RNA–Protein interactions for RNA: ENST00000540708.5

ARL6IP4-218, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, human

TSL 2

Gene ARL6IP4, Length 1,782 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL6IP4-218	ENST00000540708	ADAMTS13	Q76LX8	1427 aa		33.66	■■■□□ 2.98
ARL6IP4-218	ENST00000540708	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.65	■■■□□ 2.98
ARL6IP4-218	ENST00000540708	HNRNPU	Q00839	825 aa	Known RBP eCLIP	33.65	■■■□□ 2.98
ARL6IP4-218	ENST00000540708	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	33.65	■■■□□ 2.98
ARL6IP4-218	ENST00000540708	KNDC1	Q76NI1	1749 aa		33.64	■■■□□ 2.98
ARL6IP4-218	ENST00000540708	SIRT1	Q96EB6	747 aa		33.62	■■■□□ 2.97
ARL6IP4-218	ENST00000540708	SLC12A5	Q9H2X9	1139 aa		33.62	■■■□□ 2.97
ARL6IP4-218	ENST00000540708	TECPR2	O15040	1411 aa		33.62	■■■□□ 2.97
ARL6IP4-218	ENST00000540708	CABP2	Q9NPB3	220 aa		33.62	■■■□□ 2.97
ARL6IP4-218	ENST00000540708	CARD14	Q9BXL6	1004 aa		33.61	■■■□□ 2.97
ARL6IP4-218	ENST00000540708	NINL	Q9Y2I6	1382 aa		33.6	■■■□□ 2.97
ARL6IP4-218	ENST00000540708	SRPK2	P78362	688 aa	Known RBP	33.6	■■■□□ 2.97
ARL6IP4-218	ENST00000540708	PNISR	Q8TF01	805 aa	Known RBP	33.6	■■■□□ 2.97
ARL6IP4-218	ENST00000540708	FAM135B	Q49AJ0	1406 aa		33.59	■■■□□ 2.97
ARL6IP4-218	ENST00000540708	ATAD2	Q6PL18	1390 aa		33.59	■■■□□ 2.97
ARL6IP4-218	ENST00000540708	MED14	O60244	1454 aa		33.59	■■■□□ 2.97
ARL6IP4-218	ENST00000540708	WAPL	Q7Z5K2	1190 aa		33.58	■■■□□ 2.97
ARL6IP4-218	ENST00000540708	CPS1	P31327	1500 aa		33.58	■■■□□ 2.97
ARL6IP4-218	ENST00000540708	SCAF1	Q9H7N4	1312 aa	Known RBP	33.56	■■■□□ 2.96
ARL6IP4-218	ENST00000540708	PLEKHH1	Q9ULM0	1364 aa		33.56	■■■□□ 2.96
ARL6IP4-218	ENST00000540708	ZNF142	P52746	1687 aa	Predicted RBP	33.54	■■■□□ 2.96
ARL6IP4-218	ENST00000540708	ANKRD36B	Q8N2N9	1353 aa		33.54	■■■□□ 2.96
ARL6IP4-218	ENST00000540708	NSD3	Q9BZ95	1437 aa		33.54	■■■□□ 2.96
ARL6IP4-218	ENST00000540708	CDK19	Q9BWU1	502 aa		33.53	■■■□□ 2.96
ARL6IP4-218	ENST00000540708	DIP2A	Q14689	1571 aa		33.52	■■■□□ 2.96
ARL6IP4-218	ENST00000540708	TBX22	Q9Y458	520 aa		33.52	■■■□□ 2.96
ARL6IP4-218	ENST00000540708	GTF3C3	Q9Y5Q9	886 aa		33.52	■■■□□ 2.96
ARL6IP4-218	ENST00000540708	SETD1B	Q9UPS6	1966 aa	Known RBP	33.5	■■■□□ 2.95
ARL6IP4-218	ENST00000540708	SLC26A8	Q96RN1	970 aa		33.49	■■■□□ 2.95
ARL6IP4-218	ENST00000540708	USP32	Q8NFA0	1604 aa		33.49	■■■□□ 2.95
ARL6IP4-218	ENST00000540708	PPP2R1A	P30153	589 aa		33.49	■■■□□ 2.95
ARL6IP4-218	ENST00000540708	ROBO2	Q9HCK4	1378 aa		33.44	■■■□□ 2.94
ARL6IP4-218	ENST00000540708	CGNL1	Q0VF96	1302 aa		33.43	■■■□□ 2.94
ARL6IP4-218	ENST00000540708	TERF2IP	Q9NYB0	399 aa		33.43	■■■□□ 2.94
ARL6IP4-218	ENST00000540708	ZBED9	Q6R2W3	1325 aa		33.42	■■■□□ 2.94
ARL6IP4-218	ENST00000540708	WASL	O00401	505 aa	Predicted RBP	33.42	■■■□□ 2.94
ARL6IP4-218	ENST00000540708	PTPRU	Q92729	1446 aa		33.41	■■■□□ 2.94
ARL6IP4-218	ENST00000540708		A0A1W2PP64	1363 aa		33.4	■■■□□ 2.94
ARL6IP4-218	ENST00000540708	ANKLE2	Q86XL3	938 aa		33.4	■■■□□ 2.94
ARL6IP4-218	ENST00000540708	NSD2	O96028	1365 aa		33.38	■■■□□ 2.93
ARL6IP4-218	ENST00000540708	AMOTL2	Q9Y2J4	779 aa		33.37	■■■□□ 2.93
ARL6IP4-218	ENST00000540708	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.36	■■■□□ 2.93
ARL6IP4-218	ENST00000540708	CD163L1	Q9NR16	1453 aa		33.36	■■■□□ 2.93
ARL6IP4-218	ENST00000540708	MORC1	Q86VD1	984 aa		33.35	■■■□□ 2.93
ARL6IP4-218	ENST00000540708	CABP1	Q9NZU7	370 aa		33.35	■■■□□ 2.93
ARL6IP4-218	ENST00000540708	INSR	P06213	1382 aa		33.34	■■■□□ 2.93
ARL6IP4-218	ENST00000540708	PIK3R4	Q99570	1358 aa		33.34	■■■□□ 2.93
ARL6IP4-218	ENST00000540708	PTCH1	Q13635	1447 aa		33.34	■■■□□ 2.93
ARL6IP4-218	ENST00000540708	ADGRB2	O60241	1585 aa		33.34	■■■□□ 2.93
ARL6IP4-218	ENST00000540708	ATP7B	P35670	1465 aa		33.32	■■■□□ 2.93
ARL6IP4-218	ENST00000540708	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	33.3	■■■□□ 2.92
ARL6IP4-218	ENST00000540708	XRN1	Q8IZH2	1706 aa	Known RBP	33.29	■■■□□ 2.92
ARL6IP4-218	ENST00000540708	NUDT16	Q96DE0	195 aa	Known RBP	33.27	■■■□□ 2.92
ARL6IP4-218	ENST00000540708	PPIP5K1	Q6PFW1	1433 aa		33.26	■■■□□ 2.91
ARL6IP4-218	ENST00000540708	CCDC61	Q9Y6R9	512 aa		33.24	■■■□□ 2.91
ARL6IP4-218	ENST00000540708	WDR43	Q15061	677 aa	Known RBP eCLIP	33.24	■■■□□ 2.91
ARL6IP4-218	ENST00000540708	BLM	P54132	1417 aa	Predicted RBP	33.22	■■■□□ 2.91
ARL6IP4-218	ENST00000540708	POLR3A	O14802	1390 aa	Predicted RBP	33.2	■■■□□ 2.9
ARL6IP4-218	ENST00000540708	CPSF1	Q10570	1443 aa	Known RBP	33.2	■■■□□ 2.9
ARL6IP4-218	ENST00000540708	CDC42BPG	Q6DT37	1551 aa		33.19	■■■□□ 2.9
ARL6IP4-218	ENST00000540708	ANKRD26	Q9UPS8	1709 aa		33.18	■■■□□ 2.9
ARL6IP4-218	ENST00000540708	NPHP4	O75161	1426 aa	Predicted RBP	33.18	■■■□□ 2.9
ARL6IP4-218	ENST00000540708	TNNT2	P45379	298 aa	Predicted RBP	33.18	■■■□□ 2.9
ARL6IP4-218	ENST00000540708	FYB1	O15117	783 aa		33.17	■■■□□ 2.9
ARL6IP4-218	ENST00000540708	KCNA6	P17658	529 aa		33.17	■■■□□ 2.9
ARL6IP4-218	ENST00000540708	ADAMTS8	Q9UP79	889 aa		33.17	■■■□□ 2.9
ARL6IP4-218	ENST00000540708	PRR36	Q9H6K5	1346 aa		33.17	■■■□□ 2.9
ARL6IP4-218	ENST00000540708	CHD2	O14647	1828 aa	Known RBP	33.15	■■■□□ 2.9
ARL6IP4-218	ENST00000540708	GGNBP2	Q9H3C7	697 aa		33.15	■■■□□ 2.9
ARL6IP4-218	ENST00000540708	KIF20B	Q96Q89	1820 aa		33.15	■■■□□ 2.9
ARL6IP4-218	ENST00000540708	EDC4	Q6P2E9	1401 aa	Known RBP	33.14	■■■□□ 2.9
ARL6IP4-218	ENST00000540708	TOPAZ1	Q8N9V7	1692 aa		33.12	■■■□□ 2.89
ARL6IP4-218	ENST00000540708	NCKAP5L	Q9HCH0	1330 aa		33.12	■■■□□ 2.89
ARL6IP4-218	ENST00000540708	ITSN1	Q15811	1721 aa		33.11	■■■□□ 2.89
ARL6IP4-218	ENST00000540708	ZNF692	Q9BU19	519 aa	Predicted RBP	33.11	■■■□□ 2.89
ARL6IP4-218	ENST00000540708	AKAP12	Q02952	1782 aa		33.09	■■■□□ 2.89
ARL6IP4-218	ENST00000540708	MTHFS	P49914	203 aa		33.09	■■■□□ 2.89
ARL6IP4-218	ENST00000540708	MON2	Q7Z3U7	1717 aa		33.09	■■■□□ 2.89
ARL6IP4-218	ENST00000540708	CFAP53	Q96M91	514 aa		33.09	■■■□□ 2.89
ARL6IP4-218	ENST00000540708	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.08	■■■□□ 2.89
ARL6IP4-218	ENST00000540708	PLEKHG3	A1L390	1219 aa		33.07	■■■□□ 2.88
ARL6IP4-218	ENST00000540708	SENP3-EIF4A1	A0A087X0R7	540 aa		33.06	■■■□□ 2.88
ARL6IP4-218	ENST00000540708	SMG6	Q86US8	1419 aa	Known RBP	33.06	■■■□□ 2.88
ARL6IP4-218	ENST00000540708	NUTM2F	A1L443	756 aa		33.03	■■■□□ 2.88
ARL6IP4-218	ENST00000540708	SHPRH	Q149N8	1683 aa		33	■■■□□ 2.87
ARL6IP4-218	ENST00000540708	ANKAR	Q7Z5J8	1434 aa		33	■■■□□ 2.87
ARL6IP4-218	ENST00000540708	NUDC	Q9Y266	331 aa		33	■■■□□ 2.87
ARL6IP4-218	ENST00000540708	ACE	P12821	1306 aa		33	■■■□□ 2.87
ARL6IP4-218	ENST00000540708	NEFL	P07196	543 aa		32.99	■■■□□ 2.87
ARL6IP4-218	ENST00000540708	PDE3B	Q13370	1112 aa		32.99	■■■□□ 2.87
ARL6IP4-218	ENST00000540708	SALL2	Q9Y467	1007 aa	Predicted RBP	32.98	■■■□□ 2.87
ARL6IP4-218	ENST00000540708	NKTR	P30414	1462 aa	Known RBP	32.98	■■■□□ 2.87
ARL6IP4-218	ENST00000540708	FMN2	Q9NZ56	1722 aa		32.97	■■■□□ 2.87
ARL6IP4-218	ENST00000540708	SUPT16H	Q9Y5B9	1047 aa	Known RBP	32.96	■■■□□ 2.87
ARL6IP4-218	ENST00000540708	NME9	Q86XW9	330 aa		32.96	■■■□□ 2.87
ARL6IP4-218	ENST00000540708	NWD1	Q149M9	1564 aa		32.94	■■■□□ 2.86
ARL6IP4-218	ENST00000540708	NALCN	Q8IZF0	1738 aa		32.94	■■■□□ 2.86
ARL6IP4-218	ENST00000540708	NRK	Q7Z2Y5	1582 aa		32.94	■■■□□ 2.86
ARL6IP4-218	ENST00000540708	USP6	P35125	1406 aa		32.93	■■■□□ 2.86
ARL6IP4-218	ENST00000540708	KDM4F	A0A1W2PPD8	638 aa		32.91	■■■□□ 2.86

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms