RNA–Protein interactions for RNA: ENST00000541167.5

RAP1B-223, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-223	ENST00000541167	CDC42BPG	Q6DT37	1551 aa		28.9	■■■□□ 2.22
RAP1B-223	ENST00000541167	SIRT1	Q96EB6	747 aa		28.89	■■■□□ 2.22
RAP1B-223	ENST00000541167	TONSL	Q96HA7	1378 aa		28.88	■■■□□ 2.21
RAP1B-223	ENST00000541167	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28.87	■■■□□ 2.21
RAP1B-223	ENST00000541167	TRAK1	Q9UPV9	953 aa		28.87	■■■□□ 2.21
RAP1B-223	ENST00000541167	PRAM1	Q96QH2	718 aa		28.86	■■■□□ 2.21
RAP1B-223	ENST00000541167	PHLPP1	O60346	1717 aa		28.86	■■■□□ 2.21
RAP1B-223	ENST00000541167	TRPM1	Q7Z4N2	1603 aa		28.85	■■■□□ 2.21
RAP1B-223	ENST00000541167	POGK	Q9P215	609 aa		28.84	■■■□□ 2.21
RAP1B-223	ENST00000541167	SAFB2	Q14151	953 aa	Known RBP eCLIP	28.82	■■■□□ 2.2
RAP1B-223	ENST00000541167	FMN2	Q9NZ56	1722 aa		28.81	■■■□□ 2.2
RAP1B-223	ENST00000541167	C1orf167	Q5SNV9	1468 aa		28.81	■■■□□ 2.2
RAP1B-223	ENST00000541167	NBPF1	Q3BBV0	1214 aa		28.8	■■■□□ 2.2
RAP1B-223	ENST00000541167	BRINP3	Q76B58	766 aa		28.8	■■■□□ 2.2
RAP1B-223	ENST00000541167	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.79	■■■□□ 2.2
RAP1B-223	ENST00000541167	NHSL1	Q5SYE7	1610 aa		28.77	■■■□□ 2.2
RAP1B-223	ENST00000541167	ADGRB2	O60241	1585 aa		28.77	■■■□□ 2.2
RAP1B-223	ENST00000541167	COL16A1	Q07092	1604 aa	Predicted RBP	28.76	■■■□□ 2.19
RAP1B-223	ENST00000541167	CLSPN	Q9HAW4	1339 aa		28.73	■■■□□ 2.19
RAP1B-223	ENST00000541167	NUTM2F	A1L443	756 aa		28.72	■■■□□ 2.19
RAP1B-223	ENST00000541167	NBPF8	Q3BBV2	869 aa		28.72	■■■□□ 2.19
RAP1B-223	ENST00000541167	ROCK2	O75116	1388 aa	Known RBP	28.72	■■■□□ 2.19
RAP1B-223	ENST00000541167	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.71	■■■□□ 2.19
RAP1B-223	ENST00000541167	RGPD8	O14715	1765 aa	Predicted RBP	28.71	■■■□□ 2.19
RAP1B-223	ENST00000541167	CCER1	Q8TC90	406 aa	Predicted RBP	28.7	■■■□□ 2.18
RAP1B-223	ENST00000541167	ORAI2	Q96SN7	254 aa		28.7	■■■□□ 2.18
RAP1B-223	ENST00000541167	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.69	■■■□□ 2.18
RAP1B-223	ENST00000541167	MED1	Q15648	1581 aa	Predicted RBP	28.69	■■■□□ 2.18
RAP1B-223	ENST00000541167	ESCO1	Q5FWF5	840 aa		28.67	■■■□□ 2.18
RAP1B-223	ENST00000541167	QRICH2	Q9H0J4	1663 aa		28.66	■■■□□ 2.18
RAP1B-223	ENST00000541167	KIF1A	Q12756	1690 aa		28.65	■■■□□ 2.18
RAP1B-223	ENST00000541167	RALGAPB	Q86X10	1494 aa		28.65	■■■□□ 2.18
RAP1B-223	ENST00000541167	DDX17	Q92841	729 aa	Known RBP	28.64	■■■□□ 2.18
RAP1B-223	ENST00000541167	USP32	Q8NFA0	1604 aa		28.64	■■■□□ 2.18
RAP1B-223	ENST00000541167	JCAD	Q9P266	1359 aa		28.62	■■■□□ 2.17
RAP1B-223	ENST00000541167	PHF23	Q9BUL5	403 aa	Predicted RBP	28.62	■■■□□ 2.17
RAP1B-223	ENST00000541167	CENPJ	Q9HC77	1338 aa	Predicted RBP	28.62	■■■□□ 2.17
RAP1B-223	ENST00000541167	EIF3A	Q14152	1382 aa	Known RBP	28.62	■■■□□ 2.17
RAP1B-223	ENST00000541167	GPRASP1	Q5JY77	1395 aa		28.62	■■■□□ 2.17
RAP1B-223	ENST00000541167	ANKAR	Q7Z5J8	1434 aa		28.61	■■■□□ 2.17
RAP1B-223	ENST00000541167	SHPRH	Q149N8	1683 aa		28.61	■■■□□ 2.17
RAP1B-223	ENST00000541167	TULP4	Q9NRJ4	1543 aa		28.61	■■■□□ 2.17
RAP1B-223	ENST00000541167	WASL	O00401	505 aa	Predicted RBP	28.6	■■■□□ 2.17
RAP1B-223	ENST00000541167	ITSN1	Q15811	1721 aa		28.57	■■■□□ 2.16
RAP1B-223	ENST00000541167	NPHP3	Q7Z494	1330 aa		28.56	■■■□□ 2.16
RAP1B-223	ENST00000541167	CARD11	Q9BXL7	1154 aa		28.56	■■■□□ 2.16
RAP1B-223	ENST00000541167	TIMELESS	Q9UNS1	1208 aa		28.55	■■■□□ 2.16
RAP1B-223	ENST00000541167	FOXO3	O43524	673 aa		28.54	■■■□□ 2.16
RAP1B-223	ENST00000541167	PHF8	Q9UPP1	1060 aa		28.54	■■■□□ 2.16
RAP1B-223	ENST00000541167	SOS2	Q07890	1332 aa	Predicted RBP	28.53	■■■□□ 2.16
RAP1B-223	ENST00000541167	PRR36	Q9H6K5	1346 aa		28.53	■■■□□ 2.16
RAP1B-223	ENST00000541167	LRRC59	Q96AG4	307 aa	Known RBP	28.53	■■■□□ 2.16
RAP1B-223	ENST00000541167	PXDN	Q92626	1479 aa		28.53	■■■□□ 2.16
RAP1B-223	ENST00000541167	ATP7B	P35670	1465 aa		28.52	■■■□□ 2.16
RAP1B-223	ENST00000541167	CDK19	Q9BWU1	502 aa		28.51	■■■□□ 2.15
RAP1B-223	ENST00000541167	XPC	Q01831	940 aa	Predicted RBP	28.5	■■■□□ 2.15
RAP1B-223	ENST00000541167	TOPAZ1	Q8N9V7	1692 aa		28.48	■■■□□ 2.15
RAP1B-223	ENST00000541167	SPATA31A6	Q5VVP1	1343 aa		28.48	■■■□□ 2.15
RAP1B-223	ENST00000541167	PMFBP1	Q8TBY8	1022 aa		28.47	■■■□□ 2.15
RAP1B-223	ENST00000541167	NUDT16	Q96DE0	195 aa	Known RBP	28.47	■■■□□ 2.15
RAP1B-223	ENST00000541167	PNPLA6	Q8IY17	1366 aa		28.47	■■■□□ 2.15
RAP1B-223	ENST00000541167	SRPK2	P78362	688 aa	Known RBP	28.45	■■■□□ 2.14
RAP1B-223	ENST00000541167	LRP6	O75581	1613 aa		28.43	■■■□□ 2.14
RAP1B-223	ENST00000541167	KRT28	Q7Z3Y7	464 aa		28.43	■■■□□ 2.14
RAP1B-223	ENST00000541167	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.42	■■■□□ 2.14
RAP1B-223	ENST00000541167	EVC2	Q86UK5	1308 aa		28.42	■■■□□ 2.14
RAP1B-223	ENST00000541167	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.4	■■■□□ 2.14
RAP1B-223	ENST00000541167	NUTM2E	B1AL46	878 aa	Predicted RBP	28.4	■■■□□ 2.14
RAP1B-223	ENST00000541167	PSME1	Q06323	249 aa		28.4	■■■□□ 2.14
RAP1B-223	ENST00000541167	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.4	■■■□□ 2.14
RAP1B-223	ENST00000541167	CABP2	Q9NPB3	220 aa		28.4	■■■□□ 2.14
RAP1B-223	ENST00000541167	SBNO2	Q9Y2G9	1366 aa		28.38	■■■□□ 2.13
RAP1B-223	ENST00000541167	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.38	■■■□□ 2.13
RAP1B-223	ENST00000541167	NGDN	Q8NEJ9	315 aa	Known RBP	28.38	■■■□□ 2.13
RAP1B-223	ENST00000541167	CCDC61	Q9Y6R9	512 aa		28.38	■■■□□ 2.13
RAP1B-223	ENST00000541167	MEX3C	Q5U5Q3	659 aa	Known RBP	28.37	■■■□□ 2.13
RAP1B-223	ENST00000541167	TNS3	Q68CZ2	1445 aa		28.36	■■■□□ 2.13
RAP1B-223	ENST00000541167	SPATA31A3	Q5VYP0	1347 aa		28.36	■■■□□ 2.13
RAP1B-223	ENST00000541167	PPIP5K1	Q6PFW1	1433 aa		28.35	■■■□□ 2.13
RAP1B-223	ENST00000541167	SBNO1	A3KN83	1393 aa		28.35	■■■□□ 2.13
RAP1B-223	ENST00000541167	USP47	Q96K76	1375 aa		28.33	■■■□□ 2.13
RAP1B-223	ENST00000541167	ALS2	Q96Q42	1657 aa		28.31	■■■□□ 2.12
RAP1B-223	ENST00000541167	POLR3A	O14802	1390 aa	Predicted RBP	28.3	■■■□□ 2.12
RAP1B-223	ENST00000541167	ACE	P12821	1306 aa		28.3	■■■□□ 2.12
RAP1B-223	ENST00000541167	ST20-MTHFS	A0A0A6YYL1	179 aa		28.3	■■■□□ 2.12
RAP1B-223	ENST00000541167	PLEKHG3	A1L390	1219 aa		28.3	■■■□□ 2.12
RAP1B-223	ENST00000541167	LMOD2	Q6P5Q4	547 aa		28.29	■■■□□ 2.12
RAP1B-223	ENST00000541167	ARHGEF10	O15013	1369 aa		28.28	■■■□□ 2.12
RAP1B-223	ENST00000541167	ATAD2	Q6PL18	1390 aa		28.27	■■■□□ 2.12
RAP1B-223	ENST00000541167	MARF1	Q9Y4F3	1742 aa	Known RBP	28.27	■■■□□ 2.12
RAP1B-223	ENST00000541167	ABCA3	Q99758	1704 aa		28.26	■■■□□ 2.12
RAP1B-223	ENST00000541167	PAK3	O75914	559 aa	Predicted RBP	28.25	■■■□□ 2.11
RAP1B-223	ENST00000541167	ADAMTS2	O95450	1211 aa		28.25	■■■□□ 2.11
RAP1B-223	ENST00000541167	CABP1	Q9NZU7	370 aa		28.25	■■■□□ 2.11
RAP1B-223	ENST00000541167	TESK2	Q96S53	571 aa		28.24	■■■□□ 2.11
RAP1B-223	ENST00000541167	RGS17	Q9UGC6	210 aa	Predicted RBP	28.24	■■■□□ 2.11
RAP1B-223	ENST00000541167	PLEKHG5	O94827	1062 aa		28.23	■■■□□ 2.11
RAP1B-223	ENST00000541167	AKAP12	Q02952	1782 aa		28.23	■■■□□ 2.11
RAP1B-223	ENST00000541167	C8orf37	Q96NL8	207 aa		28.21	■■■□□ 2.11
RAP1B-223	ENST00000541167	HAP1	P54257	671 aa	Predicted RBP	28.2	■■■□□ 2.1

Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms