RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 PPP2R1AP30153 589 aa12.7□□□□□ -0.38
CNOT4-212ENST00000541284 ERICH6Q7L0X2 663 aa12.7□□□□□ -0.38
CNOT4-212ENST00000541284 MED14O60244 1454 aa12.69□□□□□ -0.38
CNOT4-212ENST00000541284 CDC42BPGQ6DT37 1551 aa12.68□□□□□ -0.38
CNOT4-212ENST00000541284 XRN1Q8IZH2 1706 aaKnown RBP12.68□□□□□ -0.38
CNOT4-212ENST00000541284 TCERG1O14776 1098 aaKnown RBP12.68□□□□□ -0.38
CNOT4-212ENST00000541284 C20orf194Q5TEA3 1177 aa12.68□□□□□ -0.38
CNOT4-212ENST00000541284 DUSP27Q5VZP5 1158 aa12.67□□□□□ -0.38
CNOT4-212ENST00000541284 CRBNQ96SW2 442 aa12.67□□□□□ -0.38
CNOT4-212ENST00000541284 BACH2Q9BYV9 841 aa12.67□□□□□ -0.38
CNOT4-212ENST00000541284 KDM2BQ8NHM5 1336 aa12.67□□□□□ -0.38
CNOT4-212ENST00000541284 RPGRIP1LQ68CZ1 1315 aa12.67□□□□□ -0.38
CNOT4-212ENST00000541284 SKAP1Q86WV1 359 aa12.66□□□□□ -0.38
CNOT4-212ENST00000541284 ADGRF5Q8IZF2 1346 aa12.66□□□□□ -0.38
CNOT4-212ENST00000541284 ADAMTSL3P82987 1691 aa12.66□□□□□ -0.38
CNOT4-212ENST00000541284 TECPR2O15040 1411 aa12.66□□□□□ -0.38
CNOT4-212ENST00000541284 SLIT1O75093 1534 aa12.65□□□□□ -0.38
CNOT4-212ENST00000541284 MS4A1P11836 297 aa12.65□□□□□ -0.38
CNOT4-212ENST00000541284 PDE4AP27815 886 aa12.65□□□□□ -0.38
CNOT4-212ENST00000541284 TRMT2AQ8IZ69 625 aaKnown RBP12.65□□□□□ -0.38
CNOT4-212ENST00000541284 KIF3BO15066 747 aa12.65□□□□□ -0.38
CNOT4-212ENST00000541284 PPP6R1Q9UPN7 881 aa12.64□□□□□ -0.39
CNOT4-212ENST00000541284 IQSEC2Q5JU85 1478 aa12.64□□□□□ -0.39
CNOT4-212ENST00000541284 ARHGAP23Q9P227 1491 aa12.64□□□□□ -0.39
CNOT4-212ENST00000541284 RAPGEF3O95398 923 aa12.63□□□□□ -0.39
CNOT4-212ENST00000541284 ANP32AP39687 249 aaKnown RBP12.63□□□□□ -0.39
CNOT4-212ENST00000541284 MYT1LQ9UL68 1186 aa12.63□□□□□ -0.39
CNOT4-212ENST00000541284 COL3A1P02461 1466 aaPredicted RBP12.63□□□□□ -0.39
CNOT4-212ENST00000541284 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.63□□□□□ -0.39
CNOT4-212ENST00000541284 DEKP35659 375 aaKnown RBP12.63□□□□□ -0.39
CNOT4-212ENST00000541284 C14orf93Q9H972 538 aaKnown RBP12.63□□□□□ -0.39
CNOT4-212ENST00000541284 SPINK5Q9NQ38 1064 aaPredicted RBP12.61□□□□□ -0.39
CNOT4-212ENST00000541284 DIP2AQ14689 1571 aa12.61□□□□□ -0.39
CNOT4-212ENST00000541284 PUS7Q96PZ0 661 aaKnown RBP12.6□□□□□ -0.39
CNOT4-212ENST00000541284 CARD14Q9BXL6 1004 aa12.6□□□□□ -0.39
CNOT4-212ENST00000541284 KNSTRNQ9Y448 316 aa12.6□□□□□ -0.39
CNOT4-212ENST00000541284 ITSN1Q15811 1721 aa12.6□□□□□ -0.39
CNOT4-212ENST00000541284 RGPD1P0DJD0 1748 aa12.6□□□□□ -0.39
CNOT4-212ENST00000541284 SLFN5Q08AF3 891 aa12.6□□□□□ -0.39
CNOT4-212ENST00000541284 NBR1Q14596 966 aa12.59□□□□□ -0.39
CNOT4-212ENST00000541284 ZBTB47Q9UFB7 747 aaPredicted RBP12.58□□□□□ -0.4
CNOT4-212ENST00000541284 CFAP70Q5T0N1 1121 aa12.58□□□□□ -0.4
CNOT4-212ENST00000541284 EIF3AQ14152 1382 aaKnown RBP12.58□□□□□ -0.4
CNOT4-212ENST00000541284 VIRMAQ69YN4 1812 aaKnown RBP12.57□□□□□ -0.4
CNOT4-212ENST00000541284 DMRT2Q9Y5R5 561 aa12.57□□□□□ -0.4
CNOT4-212ENST00000541284 NPM1P06748 294 aaKnown RBP eCLIP12.56□□□□□ -0.4
CNOT4-212ENST00000541284 CDCA8Q53HL2 280 aa12.56□□□□□ -0.4
CNOT4-212ENST00000541284 LRRC7Q96NW7 1537 aa12.56□□□□□ -0.4
CNOT4-212ENST00000541284 GOLGA2Q08379 1002 aa12.55□□□□□ -0.4
CNOT4-212ENST00000541284 NKTRP30414 1462 aaKnown RBP12.55□□□□□ -0.4
CNOT4-212ENST00000541284 CHD2O14647 1828 aaKnown RBP12.55□□□□□ -0.4
CNOT4-212ENST00000541284 WDR43Q15061 677 aaKnown RBP eCLIP12.54□□□□□ -0.4
CNOT4-212ENST00000541284 CCDC146Q8IYE0 955 aa12.54□□□□□ -0.4
CNOT4-212ENST00000541284 FMN2Q9NZ56 1722 aa12.53□□□□□ -0.4
CNOT4-212ENST00000541284 C8orf34Q49A92 452 aa12.53□□□□□ -0.4
CNOT4-212ENST00000541284 POLR3AO14802 1390 aaPredicted RBP12.53□□□□□ -0.4
CNOT4-212ENST00000541284 NPM2Q86SE8 214 aaKnown RBP12.53□□□□□ -0.4
CNOT4-212ENST00000541284 CENPQQ7L2Z9 268 aaPredicted RBP12.52□□□□□ -0.41
CNOT4-212ENST00000541284 SLC52A1Q9NWF4 448 aa12.52□□□□□ -0.41
CNOT4-212ENST00000541284 YTHDC2Q9H6S0 1430 aaKnown RBP12.52□□□□□ -0.41
CNOT4-212ENST00000541284 APAF1O14727 1248 aa12.51□□□□□ -0.41
CNOT4-212ENST00000541284 ADAMTS13Q76LX8 1427 aa12.51□□□□□ -0.41
CNOT4-212ENST00000541284 PHRF1Q9P1Y6 1649 aaKnown RBP12.51□□□□□ -0.41
CNOT4-212ENST00000541284 CYB5RLQ6IPT4 315 aa12.51□□□□□ -0.41
CNOT4-212ENST00000541284 RGPD8O14715 1765 aaPredicted RBP12.51□□□□□ -0.41
CNOT4-212ENST00000541284 NINLQ9Y2I6 1382 aa12.49□□□□□ -0.41
CNOT4-212ENST00000541284 BCAR3O75815 825 aa12.49□□□□□ -0.41
CNOT4-212ENST00000541284 FAM135BQ49AJ0 1406 aa12.49□□□□□ -0.41
CNOT4-212ENST00000541284 ATP7BP35670 1465 aa12.49□□□□□ -0.41
CNOT4-212ENST00000541284 MAP2P11137 1827 aaKnown RBP12.49□□□□□ -0.41
CNOT4-212ENST00000541284 IDI1Q13907 227 aa12.49□□□□□ -0.41
CNOT4-212ENST00000541284 PHF23Q9BUL5 403 aaPredicted RBP12.49□□□□□ -0.41
CNOT4-212ENST00000541284 FAM69CQ0P6D2 419 aa12.48□□□□□ -0.41
CNOT4-212ENST00000541284 DLG5Q8TDM6 1919 aa12.48□□□□□ -0.41
CNOT4-212ENST00000541284 NWD1Q149M9 1564 aa12.48□□□□□ -0.41
CNOT4-212ENST00000541284 NSD3Q9BZ95 1437 aa12.48□□□□□ -0.41
CNOT4-212ENST00000541284 ABCC11Q96J66 1382 aa12.47□□□□□ -0.41
CNOT4-212ENST00000541284 CPSF1Q10570 1443 aaKnown RBP12.47□□□□□ -0.41
CNOT4-212ENST00000541284 PEAK1Q9H792 1746 aa12.47□□□□□ -0.41
CNOT4-212ENST00000541284 E9PSI1 815 aa12.46□□□□□ -0.41
CNOT4-212ENST00000541284 LAS1LQ9Y4W2 734 aaKnown RBP12.46□□□□□ -0.42
CNOT4-212ENST00000541284 CEP170BQ9Y4F5 1589 aaPredicted RBP12.46□□□□□ -0.42
CNOT4-212ENST00000541284 ANKRD36BQ8N2N9 1353 aa12.45□□□□□ -0.42
CNOT4-212ENST00000541284 CENPJQ9HC77 1338 aaPredicted RBP12.45□□□□□ -0.42
CNOT4-212ENST00000541284 IGHDP01880 384 aa12.45□□□□□ -0.42
CNOT4-212ENST00000541284 CRYBG1Q9Y4K1 1723 aa12.45□□□□□ -0.42
CNOT4-212ENST00000541284 RIMS2Q9UQ26 1411 aa12.45□□□□□ -0.42
CNOT4-212ENST00000541284 WWC1Q8IX03 1113 aa12.45□□□□□ -0.42
CNOT4-212ENST00000541284 USP19O94966 1318 aa12.45□□□□□ -0.42
CNOT4-212ENST00000541284 SLC24A1O60721 1099 aa12.44□□□□□ -0.42
CNOT4-212ENST00000541284 NSD2O96028 1365 aa12.44□□□□□ -0.42
CNOT4-212ENST00000541284 FAM161AQ3B820 660 aa12.44□□□□□ -0.42
CNOT4-212ENST00000541284 ZMYM3Q14202 1370 aa12.44□□□□□ -0.42
CNOT4-212ENST00000541284 NGEFQ8N5V2 710 aa12.44□□□□□ -0.42
CNOT4-212ENST00000541284 N4BP2Q86UW6 1770 aaPredicted RBP12.43□□□□□ -0.42
CNOT4-212ENST00000541284 PIK3C2AO00443 1686 aa12.43□□□□□ -0.42
CNOT4-212ENST00000541284 USP35Q9P2H5 1018 aa12.43□□□□□ -0.42
CNOT4-212ENST00000541284 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.42□□□□□ -0.42
CNOT4-212ENST00000541284 SLC12A5Q9H2X9 1139 aa12.42□□□□□ -0.42
CNOT4-212ENST00000541284 PNPLA6Q8IY17 1366 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms