RNA–Protein interactions for RNA: ENST00000543955.5

PGAM5-204, Transcript of PGAM family member 5, mitochondrial serine/threonine protein phosphatase, humanhuman

TSL 2 BASIC

Gene PGAM5, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM5-204ENST00000543955 ROBO2Q9HCK4 1378 aa29.25■■■□□ 2.27
PGAM5-204ENST00000543955 EVC2Q86UK5 1308 aa29.24■■■□□ 2.27
PGAM5-204ENST00000543955 SAFB2Q14151 953 aaKnown RBP eCLIP29.24■■■□□ 2.27
PGAM5-204ENST00000543955 PLEKHH1Q9ULM0 1364 aa29.23■■■□□ 2.27
PGAM5-204ENST00000543955 ADGRB2O60241 1585 aa29.23■■■□□ 2.27
PGAM5-204ENST00000543955 MYOM1P52179 1685 aa29.23■■■□□ 2.27
PGAM5-204ENST00000543955 WAPLQ7Z5K2 1190 aa29.21■■■□□ 2.27
PGAM5-204ENST00000543955 MINK1Q8N4C8 1332 aaPredicted RBP29.19■■■□□ 2.26
PGAM5-204ENST00000543955 PUS7Q96PZ0 661 aaKnown RBP29.18■■■□□ 2.26
PGAM5-204ENST00000543955 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.17■■■□□ 2.26
PGAM5-204ENST00000543955 KCNA6P17658 529 aa29.16■■■□□ 2.26
PGAM5-204ENST00000543955 NKTRP30414 1462 aaKnown RBP29.15■■■□□ 2.26
PGAM5-204ENST00000543955 ATAD2Q6PL18 1390 aa29.11■■■□□ 2.25
PGAM5-204ENST00000543955 NALCNQ8IZF0 1738 aa29.09■■■□□ 2.25
PGAM5-204ENST00000543955 SRPK2P78362 688 aaKnown RBP29.08■■■□□ 2.25
PGAM5-204ENST00000543955 NINLQ9Y2I6 1382 aa29.08■■■□□ 2.25
PGAM5-204ENST00000543955 STRCP1A6NGW2 1772 aa29.08■■■□□ 2.25
PGAM5-204ENST00000543955 WASLO00401 505 aaPredicted RBP29.06■■■□□ 2.24
PGAM5-204ENST00000543955 CDK19Q9BWU1 502 aa29.06■■■□□ 2.24
PGAM5-204ENST00000543955 CABP2Q9NPB3 220 aa29.05■■■□□ 2.24
PGAM5-204ENST00000543955 DMRT2Q9Y5R5 561 aa29.05■■■□□ 2.24
PGAM5-204ENST00000543955 CDC42BPGQ6DT37 1551 aa29.04■■■□□ 2.24
PGAM5-204ENST00000543955 ADGRL3Q9HAR2 1447 aa29.01■■■□□ 2.23
PGAM5-204ENST00000543955 ITSN1Q15811 1721 aa29■■■□□ 2.23
PGAM5-204ENST00000543955 FMN2Q9NZ56 1722 aa29■■■□□ 2.23
PGAM5-204ENST00000543955 TOPAZ1Q8N9V7 1692 aa29■■■□□ 2.23
PGAM5-204ENST00000543955 PANK3Q9H999 370 aa28.99■■■□□ 2.23
PGAM5-204ENST00000543955 ATP7BP35670 1465 aa28.98■■■□□ 2.23
PGAM5-204ENST00000543955 TMC1Q8TDI8 760 aa28.98■■■□□ 2.23
PGAM5-204ENST00000543955 ANP32CO43423 234 aa28.97■■■□□ 2.23
PGAM5-204ENST00000543955 NCOA3Q9Y6Q9 1424 aa28.95■■■□□ 2.23
PGAM5-204ENST00000543955 ANKRD36BQ8N2N9 1353 aa28.95■■■□□ 2.22
PGAM5-204ENST00000543955 PROSER2Q86WR7 435 aaPredicted RBP28.94■■■□□ 2.22
PGAM5-204ENST00000543955 USP32Q8NFA0 1604 aa28.94■■■□□ 2.22
PGAM5-204ENST00000543955 ANKARQ7Z5J8 1434 aa28.93■■■□□ 2.22
PGAM5-204ENST00000543955 SLC12A5Q9H2X9 1139 aa28.93■■■□□ 2.22
PGAM5-204ENST00000543955 PPIP5K1Q6PFW1 1433 aa28.92■■■□□ 2.22
PGAM5-204ENST00000543955 PER1O15534 1290 aaPredicted RBP28.9■■■□□ 2.22
PGAM5-204ENST00000543955 MIER1Q8N108 512 aa28.9■■■□□ 2.22
PGAM5-204ENST00000543955 NUDT16Q96DE0 195 aaKnown RBP28.9■■■□□ 2.22
PGAM5-204ENST00000543955 C14orf37Q86TY3 774 aa28.9■■■□□ 2.22
PGAM5-204ENST00000543955 RGPD8O14715 1765 aaPredicted RBP28.89■■■□□ 2.22
PGAM5-204ENST00000543955 XIRP1Q702N8 1843 aaKnown RBP28.89■■■□□ 2.22
PGAM5-204ENST00000543955 CCDC61Q9Y6R9 512 aa28.89■■■□□ 2.22
PGAM5-204ENST00000543955 TMEM94Q12767 1356 aa28.88■■■□□ 2.21
PGAM5-204ENST00000543955 AKAP12Q02952 1782 aa28.88■■■□□ 2.21
PGAM5-204ENST00000543955 TERF2IPQ9NYB0 399 aa28.88■■■□□ 2.21
PGAM5-204ENST00000543955 KNSTRNQ9Y448 316 aa28.88■■■□□ 2.21
PGAM5-204ENST00000543955 CD163L1Q9NR16 1453 aa28.87■■■□□ 2.21
PGAM5-204ENST00000543955 PRR36Q9H6K5 1346 aa28.87■■■□□ 2.21
PGAM5-204ENST00000543955 A0A1W2PP64 1363 aa28.87■■■□□ 2.21
PGAM5-204ENST00000543955 ZNF335Q9H4Z2 1342 aaPredicted RBP28.86■■■□□ 2.21
PGAM5-204ENST00000543955 DCCP43146 1447 aa28.86■■■□□ 2.21
PGAM5-204ENST00000543955 AEBP2Q6ZN18 517 aaPredicted RBP28.85■■■□□ 2.21
PGAM5-204ENST00000543955 RBM33Q96EV2 1170 aaKnown RBP28.85■■■□□ 2.21
PGAM5-204ENST00000543955 CABP1Q9NZU7 370 aa28.85■■■□□ 2.21
PGAM5-204ENST00000543955 MON2Q7Z3U7 1717 aa28.85■■■□□ 2.21
PGAM5-204ENST00000543955 KTN1Q86UP2 1357 aaKnown RBP28.85■■■□□ 2.21
PGAM5-204ENST00000543955 LRRC7Q96NW7 1537 aa28.84■■■□□ 2.21
PGAM5-204ENST00000543955 NSD3Q9BZ95 1437 aa28.84■■■□□ 2.21
PGAM5-204ENST00000543955 HDGFL2Q7Z4V5 671 aaPredicted RBP28.84■■■□□ 2.21
PGAM5-204ENST00000543955 NPC1L1Q9UHC9 1359 aa28.83■■■□□ 2.21
PGAM5-204ENST00000543955 PRKRIP1Q9H875 184 aaPredicted RBP28.83■■■□□ 2.21
PGAM5-204ENST00000543955 C19orf44Q9H6X5 657 aa28.81■■■□□ 2.2
PGAM5-204ENST00000543955 CPSF1Q10570 1443 aaKnown RBP28.81■■■□□ 2.2
PGAM5-204ENST00000543955 CARD14Q9BXL6 1004 aa28.8■■■□□ 2.2
PGAM5-204ENST00000543955 NUTM2FA1L443 756 aa28.79■■■□□ 2.2
PGAM5-204ENST00000543955 MSH6P52701 1360 aa28.78■■■□□ 2.2
PGAM5-204ENST00000543955 AMER1Q5JTC6 1135 aaPredicted RBP28.78■■■□□ 2.2
PGAM5-204ENST00000543955 KIF20BQ96Q89 1820 aa28.78■■■□□ 2.2
PGAM5-204ENST00000543955 PLEKHG3A1L390 1219 aa28.77■■■□□ 2.2
PGAM5-204ENST00000543955 PARD3Q8TEW0 1356 aa28.75■■■□□ 2.19
PGAM5-204ENST00000543955 CGNL1Q0VF96 1302 aa28.75■■■□□ 2.19
PGAM5-204ENST00000543955 RALBP1Q15311 655 aa28.75■■■□□ 2.19
PGAM5-204ENST00000543955 ANKRD26Q9UPS8 1709 aa28.75■■■□□ 2.19
PGAM5-204ENST00000543955 NRKQ7Z2Y5 1582 aa28.75■■■□□ 2.19
PGAM5-204ENST00000543955 NSD2O96028 1365 aa28.75■■■□□ 2.19
PGAM5-204ENST00000543955 EDC4Q6P2E9 1401 aaKnown RBP28.74■■■□□ 2.19
PGAM5-204ENST00000543955 KIF1AQ12756 1690 aa28.73■■■□□ 2.19
PGAM5-204ENST00000543955 ZNF692Q9BU19 519 aaPredicted RBP28.73■■■□□ 2.19
PGAM5-204ENST00000543955 POLR3AO14802 1390 aaPredicted RBP28.73■■■□□ 2.19
PGAM5-204ENST00000543955 CCER2I3L3R5 266 aa28.73■■■□□ 2.19
PGAM5-204ENST00000543955 ATF3P18847 181 aa28.73■■■□□ 2.19
PGAM5-204ENST00000543955 CC2D1BQ5T0F9 858 aaKnown RBP28.73■■■□□ 2.19
PGAM5-204ENST00000543955 CNGB1Q14028 1251 aaPredicted RBP28.7■■■□□ 2.19
PGAM5-204ENST00000543955 CADPS2Q86UW7 1296 aa28.7■■■□□ 2.19
PGAM5-204ENST00000543955 ACEP12821 1306 aa28.7■■■□□ 2.18
PGAM5-204ENST00000543955 LTBP4Q8N2S1 1624 aa28.7■■■□□ 2.18
PGAM5-204ENST00000543955 MST1RQ04912 1400 aa28.7■■■□□ 2.18
PGAM5-204ENST00000543955 C1orf167Q5SNV9 1468 aa28.69■■■□□ 2.18
PGAM5-204ENST00000543955 USP6P35125 1406 aa28.68■■■□□ 2.18
PGAM5-204ENST00000543955 MYBBP1AQ9BQG0 1328 aaKnown RBP28.66■■■□□ 2.18
PGAM5-204ENST00000543955 NGDNQ8NEJ9 315 aaKnown RBP28.65■■■□□ 2.18
PGAM5-204ENST00000543955 PMFBP1Q8TBY8 1022 aa28.65■■■□□ 2.18
PGAM5-204ENST00000543955 PHF8Q9UPP1 1060 aa28.65■■■□□ 2.18
PGAM5-204ENST00000543955 ESCO1Q5FWF5 840 aa28.63■■■□□ 2.17
PGAM5-204ENST00000543955 BRD4O60885 1362 aaPredicted RBP28.61■■■□□ 2.17
PGAM5-204ENST00000543955 SSH2Q76I76 1423 aa28.6■■■□□ 2.17
PGAM5-204ENST00000543955 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.58■■■□□ 2.17
PGAM5-204ENST00000543955 FYB1O15117 783 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms