RNA–Protein interactions for RNA: ENST00000542777.1

DDX11-222, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-222ENST00000542777 ESCO1Q5FWF5 840 aa23.86■■□□□ 1.41
DDX11-222ENST00000542777 TMEM132EQ6IEE7 984 aa23.86■■□□□ 1.41
DDX11-222ENST00000542777 WAPLQ7Z5K2 1190 aa23.86■■□□□ 1.41
DDX11-222ENST00000542777 UPF1Q92900 1129 aaKnown RBP eCLIP23.86■■□□□ 1.41
DDX11-222ENST00000542777 QTRT2Q9H974 415 aaKnown RBP23.86■■□□□ 1.41
DDX11-222ENST00000542777 LRPPRCP42704 1394 aaKnown RBP23.86■■□□□ 1.41
DDX11-222ENST00000542777 CDK12Q9NYV4 1490 aaPredicted RBP23.86■■□□□ 1.41
DDX11-222ENST00000542777 ACIN1Q9UKV3 1341 aaKnown RBP23.85■■□□□ 1.41
DDX11-222ENST00000542777 NGLY1Q96IV0 654 aa23.85■■□□□ 1.41
DDX11-222ENST00000542777 CDC42BPGQ6DT37 1551 aa23.85■■□□□ 1.41
DDX11-222ENST00000542777 TECPR2O15040 1411 aa23.84■■□□□ 1.41
DDX11-222ENST00000542777 ABCC11Q96J66 1382 aa23.83■■□□□ 1.41
DDX11-222ENST00000542777 RBM6P78332 1123 aaKnown RBP23.82■■□□□ 1.4
DDX11-222ENST00000542777 PIK3C2GO75747 1445 aa23.82■■□□□ 1.4
DDX11-222ENST00000542777 NPHP3Q7Z494 1330 aa23.82■■□□□ 1.4
DDX11-222ENST00000542777 NUTM2FA1L443 756 aa23.8■■□□□ 1.4
DDX11-222ENST00000542777 KNDC1Q76NI1 1749 aa23.8■■□□□ 1.4
DDX11-222ENST00000542777 PLEKHH1Q9ULM0 1364 aa23.79■■□□□ 1.4
DDX11-222ENST00000542777 FOXO3O43524 673 aa23.79■■□□□ 1.4
DDX11-222ENST00000542777 YTHDC2Q9H6S0 1430 aaKnown RBP23.78■■□□□ 1.4
DDX11-222ENST00000542777 COL22A1Q8NFW1 1626 aaPredicted RBP23.77■■□□□ 1.4
DDX11-222ENST00000542777 C14orf93Q9H972 538 aaKnown RBP23.77■■□□□ 1.4
DDX11-222ENST00000542777 XPCQ01831 940 aaPredicted RBP23.76■■□□□ 1.39
DDX11-222ENST00000542777 USP21Q9UK80 565 aa23.76■■□□□ 1.39
DDX11-222ENST00000542777 RGS12O14924 1447 aa23.76■■□□□ 1.39
DDX11-222ENST00000542777 PXDNQ92626 1479 aa23.75■■□□□ 1.39
DDX11-222ENST00000542777 SIRT1Q96EB6 747 aa23.75■■□□□ 1.39
DDX11-222ENST00000542777 CFAP70Q5T0N1 1121 aa23.73■■□□□ 1.39
DDX11-222ENST00000542777 FNBP4Q8N3X1 1017 aaPredicted RBP23.73■■□□□ 1.39
DDX11-222ENST00000542777 RAB3GAP2Q9H2M9 1393 aa23.73■■□□□ 1.39
DDX11-222ENST00000542777 FMN2Q9NZ56 1722 aa23.73■■□□□ 1.39
DDX11-222ENST00000542777 TRPC5Q9UL62 973 aaPredicted RBP23.72■■□□□ 1.39
DDX11-222ENST00000542777 DHX57Q6P158 1386 aaKnown RBP23.72■■□□□ 1.39
DDX11-222ENST00000542777 MYOM2P54296 1465 aa23.72■■□□□ 1.39
DDX11-222ENST00000542777 NRXN1Q9ULB1 1477 aa23.72■■□□□ 1.39
DDX11-222ENST00000542777 MARF1Q9Y4F3 1742 aaKnown RBP23.67■■□□□ 1.38
DDX11-222ENST00000542777 KIF1AQ12756 1690 aa23.67■■□□□ 1.38
DDX11-222ENST00000542777 KRT28Q7Z3Y7 464 aa23.66■■□□□ 1.38
DDX11-222ENST00000542777 ATRNO75882 1429 aa23.66■■□□□ 1.38
DDX11-222ENST00000542777 SPATA31A3Q5VYP0 1347 aa23.65■■□□□ 1.38
DDX11-222ENST00000542777 SAFB2Q14151 953 aaKnown RBP eCLIP23.65■■□□□ 1.38
DDX11-222ENST00000542777 PRAM1Q96QH2 718 aa23.65■■□□□ 1.38
DDX11-222ENST00000542777 RGPD8O14715 1765 aaPredicted RBP23.65■■□□□ 1.38
DDX11-222ENST00000542777 PHF8Q9UPP1 1060 aa23.63■■□□□ 1.37
DDX11-222ENST00000542777 BCL9LQ86UU0 1499 aa23.62■■□□□ 1.37
DDX11-222ENST00000542777 POGKQ9P215 609 aa23.62■■□□□ 1.37
DDX11-222ENST00000542777 PSME1Q06323 249 aa23.6■■□□□ 1.37
DDX11-222ENST00000542777 ATAD2Q6PL18 1390 aa23.6■■□□□ 1.37
DDX11-222ENST00000542777 DLC1Q96QB1 1528 aa23.59■■□□□ 1.37
DDX11-222ENST00000542777 KDM2AQ9Y2K7 1162 aa23.59■■□□□ 1.37
DDX11-222ENST00000542777 DCAF11Q8TEB1 546 aa23.57■■□□□ 1.36
DDX11-222ENST00000542777 GJD4Q96KN9 370 aaPredicted RBP23.57■■□□□ 1.36
DDX11-222ENST00000542777 TRAK1Q9UPV9 953 aa23.57■■□□□ 1.36
DDX11-222ENST00000542777 ADGRB1O14514 1584 aa23.56■■□□□ 1.36
DDX11-222ENST00000542777 HRCP23327 699 aa23.55■■□□□ 1.36
DDX11-222ENST00000542777 HAP1P54257 671 aaPredicted RBP23.55■■□□□ 1.36
DDX11-222ENST00000542777 UNC5CLQ8IV45 518 aa23.55■■□□□ 1.36
DDX11-222ENST00000542777 TNS3Q68CZ2 1445 aa23.55■■□□□ 1.36
DDX11-222ENST00000542777 PMFBP1Q8TBY8 1022 aa23.54■■□□□ 1.36
DDX11-222ENST00000542777 SLIT2O94813 1529 aa23.54■■□□□ 1.36
DDX11-222ENST00000542777 SBNO1A3KN83 1393 aa23.53■■□□□ 1.36
DDX11-222ENST00000542777 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.53■■□□□ 1.36
DDX11-222ENST00000542777 USP32Q8NFA0 1604 aa23.53■■□□□ 1.36
DDX11-222ENST00000542777 PLEKHG5O94827 1062 aa23.53■■□□□ 1.36
DDX11-222ENST00000542777 LMOD2Q6P5Q4 547 aa23.53■■□□□ 1.36
DDX11-222ENST00000542777 CABLES1Q8TDN4 633 aa23.53■■□□□ 1.36
DDX11-222ENST00000542777 ANKARQ7Z5J8 1434 aa23.52■■□□□ 1.36
DDX11-222ENST00000542777 STAC3Q96MF2 364 aa23.52■■□□□ 1.36
DDX11-222ENST00000542777 HIRIP3Q9BW71 556 aaPredicted RBP23.52■■□□□ 1.36
DDX11-222ENST00000542777 ADGRB2O60241 1585 aa23.52■■□□□ 1.36
DDX11-222ENST00000542777 MINK1Q8N4C8 1332 aaPredicted RBP23.51■■□□□ 1.35
DDX11-222ENST00000542777 ARHGEF10O15013 1369 aa23.5■■□□□ 1.35
DDX11-222ENST00000542777 RALGAPBQ86X10 1494 aa23.48■■□□□ 1.35
DDX11-222ENST00000542777 GLI3P10071 1580 aa23.47■■□□□ 1.35
DDX11-222ENST00000542777 WASLO00401 505 aaPredicted RBP23.46■■□□□ 1.35
DDX11-222ENST00000542777 EIF3AQ14152 1382 aaKnown RBP23.46■■□□□ 1.35
DDX11-222ENST00000542777 PRR36Q9H6K5 1346 aa23.45■■□□□ 1.34
DDX11-222ENST00000542777 CCDC125Q86Z20 511 aa23.45■■□□□ 1.34
DDX11-222ENST00000542777 ABCA3Q99758 1704 aa23.45■■□□□ 1.34
DDX11-222ENST00000542777 TULP4Q9NRJ4 1543 aa23.43■■□□□ 1.34
DDX11-222ENST00000542777 GPRASP1Q5JY77 1395 aa23.43■■□□□ 1.34
DDX11-222ENST00000542777 VPS72Q15906 364 aa23.43■■□□□ 1.34
DDX11-222ENST00000542777 TRPM3Q9HCF6 1732 aaPredicted RBP23.42■■□□□ 1.34
DDX11-222ENST00000542777 NWD2Q9ULI1 1742 aa23.42■■□□□ 1.34
DDX11-222ENST00000542777 PLCH1Q4KWH8 1693 aa23.42■■□□□ 1.34
DDX11-222ENST00000542777 CCDC9Q9Y3X0 531 aaKnown RBP23.42■■□□□ 1.34
DDX11-222ENST00000542777 FAM83GA6ND36 823 aa23.41■■□□□ 1.34
DDX11-222ENST00000542777 SEPT12Q8IYM1 358 aa23.4■■□□□ 1.34
DDX11-222ENST00000542777 NGDNQ8NEJ9 315 aaKnown RBP23.4■■□□□ 1.34
DDX11-222ENST00000542777 BRWD3Q6RI45 1802 aa23.39■■□□□ 1.33
DDX11-222ENST00000542777 ARHGEF28Q8N1W1 1705 aaKnown RBP23.39■■□□□ 1.33
DDX11-222ENST00000542777 ALS2Q96Q42 1657 aa23.38■■□□□ 1.33
DDX11-222ENST00000542777 ONECUT3O60422 494 aaPredicted RBP23.36■■□□□ 1.33
DDX11-222ENST00000542777 PAK3O75914 559 aaPredicted RBP23.36■■□□□ 1.33
DDX11-222ENST00000542777 NUDT16Q96DE0 195 aaKnown RBP23.36■■□□□ 1.33
DDX11-222ENST00000542777 ZRANB1Q9UGI0 708 aa23.36■■□□□ 1.33
DDX11-222ENST00000542777 BTG4Q9NY30 223 aa23.34■■□□□ 1.33
DDX11-222ENST00000542777 EP400Q96L91 3159 aa23.34■■□□□ 1.33
DDX11-222ENST00000542777 ITSN1Q15811 1721 aa23.33■■□□□ 1.32
DDX11-222ENST00000542777 BLMP54132 1417 aaPredicted RBP23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms