RNA–Protein interactions for RNA: ENST00000543697.5

RAP1B-230, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-230ENST00000543697 ARAP3Q8WWN8 1544 aa12.23□□□□□ -0.45
RAP1B-230ENST00000543697 KDM5BQ9UGL1 1544 aa12.23□□□□□ -0.45
RAP1B-230ENST00000543697 EEA1Q15075 1411 aa12.23□□□□□ -0.45
RAP1B-230ENST00000543697 BEGAINQ9BUH8 593 aa12.23□□□□□ -0.45
RAP1B-230ENST00000543697 RAPGEF2Q9Y4G8 1499 aa12.21□□□□□ -0.45
RAP1B-230ENST00000543697 CD109Q6YHK3 1445 aa12.21□□□□□ -0.45
RAP1B-230ENST00000543697 TRIM6-TRIM34B2RNG4 842 aa12.21□□□□□ -0.45
RAP1B-230ENST00000543697 DNAJB2P25686 324 aa12.21□□□□□ -0.45
RAP1B-230ENST00000543697 PTPRTO14522 1441 aa12.2□□□□□ -0.46
RAP1B-230ENST00000543697 EYA1Q99502 592 aa12.2□□□□□ -0.46
RAP1B-230ENST00000543697 CFAP43Q8NDM7 1665 aa12.19□□□□□ -0.46
RAP1B-230ENST00000543697 ZCCHC11Q5TAX3 1644 aaKnown RBP12.19□□□□□ -0.46
RAP1B-230ENST00000543697 TTBK1Q5TCY1 1321 aaPredicted RBP12.18□□□□□ -0.46
RAP1B-230ENST00000543697 UBAP1LF5GYI3 381 aa12.18□□□□□ -0.46
RAP1B-230ENST00000543697 ARXQ96QS3 562 aa12.18□□□□□ -0.46
RAP1B-230ENST00000543697 ARID4BQ4LE39 1312 aaPredicted RBP12.17□□□□□ -0.46
RAP1B-230ENST00000543697 PREX1Q8TCU6 1659 aa12.17□□□□□ -0.46
RAP1B-230ENST00000543697 RCCD1A6NED2 376 aa12.17□□□□□ -0.46
RAP1B-230ENST00000543697 COL9A1P20849 921 aa12.17□□□□□ -0.46
RAP1B-230ENST00000543697 HSPA1LP34931 641 aa12.17□□□□□ -0.46
RAP1B-230ENST00000543697 RSPH4AQ5TD94 716 aa12.17□□□□□ -0.46
RAP1B-230ENST00000543697 ZMYND15Q9H091 742 aa12.17□□□□□ -0.46
RAP1B-230ENST00000543697 UACAQ9BZF9 1416 aa12.17□□□□□ -0.46
RAP1B-230ENST00000543697 TNIKQ9UKE5 1360 aa12.17□□□□□ -0.46
RAP1B-230ENST00000543697 WDR7Q9Y4E6 1490 aa12.16□□□□□ -0.46
RAP1B-230ENST00000543697 SLC4A5Q9BY07 1137 aa12.16□□□□□ -0.46
RAP1B-230ENST00000543697 PBX2P40425 430 aa12.15□□□□□ -0.46
RAP1B-230ENST00000543697 FAM161AQ3B820 660 aa12.15□□□□□ -0.46
RAP1B-230ENST00000543697 TATDN2Q93075 761 aa12.15□□□□□ -0.46
RAP1B-230ENST00000543697 TSKSQ9UJT2 592 aa12.15□□□□□ -0.46
RAP1B-230ENST00000543697 PRXQ9BXM0 1461 aa12.14□□□□□ -0.47
RAP1B-230ENST00000543697 GJA5P36382 358 aa12.14□□□□□ -0.47
RAP1B-230ENST00000543697 TUSC1Q2TAM9 212 aa12.14□□□□□ -0.47
RAP1B-230ENST00000543697 TMEM134Q9H6X4 195 aa12.14□□□□□ -0.47
RAP1B-230ENST00000543697 CTTNBP2Q8WZ74 1663 aa12.13□□□□□ -0.47
RAP1B-230ENST00000543697 SLC4A3P48751 1232 aa12.13□□□□□ -0.47
RAP1B-230ENST00000543697 NUDT18Q6ZVK8 323 aa12.13□□□□□ -0.47
RAP1B-230ENST00000543697 PNMA3Q9UL41 463 aa12.13□□□□□ -0.47
RAP1B-230ENST00000543697 RGS17Q9UGC6 210 aaPredicted RBP12.12□□□□□ -0.47
RAP1B-230ENST00000543697 IQGAP2Q13576 1575 aa12.12□□□□□ -0.47
RAP1B-230ENST00000543697 TTC37Q6PGP7 1564 aa12.11□□□□□ -0.47
RAP1B-230ENST00000543697 CD46P15529 392 aa12.11□□□□□ -0.47
RAP1B-230ENST00000543697 CLK2P49760 499 aaKnown RBP12.11□□□□□ -0.47
RAP1B-230ENST00000543697 KCNK17Q96T54 332 aa12.11□□□□□ -0.47
RAP1B-230ENST00000543697 FAM198AQ9UFP1 575 aa12.11□□□□□ -0.47
RAP1B-230ENST00000543697 FRMPD1Q5SYB0 1578 aa12.1□□□□□ -0.47
RAP1B-230ENST00000543697 RAPGEF3O95398 923 aa12.1□□□□□ -0.47
RAP1B-230ENST00000543697 MYSM1Q5VVJ2 828 aa12.1□□□□□ -0.47
RAP1B-230ENST00000543697 SIGLEC1Q9BZZ2 1709 aa12.09□□□□□ -0.47
RAP1B-230ENST00000543697 ARHGAP33O14559 1287 aa12.09□□□□□ -0.47
RAP1B-230ENST00000543697 OTUD5Q96G74 571 aa12.09□□□□□ -0.47
RAP1B-230ENST00000543697 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.09□□□□□ -0.47
RAP1B-230ENST00000543697 TBC1D2Q9BYX2 928 aa12.09□□□□□ -0.47
RAP1B-230ENST00000543697 RABGEF1Q9UJ41 708 aa12.09□□□□□ -0.47
RAP1B-230ENST00000543697 UBTFP17480 764 aaKnown RBP12.08□□□□□ -0.48
RAP1B-230ENST00000543697 HDGFP51858 240 aaKnown RBP12.08□□□□□ -0.48
RAP1B-230ENST00000543697 ZBED2Q9BTP6 218 aa12.08□□□□□ -0.48
RAP1B-230ENST00000543697 RANGAP1P46060 587 aaPredicted RBP12.07□□□□□ -0.48
RAP1B-230ENST00000543697 USP46P62068 366 aa12.07□□□□□ -0.48
RAP1B-230ENST00000543697 NUTM1Q86Y26 1132 aa12.07□□□□□ -0.48
RAP1B-230ENST00000543697 ERBB3P21860 1342 aa12.07□□□□□ -0.48
RAP1B-230ENST00000543697 ARHGEF40Q8TER5 1519 aa12.06□□□□□ -0.48
RAP1B-230ENST00000543697 FER1L4A9Z1Z3 1794 aa12.06□□□□□ -0.48
RAP1B-230ENST00000543697 BANK1Q8NDB2 785 aa12.06□□□□□ -0.48
RAP1B-230ENST00000543697 GOLGA3Q08378 1498 aa12.06□□□□□ -0.48
RAP1B-230ENST00000543697 CARMIL2Q6F5E8 1435 aa12.05□□□□□ -0.48
RAP1B-230ENST00000543697 NLRP7Q8WX94 980 aa12.05□□□□□ -0.48
RAP1B-230ENST00000543697 NECTIN2Q92692 538 aa12.05□□□□□ -0.48
RAP1B-230ENST00000543697 ATP1B4Q9UN42 357 aaPredicted RBP12.05□□□□□ -0.48
RAP1B-230ENST00000543697 A6NJR5 290 aa12.04□□□□□ -0.48
RAP1B-230ENST00000543697 TMEM259Q4ZIN3 620 aa12.04□□□□□ -0.48
RAP1B-230ENST00000543697 PPP2R2DQ66LE6 453 aa12.04□□□□□ -0.48
RAP1B-230ENST00000543697 SETD1BQ9UPS6 1966 aaKnown RBP12.04□□□□□ -0.48
RAP1B-230ENST00000543697 DDX11L8A8MPP1 907 aa12.03□□□□□ -0.48
RAP1B-230ENST00000543697 APBB1O00213 710 aa12.03□□□□□ -0.48
RAP1B-230ENST00000543697 LHX8Q68G74 356 aa12.03□□□□□ -0.48
RAP1B-230ENST00000543697 LAPTM4BQ86VI4 370 aa12.03□□□□□ -0.48
RAP1B-230ENST00000543697 SPDYE5A6NIY4 337 aa12.02□□□□□ -0.49
RAP1B-230ENST00000543697 SPTLC1O15269 473 aa12.02□□□□□ -0.49
RAP1B-230ENST00000543697 SPIRE2Q8WWL2 714 aa12.02□□□□□ -0.49
RAP1B-230ENST00000543697 KIAA1468Q9P260 1216 aa12.02□□□□□ -0.49
RAP1B-230ENST00000543697 UGGT2Q9NYU1 1516 aa12.01□□□□□ -0.49
RAP1B-230ENST00000543697 MCM6Q14566 821 aa12.01□□□□□ -0.49
RAP1B-230ENST00000543697 PROX2Q3B8N5 592 aa12.01□□□□□ -0.49
RAP1B-230ENST00000543697 RIC3Q7Z5B4 369 aa12.01□□□□□ -0.49
RAP1B-230ENST00000543697 NBPF3Q9H094 633 aa12.01□□□□□ -0.49
RAP1B-230ENST00000543697 POLR3EQ9NVU0 708 aa12.01□□□□□ -0.49
RAP1B-230ENST00000543697 ZNF335Q9H4Z2 1342 aaPredicted RBP12.01□□□□□ -0.49
RAP1B-230ENST00000543697 PHLDB1Q86UU1 1377 aa12.01□□□□□ -0.49
RAP1B-230ENST00000543697 UHRF1BP1Q6BDS2 1440 aa12.01□□□□□ -0.49
RAP1B-230ENST00000543697 FAM98CQ17RN3 349 aaKnown RBP12□□□□□ -0.49
RAP1B-230ENST00000543697 KIAA0556O60303 1618 aa12□□□□□ -0.49
RAP1B-230ENST00000543697 SETD1AO15047 1707 aaKnown RBP12□□□□□ -0.49
RAP1B-230ENST00000543697 CEBPAP49715 358 aaPredicted RBP11.99□□□□□ -0.49
RAP1B-230ENST00000543697 VARS2Q5ST30 1063 aaKnown RBP11.99□□□□□ -0.49
RAP1B-230ENST00000543697 PRPF38BQ5VTL8 546 aaKnown RBP11.99□□□□□ -0.49
RAP1B-230ENST00000543697 ZNF687Q8N1G0 1237 aa11.99□□□□□ -0.49
RAP1B-230ENST00000543697 RDH13Q8NBN7 331 aa11.99□□□□□ -0.49
RAP1B-230ENST00000543697 POGZQ7Z3K3 1410 aa11.99□□□□□ -0.49
RAP1B-230ENST00000543697 DISP1Q96F81 1524 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms