RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 PIP4K2BP78356 416 aa21.96■■□□□ 1.11
DDB1-218ENST00000540784 GPRASP1Q5JY77 1395 aa21.96■■□□□ 1.11
DDB1-218ENST00000540784 RALGAPBQ86X10 1494 aa21.96■■□□□ 1.11
DDB1-218ENST00000540784 KNDC1Q76NI1 1749 aa21.95■■□□□ 1.1
DDB1-218ENST00000540784 ADGRL3Q9HAR2 1447 aa21.95■■□□□ 1.1
DDB1-218ENST00000540784 SCAF1Q9H7N4 1312 aaKnown RBP21.94■■□□□ 1.1
DDB1-218ENST00000540784 MINK1Q8N4C8 1332 aaPredicted RBP21.93■■□□□ 1.1
DDB1-218ENST00000540784 CENPJQ9HC77 1338 aaPredicted RBP21.93■■□□□ 1.1
DDB1-218ENST00000540784 HIRIP3Q9BW71 556 aaPredicted RBP21.92■■□□□ 1.1
DDB1-218ENST00000540784 DCCP43146 1447 aa21.9■■□□□ 1.1
DDB1-218ENST00000540784 EIF3AQ14152 1382 aaKnown RBP21.9■■□□□ 1.1
DDB1-218ENST00000540784 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.89■■□□□ 1.1
DDB1-218ENST00000540784 NUTM2FA1L443 756 aa21.87■■□□□ 1.09
DDB1-218ENST00000540784 WASLO00401 505 aaPredicted RBP21.87■■□□□ 1.09
DDB1-218ENST00000540784 CDK19Q9BWU1 502 aa21.85■■□□□ 1.09
DDB1-218ENST00000540784 NALCNQ8IZF0 1738 aa21.85■■□□□ 1.09
DDB1-218ENST00000540784 ARHGEF28Q8N1W1 1705 aaKnown RBP21.84■■□□□ 1.09
DDB1-218ENST00000540784 ST20-MTHFSA0A0A6YYL1 179 aa21.84■■□□□ 1.09
DDB1-218ENST00000540784 MST1RQ04912 1400 aa21.82■■□□□ 1.08
DDB1-218ENST00000540784 ESCO1Q5FWF5 840 aa21.82■■□□□ 1.08
DDB1-218ENST00000540784 ILDR1Q86SU0 546 aaPredicted RBP21.82■■□□□ 1.08
DDB1-218ENST00000540784 SLC24A1O60721 1099 aa21.81■■□□□ 1.08
DDB1-218ENST00000540784 ORAI2Q96SN7 254 aa21.81■■□□□ 1.08
DDB1-218ENST00000540784 USP47Q96K76 1375 aa21.81■■□□□ 1.08
DDB1-218ENST00000540784 CDC42BPGQ6DT37 1551 aa21.8■■□□□ 1.08
DDB1-218ENST00000540784 C1orf167Q5SNV9 1468 aa21.8■■□□□ 1.08
DDB1-218ENST00000540784 BRINP3Q76B58 766 aa21.8■■□□□ 1.08
DDB1-218ENST00000540784 EVC2Q86UK5 1308 aa21.8■■□□□ 1.08
DDB1-218ENST00000540784 SRPK2P78362 688 aaKnown RBP21.79■■□□□ 1.08
DDB1-218ENST00000540784 EIF4G2P78344 907 aaKnown RBP eCLIP21.78■■□□□ 1.08
DDB1-218ENST00000540784 ZEB1P37275 1124 aaPredicted RBP21.77■■□□□ 1.08
DDB1-218ENST00000540784 NUDT16Q96DE0 195 aaKnown RBP21.77■■□□□ 1.08
DDB1-218ENST00000540784 CABP2Q9NPB3 220 aa21.76■■□□□ 1.07
DDB1-218ENST00000540784 ADGRB2O60241 1585 aa21.75■■□□□ 1.07
DDB1-218ENST00000540784 TESK2Q96S53 571 aa21.75■■□□□ 1.07
DDB1-218ENST00000540784 HSPA1LP34931 641 aa21.74■■□□□ 1.07
DDB1-218ENST00000540784 PHF8Q9UPP1 1060 aa21.74■■□□□ 1.07
DDB1-218ENST00000540784 SBNO2Q9Y2G9 1366 aa21.74■■□□□ 1.07
DDB1-218ENST00000540784 ANKARQ7Z5J8 1434 aa21.73■■□□□ 1.07
DDB1-218ENST00000540784 QRICH2Q9H0J4 1663 aa21.73■■□□□ 1.07
DDB1-218ENST00000540784 HSPA5P11021 654 aaKnown RBP21.73■■□□□ 1.07
DDB1-218ENST00000540784 CCDC61Q9Y6R9 512 aa21.73■■□□□ 1.07
DDB1-218ENST00000540784 PRR36Q9H6K5 1346 aa21.73■■□□□ 1.07
DDB1-218ENST00000540784 FMN2Q9NZ56 1722 aa21.72■■□□□ 1.07
DDB1-218ENST00000540784 FOXO3O43524 673 aa21.71■■□□□ 1.07
DDB1-218ENST00000540784 TMF1P82094 1093 aa21.71■■□□□ 1.07
DDB1-218ENST00000540784 PMFBP1Q8TBY8 1022 aa21.71■■□□□ 1.07
DDB1-218ENST00000540784 ROBO1Q9Y6N7 1651 aa21.71■■□□□ 1.07
DDB1-218ENST00000540784 DDX17Q92841 729 aaKnown RBP21.7■■□□□ 1.06
DDB1-218ENST00000540784 TULP4Q9NRJ4 1543 aa21.7■■□□□ 1.06
DDB1-218ENST00000540784 PSME1Q06323 249 aa21.68■■□□□ 1.06
DDB1-218ENST00000540784 NGDNQ8NEJ9 315 aaKnown RBP21.68■■□□□ 1.06
DDB1-218ENST00000540784 PUS7Q96PZ0 661 aaKnown RBP21.68■■□□□ 1.06
DDB1-218ENST00000540784 NPHP3Q7Z494 1330 aa21.67■■□□□ 1.06
DDB1-218ENST00000540784 PLEKHG3A1L390 1219 aa21.66■■□□□ 1.06
DDB1-218ENST00000540784 CDCA8Q53HL2 280 aa21.66■■□□□ 1.06
DDB1-218ENST00000540784 CABP1Q9NZU7 370 aa21.66■■□□□ 1.06
DDB1-218ENST00000540784 KRT28Q7Z3Y7 464 aa21.65■■□□□ 1.06
DDB1-218ENST00000540784 ATAD2Q6PL18 1390 aa21.63■■□□□ 1.05
DDB1-218ENST00000540784 XPCQ01831 940 aaPredicted RBP21.63■■□□□ 1.05
DDB1-218ENST00000540784 TMC1Q8TDI8 760 aa21.63■■□□□ 1.05
DDB1-218ENST00000540784 LRRC59Q96AG4 307 aaKnown RBP21.63■■□□□ 1.05
DDB1-218ENST00000540784 ATP7BP35670 1465 aa21.63■■□□□ 1.05
DDB1-218ENST00000540784 USP32Q8NFA0 1604 aa21.62■■□□□ 1.05
DDB1-218ENST00000540784 SOS2Q07890 1332 aaPredicted RBP21.62■■□□□ 1.05
DDB1-218ENST00000540784 RGPD8O14715 1765 aaPredicted RBP21.62■■□□□ 1.05
DDB1-218ENST00000540784 PPIP5K1Q6PFW1 1433 aa21.62■■□□□ 1.05
DDB1-218ENST00000540784 ACEP12821 1306 aa21.61■■□□□ 1.05
DDB1-218ENST00000540784 DISP3Q9P2K9 1392 aa21.61■■□□□ 1.05
DDB1-218ENST00000540784 AHDC1Q5TGY3 1603 aaPredicted RBP21.59■■□□□ 1.05
DDB1-218ENST00000540784 ZNF692Q9BU19 519 aaPredicted RBP21.58■■□□□ 1.05
DDB1-218ENST00000540784 SLC12A5Q9H2X9 1139 aa21.58■■□□□ 1.05
DDB1-218ENST00000540784 PHLPP1O60346 1717 aa21.58■■□□□ 1.04
DDB1-218ENST00000540784 KIF1AQ12756 1690 aa21.57■■□□□ 1.04
DDB1-218ENST00000540784 POLR3GLQ9BT43 218 aa21.57■■□□□ 1.04
DDB1-218ENST00000540784 POLR3AO14802 1390 aaPredicted RBP21.56■■□□□ 1.04
DDB1-218ENST00000540784 PAK3O75914 559 aaPredicted RBP21.55■■□□□ 1.04
DDB1-218ENST00000540784 NHSL1Q5SYE7 1610 aa21.55■■□□□ 1.04
DDB1-218ENST00000540784 JCADQ9P266 1359 aa21.54■■□□□ 1.04
DDB1-218ENST00000540784 LMOD2Q6P5Q4 547 aa21.54■■□□□ 1.04
DDB1-218ENST00000540784 TERF2IPQ9NYB0 399 aa21.54■■□□□ 1.04
DDB1-218ENST00000540784 PXDNQ92626 1479 aa21.53■■□□□ 1.04
DDB1-218ENST00000540784 ITSN1Q15811 1721 aa21.53■■□□□ 1.04
DDB1-218ENST00000540784 C11orf95C9JLR9 678 aaPredicted RBP21.53■■□□□ 1.04
DDB1-218ENST00000540784 HDGFL2Q7Z4V5 671 aaPredicted RBP21.53■■□□□ 1.04
DDB1-218ENST00000540784 SPATA31A3Q5VYP0 1347 aa21.53■■□□□ 1.04
DDB1-218ENST00000540784 SBNO1A3KN83 1393 aa21.52■■□□□ 1.04
DDB1-218ENST00000540784 COL16A1Q07092 1604 aaPredicted RBP21.51■■□□□ 1.03
DDB1-218ENST00000540784 NINLQ9Y2I6 1382 aa21.5■■□□□ 1.03
DDB1-218ENST00000540784 TOPAZ1Q8N9V7 1692 aa21.5■■□□□ 1.03
DDB1-218ENST00000540784 KTN1Q86UP2 1357 aaKnown RBP21.48■■□□□ 1.03
DDB1-218ENST00000540784 BRD4O60885 1362 aaPredicted RBP21.48■■□□□ 1.03
DDB1-218ENST00000540784 CPSF1Q10570 1443 aaKnown RBP21.46■■□□□ 1.03
DDB1-218ENST00000540784 NUTM2BA6NNL0 878 aaPredicted RBP21.46■■□□□ 1.03
DDB1-218ENST00000540784 NUTM2EB1AL46 878 aaPredicted RBP21.46■■□□□ 1.03
DDB1-218ENST00000540784 NUTM2AQ8IVF1 878 aaPredicted RBP21.46■■□□□ 1.03
DDB1-218ENST00000540784 ABTB2Q8N961 1025 aa21.46■■□□□ 1.03
DDB1-218ENST00000540784 SPATA31A6Q5VVP1 1343 aa21.46■■□□□ 1.03
DDB1-218ENST00000540784 PNPLA6Q8IY17 1366 aa21.46■■□□□ 1.03
DDB1-218ENST00000540784 KIF7Q2M1P5 1343 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms