST00000543988 NBPF1Q3BBV0 1214 aa31.37■■■□□ 2.61
OTUB1-212ENST00000543988 TONSLQ96HA7 1378 aa31.35■■■□□ 2.61
OTUB1-212ENST00000543988 POGKQ9P215 609 aa31.35■■■□□ 2.61
OTUB1-212ENST00000543988 AHDC1Q5TGY3 1603 aaPredicted RBP31.33■■■□□ 2.61
OTUB1-212ENST00000543988 PHLPP1O60346 1717 aa31.29■■■□□ 2.6
OTUB1-212ENST00000543988 COL16A1Q07092 1604 aaPredicted RBP31.29■■■□□ 2.6
OTUB1-212ENST00000543988 ARHGEF28Q8N1W1 1705 aaKnown RBP31.29■■■□□ 2.6
OTUB1-212ENST00000543988 TRPM1Q7Z4N2 1603 aa31.27■■■□□ 2.6
OTUB1-212ENST00000543988 ADGRB2O60241 1585 aa31.27■■■□□ 2.6
OTUB1-212ENST00000543988 NBPF8Q3BBV2 869 aa31.27■■■□□ 2.6
OTUB1-212ENST00000543988 ORAI2Q96SN7 254 aa31.27■■■□□ 2.6
OTUB1-212ENST00000543988 NUTM2FA1L443 756 aa31.26■■■□□ 2.59
OTUB1-212ENST00000543988 FMN2Q9NZ56 1722 aa31.26■■■□□ 2.59
OTUB1-212ENST00000543988 MINK1Q8N4C8 1332 aaPredicted RBP31.24■■■□□ 2.59
OTUB1-212ENST00000543988 HIRIP3Q9BW71 556 aaPredicted RBP31.24■■■□□ 2.59
OTUB1-212ENST00000543988 NHSL1Q5SYE7 1610 aa31.24■■■□□ 2.59
OTUB1-212ENST00000543988 DDX17Q92841 729 aaKnown RBP31.23■■■□□ 2.59
OTUB1-212ENST00000543988 ROCK2O75116 1388 aaKnown RBP31.22■■■□□ 2.59
OTUB1-212ENST00000543988 CLSPNQ9HAW4 1339 aa31.22■■■□□ 2.59
OTUB1-212ENST00000543988 ESCO1Q5FWF5 840 aa31.2■■■□□ 2.59
OTUB1-212ENST00000543988 MED1Q15648 1581 aaPredicted RBP31.2■■■□□ 2.58
OTUB1-212ENST00000543988 JCADQ9P266 1359 aa31.18■■■□□ 2.58
OTUB1-212ENST00000543988 GPRASP1Q5JY77 1395 aa31.17■■■□□ 2.58
OTUB1-212ENST00000543988 RALGAPBQ86X10 1494 aa31.15■■■□□ 2.58
OTUB1-212ENST00000543988 ANKARQ7Z5J8 1434 aa31.15■■■□□ 2.58
OTUB1-212ENST00000543988 CCER1Q8TC90 406 aaPredicted RBP31.14■■■□□ 2.58
OTUB1-212ENST00000543988 DISP3Q9P2K9 1392 aa31.14■■■□□ 2.58
OTUB1-212ENST00000543988 WASLO00401 505 aaPredicted RBP31.13■■■□□ 2.57
OTUB1-212ENST00000543988 CENPJQ9HC77 1338 aaPredicted RBP31.13■■■□□ 2.57
OTUB1-212ENST00000543988 USP32Q8NFA0 1604 aa31.12■■■□□ 2.57
OTUB1-212ENST00000543988 EIF3AQ14152 1382 aaKnown RBP31.11■■■□□ 2.57
OTUB1-212ENST00000543988 TULP4Q9NRJ4 1543 aa31.11■■■□□ 2.57
OTUB1-212ENST00000543988 SOS2Q07890 1332 aaPredicted RBP31.1■■■□□ 2.57
OTUB1-212ENST00000543988 PRR36Q9H6K5 1346 aa31.1■■■□□ 2.57
OTUB1-212ENST00000543988 NPHP3Q7Z494 1330 aa31.09■■■□□ 2.57
OTUB1-212ENST00000543988 FOXO3O43524 673 aa31.08■■■□□ 2.57
OTUB1-212ENST00000543988 KIF1AQ12756 1690 aa31.08■■■□□ 2.57
OTUB1-212ENST00000543988 PXDNQ92626 1479 aa31.08■■■□□ 2.57
OTUB1-212ENST00000543988 PHF8Q9UPP1 1060 aa31.07■■■□□ 2.56
OTUB1-212ENST00000543988 SHPRHQ149N8 1683 aa31.06■■■□□ 2.56
OTUB1-212ENST00000543988 LRRC59Q96AG4 307 aaKnown RBP31.06■■■□□ 2.56
OTUB1-212ENST00000543988 XPCQ01831 940 aaPredicted RBP31.05■■■□□ 2.56
OTUB1-212ENST00000543988 CARD11Q9BXL7 1154 aa31.05■■■□□ 2.56
OTUB1-212ENST00000543988 QRICH2Q9H0J4 1663 aa31.04■■■□□ 2.56
OTUB1-212ENST00000543988 ATP7BP35670 1465 aa31.04■■■□□ 2.56
OTUB1-212ENST00000543988 PNPLA6Q8IY17 1366 aa31.04■■■□□ 2.56
OTUB1-212ENST00000543988 CDK19Q9BWU1 502 aa31.03■■■□□ 2.56
OTUB1-212ENST00000543988 RGPD8O14715 1765 aaPredicted RBP31.02■■■□□ 2.56
OTUB1-212ENST00000543988 SPATA31A6Q5VVP1 1343 aa31.02■■■□□ 2.56
OTUB1-212ENST00000543988 TIMELESSQ9UNS1 1208 aa31.01■■■□□ 2.55
OTUB1-212ENST00000543988 LRP6O75581 1613 aa31.01■■■□□ 2.55
OTUB1-212ENST00000543988 PMFBP1Q8TBY8 1022 aa30.99■■■□□ 2.55
OTUB1-212ENST00000543988 NUDT16Q96DE0 195 aaKnown RBP30.98■■■□□ 2.55
OTUB1-212ENST00000543988 PHF23Q9BUL5 403 aaPredicted RBP30.95■■■□□ 2.55
OTUB1-212ENST00000543988 KRT28Q7Z3Y7 464 aa30.94■■■□□ 2.54
OTUB1-212ENST00000543988 SRPK2P78362 688 aaKnown RBP30.93■■■□□ 2.54
OTUB1-212ENST00000543988 NUTM2BA6NNL0 878 aaPredicted RBP30.92■■■□□ 2.54
OTUB1-212ENST00000543988 NUTM2EB1AL46 878 aaPredicted RBP30.92■■■□□ 2.54
OTUB1-212ENST00000543988 NUTM2AQ8IVF1 878 aaPredicted RBP30.92■■■□□ 2.54
OTUB1-212ENST00000543988 TOPAZ1Q8N9V7 1692 aa30.91■■■□□ 2.54
OTUB1-212ENST00000543988 CABP2Q9NPB3 220 aa30.91■■■□□ 2.54
OTUB1-212ENST00000543988 SPATA31A3Q5VYP0 1347 aa30.9■■■□□ 2.54
OTUB1-212ENST00000543988 SBNO2Q9Y2G9 1366 aa30.9■■■□□ 2.54
OTUB1-212ENST00000543988 ITSN1Q15811 1721 aa30.9■■■□□ 2.54
OTUB1-212ENST00000543988 PSME1Q06323 249 aa30.89■■■□□ 2.54
OTUB1-212ENST00000543988 CCDC61Q9Y6R9 512 aa30.89■■■□□ 2.54
OTUB1-212ENST00000543988 EVC2Q86UK5 1308 aa30.89■■■□□ 2.54
OTUB1-212ENST00000543988 TNS3Q68CZ2 1445 aa30.89■■■□□ 2.53
OTUB1-212ENST00000543988 COL22A1Q8NFW1 1626 aaPredicted RBP30.87■■■□□ 2.53
OTUB1-212ENST00000543988 NGDNQ8NEJ9 315 aaKnown RBP30.87■■■□□ 2.53
OTUB1-212ENST00000543988 SBNO1A3KN83 1393 aa30.87■■■□□ 2.53
OTUB1-212ENST00000543988 MEX3CQ5U5Q3 659 aaKnown RBP30.86■■■□□ 2.53
OTUB1-212ENST00000543988 RGS17Q9UGC6 210 aaPredicted RBP30.85■■■□□ 2.53
OTUB1-212ENST00000543988 PPIP5K1Q6PFW1 1433 aa30.84■■■□□ 2.53
OTUB1-212ENST00000543988 POLR3AO14802 1390 aaPredicted RBP30.83■■■□□ 2.53
OTUB1-212ENST00000543988 PLEKHG3A1L390 1219 aa30.82■■■□□ 2.52
OTUB1-212ENST00000543988 TRPM3Q9HCF6 1732 aaPredicted RBP30.81■■■□□ 2.52
OTUB1-212ENST00000543988 USP47Q96K76 1375 aa30.81■■■□□ 2.52
OTUB1-212ENST00000543988 ACEP12821 1306 aa30.8■■■□□ 2.52
OTUB1-212ENST00000543988 ILDR2Q71H61 639 aa30.8■■■□□ 2.52
OTUB1-212ENST00000543988 ST20-MTHFSA0A0A6YYL1 179 aa30.79■■■□□ 2.52
OTUB1-212ENST00000543988 ARHGEF10O15013 1369 aa30.79■■■□□ 2.52
OTUB1-212ENST00000543988 ADAMTS2O95450 1211 aa30.78■■■□□ 2.52
OTUB1-212ENST00000543988 LMOD2Q6P5Q4 547 aa30.77■■■□□ 2.52
OTUB1-212ENST00000543988 TESK2Q96S53 571 aa30.77■■■□□ 2.52
OTUB1-212ENST00000543988 CABP1Q9NZU7 370 aa30.76■■■□□ 2.51
OTUB1-212ENST00000543988 ATAD2Q6PL18 1390 aa30.75■■■□□ 2.51
OTUB1-212ENST00000543988 C8orf37Q96NL8 207 aa30.73■■■□□ 2.51
OTUB1-212ENST00000543988 ALS2Q96Q42 1657 aa30.73■■■□□ 2.51
OTUB1-212ENST00000543988 PAK3O75914 559 aaPredicted RBP30.72■■■□□ 2.51
OTUB1-212ENST00000543988 PLEKHG5O94827 1062 aa30.7■■■□□ 2.51
OTUB1-212ENST00000543988 POTEAQ6S8J7 498 aa30.7■■■□□ 2.51
OTUB1-212ENST00000543988 CABLES1Q8TDN4 633 aa30.7■■■□□ 2.51
OTUB1-212ENST00000543988 AFF2P51816 1311 aa30.7■■■□□ 2.5
OTUB1-212ENST00000543988 USP6P35125 1406 aa30.66■■■□□ 2.5
OTUB1-212ENST00000543988 ABCA3Q99758 1704 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms