RNA–Protein interactions for RNA: ENST00000542011.1

VSIG10-208, Transcript of V-set and immunoglobulin domain containing 10, human

TSL 3

Gene VSIG10, Length 572 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VSIG10-208	ENST00000542011	NPHP3	Q7Z494	1330 aa		14.21	□□□□□ -0.13
VSIG10-208	ENST00000542011	YTHDC2	Q9H6S0	1430 aa	Known RBP	14.21	□□□□□ -0.13
VSIG10-208	ENST00000542011	POTEA	Q6S8J7	498 aa		14.2	□□□□□ -0.14
VSIG10-208	ENST00000542011	STK26	Q9P289	416 aa		14.19	□□□□□ -0.14
VSIG10-208	ENST00000542011	LAMC1	P11047	1609 aa		14.19	□□□□□ -0.14
VSIG10-208	ENST00000542011	CDC42BPG	Q6DT37	1551 aa		14.18	□□□□□ -0.14
VSIG10-208	ENST00000542011	TMEM132E	Q6IEE7	984 aa		14.18	□□□□□ -0.14
VSIG10-208	ENST00000542011	PNPLA6	Q8IY17	1366 aa		14.18	□□□□□ -0.14
VSIG10-208	ENST00000542011	ESCO1	Q5FWF5	840 aa		14.17	□□□□□ -0.14
VSIG10-208	ENST00000542011	CFAP70	Q5T0N1	1121 aa		14.17	□□□□□ -0.14
VSIG10-208	ENST00000542011	WAPL	Q7Z5K2	1190 aa		14.17	□□□□□ -0.14
VSIG10-208	ENST00000542011	ORAI2	Q96SN7	254 aa		14.17	□□□□□ -0.14
VSIG10-208	ENST00000542011	LRP6	O75581	1613 aa		14.15	□□□□□ -0.14
VSIG10-208	ENST00000542011	DLC1	Q96QB1	1528 aa		14.14	□□□□□ -0.15
VSIG10-208	ENST00000542011	EIF3A	Q14152	1382 aa	Known RBP	14.13	□□□□□ -0.15
VSIG10-208	ENST00000542011	NUTM2B	A6NNL0	878 aa	Predicted RBP	14.13	□□□□□ -0.15
VSIG10-208	ENST00000542011	NUTM2E	B1AL46	878 aa	Predicted RBP	14.13	□□□□□ -0.15
VSIG10-208	ENST00000542011	RXRB	P28702	533 aa		14.13	□□□□□ -0.15
VSIG10-208	ENST00000542011	NUTM2A	Q8IVF1	878 aa	Predicted RBP	14.13	□□□□□ -0.15
VSIG10-208	ENST00000542011	DCAF11	Q8TEB1	546 aa		14.13	□□□□□ -0.15
VSIG10-208	ENST00000542011	DDX17	Q92841	729 aa	Known RBP	14.12	□□□□□ -0.15
VSIG10-208	ENST00000542011	PRAM1	Q96QH2	718 aa		14.12	□□□□□ -0.15
VSIG10-208	ENST00000542011	POGK	Q9P215	609 aa		14.12	□□□□□ -0.15
VSIG10-208	ENST00000542011	CDK12	Q9NYV4	1490 aa	Predicted RBP	14.12	□□□□□ -0.15
VSIG10-208	ENST00000542011	PLEKHH1	Q9ULM0	1364 aa		14.11	□□□□□ -0.15
VSIG10-208	ENST00000542011	PSME1	Q06323	249 aa		14.11	□□□□□ -0.15
VSIG10-208	ENST00000542011	ANKAR	Q7Z5J8	1434 aa		14.11	□□□□□ -0.15
VSIG10-208	ENST00000542011	AFF2	P51816	1311 aa		14.11	□□□□□ -0.15
VSIG10-208	ENST00000542011	FOXO3	O43524	673 aa		14.1	□□□□□ -0.15
VSIG10-208	ENST00000542011	FNBP4	Q8N3X1	1017 aa	Predicted RBP	14.1	□□□□□ -0.15
VSIG10-208	ENST00000542011	FMN2	Q9NZ56	1722 aa		14.08	□□□□□ -0.16
VSIG10-208	ENST00000542011	RBM6	P78332	1123 aa	Known RBP	14.08	□□□□□ -0.16
VSIG10-208	ENST00000542011	NGLY1	Q96IV0	654 aa		14.08	□□□□□ -0.16
VSIG10-208	ENST00000542011	C8orf37	Q96NL8	207 aa		14.08	□□□□□ -0.16
VSIG10-208	ENST00000542011	PHF8	Q9UPP1	1060 aa		14.08	□□□□□ -0.16
VSIG10-208	ENST00000542011	KDM2A	Q9Y2K7	1162 aa		14.08	□□□□□ -0.16
VSIG10-208	ENST00000542011	ADGRB1	O14514	1584 aa		14.08	□□□□□ -0.16
VSIG10-208	ENST00000542011	PXDN	Q92626	1479 aa		14.07	□□□□□ -0.16
VSIG10-208	ENST00000542011	SPATA31A3	Q5VYP0	1347 aa		14.07	□□□□□ -0.16
VSIG10-208	ENST00000542011	SBNO1	A3KN83	1393 aa		14.07	□□□□□ -0.16
VSIG10-208	ENST00000542011	COL22A1	Q8NFW1	1626 aa	Predicted RBP	14.06	□□□□□ -0.16
VSIG10-208	ENST00000542011	KRT28	Q7Z3Y7	464 aa		14.06	□□□□□ -0.16
VSIG10-208	ENST00000542011	QTRT2	Q9H974	415 aa	Known RBP	14.06	□□□□□ -0.16
VSIG10-208	ENST00000542011	TRPC5	Q9UL62	973 aa	Predicted RBP	14.06	□□□□□ -0.16
VSIG10-208	ENST00000542011	TRAK1	Q9UPV9	953 aa		14.06	□□□□□ -0.16
VSIG10-208	ENST00000542011	MARF1	Q9Y4F3	1742 aa	Known RBP	14.06	□□□□□ -0.16
VSIG10-208	ENST00000542011	ARHGEF10	O15013	1369 aa		14.05	□□□□□ -0.16
VSIG10-208	ENST00000542011	NUTM2F	A1L443	756 aa		14.04	□□□□□ -0.16
VSIG10-208	ENST00000542011	WASL	O00401	505 aa	Predicted RBP	14.04	□□□□□ -0.16
VSIG10-208	ENST00000542011	ADAMTS2	O95450	1211 aa		14.04	□□□□□ -0.16
VSIG10-208	ENST00000542011	KIF1A	Q12756	1690 aa		14.04	□□□□□ -0.16
VSIG10-208	ENST00000542011	RGPD8	O14715	1765 aa	Predicted RBP	14.04	□□□□□ -0.16
VSIG10-208	ENST00000542011	USP21	Q9UK80	565 aa		14.03	□□□□□ -0.16
VSIG10-208	ENST00000542011	ADGRB2	O60241	1585 aa		14.02	□□□□□ -0.16
VSIG10-208	ENST00000542011	GPRASP1	Q5JY77	1395 aa		14.02	□□□□□ -0.17
VSIG10-208	ENST00000542011	SAFB2	Q14151	953 aa	Known RBP eCLIP	14.02	□□□□□ -0.17
VSIG10-208	ENST00000542011	TNS3	Q68CZ2	1445 aa		14.01	□□□□□ -0.17
VSIG10-208	ENST00000542011	XPC	Q01831	940 aa	Predicted RBP	14	□□□□□ -0.17
VSIG10-208	ENST00000542011	ABCA3	Q99758	1704 aa		13.99	□□□□□ -0.17
VSIG10-208	ENST00000542011	ATRN	O75882	1429 aa		13.98	□□□□□ -0.17
VSIG10-208	ENST00000542011	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.98	□□□□□ -0.17
VSIG10-208	ENST00000542011	UNC5CL	Q8IV45	518 aa		13.98	□□□□□ -0.17
VSIG10-208	ENST00000542011	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
VSIG10-208	ENST00000542011	TULP4	Q9NRJ4	1543 aa		13.98	□□□□□ -0.17
VSIG10-208	ENST00000542011	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.98	□□□□□ -0.17
VSIG10-208	ENST00000542011	HAP1	P54257	671 aa	Predicted RBP	13.97	□□□□□ -0.17
VSIG10-208	ENST00000542011	USP32	Q8NFA0	1604 aa		13.97	□□□□□ -0.17
VSIG10-208	ENST00000542011	BCL9L	Q86UU0	1499 aa		13.96	□□□□□ -0.17
VSIG10-208	ENST00000542011	NGDN	Q8NEJ9	315 aa	Known RBP	13.96	□□□□□ -0.17
VSIG10-208	ENST00000542011	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.96	□□□□□ -0.17
VSIG10-208	ENST00000542011	CCDC61	Q9Y6R9	512 aa		13.96	□□□□□ -0.17
VSIG10-208	ENST00000542011	PRR36	Q9H6K5	1346 aa		13.95	□□□□□ -0.18
VSIG10-208	ENST00000542011	PLEKHG3	A1L390	1219 aa		13.95	□□□□□ -0.18
VSIG10-208	ENST00000542011	PMFBP1	Q8TBY8	1022 aa		13.95	□□□□□ -0.18
VSIG10-208	ENST00000542011	NUDT16	Q96DE0	195 aa	Known RBP	13.95	□□□□□ -0.18
VSIG10-208	ENST00000542011	GJD4	Q96KN9	370 aa	Predicted RBP	13.95	□□□□□ -0.18
VSIG10-208	ENST00000542011	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.95	□□□□□ -0.18
VSIG10-208	ENST00000542011	BRD4	O60885	1362 aa	Predicted RBP	13.95	□□□□□ -0.18
VSIG10-208	ENST00000542011	SLIT2	O94813	1529 aa		13.95	□□□□□ -0.18
VSIG10-208	ENST00000542011	RGS12	O14924	1447 aa		13.94	□□□□□ -0.18
VSIG10-208	ENST00000542011	L3MBTL2	Q969R5	705 aa		13.94	□□□□□ -0.18
VSIG10-208	ENST00000542011	CDK19	Q9BWU1	502 aa		13.94	□□□□□ -0.18
VSIG10-208	ENST00000542011	KIAA1210	Q9ULL0	1709 aa		13.94	□□□□□ -0.18
VSIG10-208	ENST00000542011	ATAD2	Q6PL18	1390 aa		13.94	□□□□□ -0.18
VSIG10-208	ENST00000542011	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.93	□□□□□ -0.18
VSIG10-208	ENST00000542011	ITSN1	Q15811	1721 aa		13.93	□□□□□ -0.18
VSIG10-208	ENST00000542011	CCDC125	Q86Z20	511 aa		13.93	□□□□□ -0.18
VSIG10-208	ENST00000542011	VPS72	Q15906	364 aa		13.92	□□□□□ -0.18
VSIG10-208	ENST00000542011	NBPF1	Q3BBV0	1214 aa		13.92	□□□□□ -0.18
VSIG10-208	ENST00000542011	LMOD2	Q6P5Q4	547 aa		13.92	□□□□□ -0.18
VSIG10-208	ENST00000542011	POLR3A	O14802	1390 aa	Predicted RBP	13.92	□□□□□ -0.18
VSIG10-208	ENST00000542011	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.91	□□□□□ -0.18
VSIG10-208	ENST00000542011	ONECUT3	O60422	494 aa	Predicted RBP	13.9	□□□□□ -0.18
VSIG10-208	ENST00000542011	ATP7B	P35670	1465 aa		13.9	□□□□□ -0.18
VSIG10-208	ENST00000542011	CRYBG1	Q9Y4K1	1723 aa		13.9	□□□□□ -0.18
VSIG10-208	ENST00000542011	PLCH1	Q4KWH8	1693 aa		13.89	□□□□□ -0.19
VSIG10-208	ENST00000542011	NBPF8	Q3BBV2	869 aa		13.89	□□□□□ -0.19
VSIG10-208	ENST00000542011	TOPAZ1	Q8N9V7	1692 aa		13.88	□□□□□ -0.19
VSIG10-208	ENST00000542011	FAM83G	A6ND36	823 aa		13.88	□□□□□ -0.19
VSIG10-208	ENST00000542011	ALS2	Q96Q42	1657 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms