RNA–Protein interactions for RNA: ENST00000541836.5

NPIPA1-206, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 5

Gene NPIPA1, Length 2,747 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-206ENST00000541836 MADDQ8WXG6 1647 aa17.3■□□□□ 0.36
NPIPA1-206ENST00000541836 DDX11L8A8MPP1 907 aa17.3■□□□□ 0.36
NPIPA1-206ENST00000541836 CARD14Q9BXL6 1004 aa17.3■□□□□ 0.36
NPIPA1-206ENST00000541836 HSCBQ8IWL3 235 aa17.29■□□□□ 0.36
NPIPA1-206ENST00000541836 TRIM44Q96DX7 344 aaPredicted RBP17.28■□□□□ 0.36
NPIPA1-206ENST00000541836 RTEL1-TNFRSF6BF6WH68 1400 aa17.28■□□□□ 0.36
NPIPA1-206ENST00000541836 TNNT2P45379 298 aaPredicted RBP17.27■□□□□ 0.36
NPIPA1-206ENST00000541836 TCP11L2Q8N4U5 519 aa17.27■□□□□ 0.36
NPIPA1-206ENST00000541836 SLC24A1O60721 1099 aa17.26■□□□□ 0.35
NPIPA1-206ENST00000541836 RUNDC1Q96C34 613 aa17.26■□□□□ 0.35
NPIPA1-206ENST00000541836 SCAPERQ9BY12 1400 aa17.25■□□□□ 0.35
NPIPA1-206ENST00000541836 MVPQ14764 893 aaKnown RBP17.25■□□□□ 0.35
NPIPA1-206ENST00000541836 ZNF692Q9BU19 519 aaPredicted RBP17.25■□□□□ 0.35
NPIPA1-206ENST00000541836 POLR3AO14802 1390 aaPredicted RBP17.25■□□□□ 0.35
NPIPA1-206ENST00000541836 FTSJ3Q8IY81 847 aaKnown RBP17.25■□□□□ 0.35
NPIPA1-206ENST00000541836 ISY1Q9ULR0 285 aaKnown RBP17.25■□□□□ 0.35
NPIPA1-206ENST00000541836 MAST1Q9Y2H9 1570 aa17.25■□□□□ 0.35
NPIPA1-206ENST00000541836 KDM5AP29375 1690 aaKnown RBP17.25■□□□□ 0.35
NPIPA1-206ENST00000541836 GAS2L3Q86XJ1 694 aa17.23■□□□□ 0.35
NPIPA1-206ENST00000541836 WDR63Q8IWG1 891 aa17.22■□□□□ 0.35
NPIPA1-206ENST00000541836 TNPO1Q92973 898 aaKnown RBP17.22■□□□□ 0.35
NPIPA1-206ENST00000541836 DUOX2Q9NRD8 1548 aa17.22■□□□□ 0.35
NPIPA1-206ENST00000541836 ZKSCAN2Q63HK3 967 aa17.21■□□□□ 0.35
NPIPA1-206ENST00000541836 MORC1Q86VD1 984 aa17.21■□□□□ 0.35
NPIPA1-206ENST00000541836 DZIP1LQ8IYY4 767 aaKnown RBP17.21■□□□□ 0.35
NPIPA1-206ENST00000541836 EFCAB2Q5VUJ9 269 aa17.2■□□□□ 0.34
NPIPA1-206ENST00000541836 PHF23Q9BUL5 403 aaPredicted RBP17.2■□□□□ 0.34
NPIPA1-206ENST00000541836 CEP152O94986 1710 aa17.2■□□□□ 0.34
NPIPA1-206ENST00000541836 ERVK-7P63135 1459 aa17.19■□□□□ 0.34
NPIPA1-206ENST00000541836 DDIT3P35638 169 aa17.19■□□□□ 0.34
NPIPA1-206ENST00000541836 CFAP70Q5T0N1 1121 aa17.19■□□□□ 0.34
NPIPA1-206ENST00000541836 GBP4Q96PP9 640 aa17.19■□□□□ 0.34
NPIPA1-206ENST00000541836 SPHKAPQ2M3C7 1700 aa17.18■□□□□ 0.34
NPIPA1-206ENST00000541836 HSP90AB1P08238 724 aaKnown RBP17.18■□□□□ 0.34
NPIPA1-206ENST00000541836 STAC3Q96MF2 364 aa17.18■□□□□ 0.34
NPIPA1-206ENST00000541836 NCOA3Q9Y6Q9 1424 aa17.18■□□□□ 0.34
NPIPA1-206ENST00000541836 TRAPPC8Q9Y2L5 1435 aa17.17■□□□□ 0.34
NPIPA1-206ENST00000541836 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
NPIPA1-206ENST00000541836 AFAP1Q8N556 730 aa17.17■□□□□ 0.34
NPIPA1-206ENST00000541836 IQSEC2Q5JU85 1478 aa17.16■□□□□ 0.34
NPIPA1-206ENST00000541836 TPM2P07951 284 aa17.16■□□□□ 0.34
NPIPA1-206ENST00000541836 ITPRIPQ8IWB1 547 aa17.16■□□□□ 0.34
NPIPA1-206ENST00000541836 HDAC1Q13547 482 aaPredicted RBP17.16■□□□□ 0.34
NPIPA1-206ENST00000541836 SMC4Q9NTJ3 1288 aa17.16■□□□□ 0.34
NPIPA1-206ENST00000541836 FOXD4L1Q9NU39 408 aa17.15■□□□□ 0.34
NPIPA1-206ENST00000541836 ZCCHC11Q5TAX3 1644 aaKnown RBP17.15■□□□□ 0.34
NPIPA1-206ENST00000541836 SHPRHQ149N8 1683 aa17.15■□□□□ 0.34
NPIPA1-206ENST00000541836 SMC5Q8IY18 1101 aa17.15■□□□□ 0.34
NPIPA1-206ENST00000541836 SNX21Q969T3 373 aa17.15■□□□□ 0.34
NPIPA1-206ENST00000541836 RBM25P49756 843 aaKnown RBP17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 SKOR2Q2VWA4 1001 aaPredicted RBP17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 TSR2Q969E8 191 aaKnown RBP17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 NSD3Q9BZ95 1437 aa17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 PLCH2O75038 1416 aa17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 TRIM27P14373 513 aa17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 MTHFSP49914 203 aa17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 RAB3GAP1Q15042 981 aa17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 CCDC27Q2M243 656 aa17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 KIAA1211Q6ZU35 1233 aa17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 CIZ1Q9ULV3 898 aaPredicted RBP17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 TRPM2O94759 1503 aa17.13■□□□□ 0.33
NPIPA1-206ENST00000541836 DDX19BQ9UMR2 479 aa17.13■□□□□ 0.33
NPIPA1-206ENST00000541836 KANK1Q14678 1352 aa17.12■□□□□ 0.33
NPIPA1-206ENST00000541836 CLTCL1P53675 1640 aa17.11■□□□□ 0.33
NPIPA1-206ENST00000541836 CFAP53Q96M91 514 aa17.11■□□□□ 0.33
NPIPA1-206ENST00000541836 LNPKQ9C0E8 428 aa17.11■□□□□ 0.33
NPIPA1-206ENST00000541836 SLC12A5Q9H2X9 1139 aa17.11■□□□□ 0.33
NPIPA1-206ENST00000541836 U2AF1L5P0DN76 240 aaPredicted RBP17.11■□□□□ 0.33
NPIPA1-206ENST00000541836 NASPP49321 788 aaPredicted RBP17.11■□□□□ 0.33
NPIPA1-206ENST00000541836 U2AF1Q01081 240 aaKnown RBP eCLIP17.11■□□□□ 0.339e-7■□□□□ 9.2
NPIPA1-206ENST00000541836 CCDC173Q0VFZ6 552 aa17.11■□□□□ 0.33
NPIPA1-206ENST00000541836 PDCL3Q9H2J4 239 aa17.11■□□□□ 0.33
NPIPA1-206ENST00000541836 EXOSC9Q06265 439 aaKnown RBP17.1■□□□□ 0.33
NPIPA1-206ENST00000541836 SPAG9O60271 1321 aaKnown RBP17.1■□□□□ 0.33
NPIPA1-206ENST00000541836 ADGRF5Q8IZF2 1346 aa17.1■□□□□ 0.33
NPIPA1-206ENST00000541836 SSH1Q8WYL5 1049 aa17.1■□□□□ 0.33
NPIPA1-206ENST00000541836 ATF7IPQ6VMQ6 1270 aa17.09■□□□□ 0.33
NPIPA1-206ENST00000541836 ANP32BQ92688 251 aaKnown RBP17.09■□□□□ 0.33
NPIPA1-206ENST00000541836 CD2BP2O95400 341 aaKnown RBP17.09■□□□□ 0.33
NPIPA1-206ENST00000541836 PTMSP20962 102 aa17.09■□□□□ 0.33
NPIPA1-206ENST00000541836 PTPRTO14522 1441 aa17.08■□□□□ 0.33
NPIPA1-206ENST00000541836 UHRF1BP1LA0JNW5 1464 aa17.08■□□□□ 0.33
NPIPA1-206ENST00000541836 ZSCAN30Q86W11 494 aa17.08■□□□□ 0.33
NPIPA1-206ENST00000541836 TMEM57Q8N5G2 664 aa17.08■□□□□ 0.32
NPIPA1-206ENST00000541836 PPP1R9BQ96SB3 815 aa17.07■□□□□ 0.32
NPIPA1-206ENST00000541836 NOB1Q9ULX3 412 aaKnown RBP17.07■□□□□ 0.32
NPIPA1-206ENST00000541836 SSFA2P28290 1259 aa17.07■□□□□ 0.32
NPIPA1-206ENST00000541836 ABCC1P33527 1531 aa17.07■□□□□ 0.32
NPIPA1-206ENST00000541836 GOLGA6L22H0YM25 854 aa17.06■□□□□ 0.32
NPIPA1-206ENST00000541836 CT47B1P0C2W7 299 aaPredicted RBP17.06■□□□□ 0.32
NPIPA1-206ENST00000541836 MSNP26038 577 aaKnown RBP17.06■□□□□ 0.32
NPIPA1-206ENST00000541836 NUCB1Q02818 461 aa17.06■□□□□ 0.32
NPIPA1-206ENST00000541836 KIF2CQ99661 725 aa17.06■□□□□ 0.32
NPIPA1-206ENST00000541836 ZNF518AQ6AHZ1 1483 aa17.06■□□□□ 0.32
NPIPA1-206ENST00000541836 KIAA1210Q9ULL0 1709 aa17.06■□□□□ 0.32
NPIPA1-206ENST00000541836 ZBTB40Q9NUA8 1239 aa17.06■□□□□ 0.32
NPIPA1-206ENST00000541836 DDX49Q9Y6V7 483 aaKnown RBP17.06■□□□□ 0.32
NPIPA1-206ENST00000541836 K7ELQ4 463 aaPredicted RBP17.05■□□□□ 0.32
NPIPA1-206ENST00000541836 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
NPIPA1-206ENST00000541836 CHD1LQ86WJ1 897 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms