RNA–Protein interactions for RNA: ENST00000540249.5

PDHA1-212, Transcript of pyruvate dehydrogenase E1 alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene PDHA1, Length 3,277 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1-212ENST00000540249 SYNMO15061 1565 aa17.2■□□□□ 0.34
PDHA1-212ENST00000540249 LAMC1P11047 1609 aa17.2■□□□□ 0.34
PDHA1-212ENST00000540249 ZKSCAN2Q63HK3 967 aa17.2■□□□□ 0.34
PDHA1-212ENST00000540249 GGNBP2Q9H3C7 697 aa17.19■□□□□ 0.34
PDHA1-212ENST00000540249 ANTXR1Q9H6X2 564 aa17.19■□□□□ 0.34
PDHA1-212ENST00000540249 GOLGA6L3A6NEY3 463 aa17.19■□□□□ 0.34
PDHA1-212ENST00000540249 MVPQ14764 893 aaKnown RBP17.18■□□□□ 0.34
PDHA1-212ENST00000540249 MYH16Q9H6N6 1097 aa17.18■□□□□ 0.34
PDHA1-212ENST00000540249 PLCH2O75038 1416 aa17.18■□□□□ 0.34
PDHA1-212ENST00000540249 LNPKQ9C0E8 428 aa17.18■□□□□ 0.34
PDHA1-212ENST00000540249 NAP1L5Q96NT1 182 aaPredicted RBP17.17■□□□□ 0.34
PDHA1-212ENST00000540249 XRCC6P12956 609 aaKnown RBP eCLIP17.17■□□□□ 0.34
PDHA1-212ENST00000540249 ABCC2Q92887 1545 aa17.16■□□□□ 0.34
PDHA1-212ENST00000540249 MCM4P33991 863 aa17.16■□□□□ 0.34
PDHA1-212ENST00000540249 L1TD1Q5T7N2 865 aaKnown RBP17.16■□□□□ 0.34
PDHA1-212ENST00000540249 CFAP65Q6ZU64 1925 aaKnown RBP17.16■□□□□ 0.34
PDHA1-212ENST00000540249 CLTCL1P53675 1640 aa17.16■□□□□ 0.34
PDHA1-212ENST00000540249 SSH1Q8WYL5 1049 aa17.16■□□□□ 0.34
PDHA1-212ENST00000540249 RNF17Q9BXT8 1623 aaKnown RBP17.15■□□□□ 0.34
PDHA1-212ENST00000540249 NPC1L1Q9UHC9 1359 aa17.15■□□□□ 0.34
PDHA1-212ENST00000540249 TRIM27P14373 513 aa17.15■□□□□ 0.34
PDHA1-212ENST00000540249 NOB1Q9ULX3 412 aaKnown RBP17.15■□□□□ 0.34
PDHA1-212ENST00000540249 ELL2O00472 640 aaPredicted RBP17.15■□□□□ 0.34
PDHA1-212ENST00000540249 FBLN1P23142 703 aa17.15■□□□□ 0.34
PDHA1-212ENST00000540249 POLR3AO14802 1390 aaPredicted RBP17.15■□□□□ 0.34
PDHA1-212ENST00000540249 HSP90AA1P07900 732 aaKnown RBP17.15■□□□□ 0.34
PDHA1-212ENST00000540249 SRPK2P78362 688 aaKnown RBP17.15■□□□□ 0.34
PDHA1-212ENST00000540249 NOS1P29475 1434 aa17.14■□□□□ 0.34
PDHA1-212ENST00000540249 IQGAP1P46940 1657 aa17.14■□□□□ 0.33
PDHA1-212ENST00000540249 TRAK2O60296 914 aa17.14■□□□□ 0.33
PDHA1-212ENST00000540249 WDR63Q8IWG1 891 aa17.14■□□□□ 0.33
PDHA1-212ENST00000540249 HSCBQ8IWL3 235 aa17.14■□□□□ 0.33
PDHA1-212ENST00000540249 C1orf115Q9H7X2 142 aa17.14■□□□□ 0.33
PDHA1-212ENST00000540249 KDM5AP29375 1690 aaKnown RBP17.13■□□□□ 0.33
PDHA1-212ENST00000540249 TMEM57Q8N5G2 664 aa17.13■□□□□ 0.33
PDHA1-212ENST00000540249 PLXNC1O60486 1568 aa17.12■□□□□ 0.33
PDHA1-212ENST00000540249 NGEFQ8N5V2 710 aa17.12■□□□□ 0.33
PDHA1-212ENST00000540249 RSPH6AQ9H0K4 717 aa17.12■□□□□ 0.33
PDHA1-212ENST00000540249 MYOM1P52179 1685 aa17.12■□□□□ 0.33
PDHA1-212ENST00000540249 CLASP1Q7Z460 1538 aa17.11■□□□□ 0.33
PDHA1-212ENST00000540249 NLRP1Q9C000 1473 aa17.11■□□□□ 0.33
PDHA1-212ENST00000540249 STAC3Q96MF2 364 aa17.1■□□□□ 0.33
PDHA1-212ENST00000540249 CHMP5Q9NZZ3 219 aa17.1■□□□□ 0.33
PDHA1-212ENST00000540249 RIPK4P57078 832 aa17.1■□□□□ 0.33
PDHA1-212ENST00000540249 NINLQ9Y2I6 1382 aa17.1■□□□□ 0.33
PDHA1-212ENST00000540249 TRPM2O94759 1503 aa17.09■□□□□ 0.33
PDHA1-212ENST00000540249 HSP90AB1P08238 724 aaKnown RBP17.09■□□□□ 0.33
PDHA1-212ENST00000540249 PTPRTO14522 1441 aa17.09■□□□□ 0.33
PDHA1-212ENST00000540249 SLC24A1O60721 1099 aa17.09■□□□□ 0.33
PDHA1-212ENST00000540249 THUMPD2Q9BTF0 503 aaKnown RBP17.08■□□□□ 0.33
PDHA1-212ENST00000540249 TMPOP42166 694 aaKnown RBP17.08■□□□□ 0.32
PDHA1-212ENST00000540249 ATF7IPQ6VMQ6 1270 aa17.08■□□□□ 0.32
PDHA1-212ENST00000540249 MINK1Q8N4C8 1332 aaPredicted RBP17.08■□□□□ 0.32
PDHA1-212ENST00000540249 ANKRD45Q5TZF3 282 aa17.07■□□□□ 0.32
PDHA1-212ENST00000540249 PNNQ9H307 717 aaKnown RBP17.06■□□□□ 0.32
PDHA1-212ENST00000540249 DDX19BQ9UMR2 479 aa17.06■□□□□ 0.32
PDHA1-212ENST00000540249 SPHKAPQ2M3C7 1700 aa17.06■□□□□ 0.32
PDHA1-212ENST00000540249 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
PDHA1-212ENST00000540249 CEP152O94986 1710 aa17.05■□□□□ 0.32
PDHA1-212ENST00000540249 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.05■□□□□ 0.32
PDHA1-212ENST00000540249 ABCC1P33527 1531 aa17.05■□□□□ 0.32
PDHA1-212ENST00000540249 HMOX1P09601 288 aa17.04■□□□□ 0.32
PDHA1-212ENST00000540249 TRIM35Q9UPQ4 493 aa17.04■□□□□ 0.32
PDHA1-212ENST00000540249 EVC2Q86UK5 1308 aa17.03■□□□□ 0.32
PDHA1-212ENST00000540249 APBB1O00213 710 aa17.03■□□□□ 0.32
PDHA1-212ENST00000540249 PHF23Q9BUL5 403 aaPredicted RBP17.03■□□□□ 0.32
PDHA1-212ENST00000540249 C14orf93Q9H972 538 aaKnown RBP17.03■□□□□ 0.32
PDHA1-212ENST00000540249 ABCA6Q8N139 1617 aa17.02■□□□□ 0.32
PDHA1-212ENST00000540249 TNPO1Q92973 898 aaKnown RBP17.01■□□□□ 0.31
PDHA1-212ENST00000540249 FANCAO15360 1455 aa17.01■□□□□ 0.31
PDHA1-212ENST00000540249 CHD1O14646 1710 aa17.01■□□□□ 0.31
PDHA1-212ENST00000540249 CD2BP2O95400 341 aaKnown RBP17■□□□□ 0.31
PDHA1-212ENST00000540249 GRPEL1Q9HAV7 217 aa17■□□□□ 0.31
PDHA1-212ENST00000540249 NCLP19338 710 aaKnown RBP17■□□□□ 0.31
PDHA1-212ENST00000540249 ZFYVE16Q7Z3T8 1539 aa16.99■□□□□ 0.31
PDHA1-212ENST00000540249 CCDC27Q2M243 656 aa16.99■□□□□ 0.31
PDHA1-212ENST00000540249 AAMPQ13685 434 aa16.99■□□□□ 0.31
PDHA1-212ENST00000540249 TRIM44Q96DX7 344 aaPredicted RBP16.99■□□□□ 0.31
PDHA1-212ENST00000540249 CHD1LQ86WJ1 897 aa16.98■□□□□ 0.31
PDHA1-212ENST00000540249 ADGRL1O94910 1474 aa16.98■□□□□ 0.31
PDHA1-212ENST00000540249 ZNF518AQ6AHZ1 1483 aa16.98■□□□□ 0.31
PDHA1-212ENST00000540249 MAP3K4Q9Y6R4 1608 aa16.98■□□□□ 0.31
PDHA1-212ENST00000540249 ZBTB40Q9NUA8 1239 aa16.98■□□□□ 0.31
PDHA1-212ENST00000540249 HDAC1Q13547 482 aaPredicted RBP16.97■□□□□ 0.31
PDHA1-212ENST00000540249 FSD2A1L4K1 749 aa16.97■□□□□ 0.31
PDHA1-212ENST00000540249 IPO8O15397 1037 aaKnown RBP16.97■□□□□ 0.31
PDHA1-212ENST00000540249 DIAPH1O60610 1272 aaKnown RBP16.97■□□□□ 0.31
PDHA1-212ENST00000540249 GAS2L3Q86XJ1 694 aa16.97■□□□□ 0.31
PDHA1-212ENST00000540249 UBE2Q2Q8WVN8 375 aa16.97■□□□□ 0.31
PDHA1-212ENST00000540249 PRKAR2BP31323 418 aa16.97■□□□□ 0.31
PDHA1-212ENST00000540249 MRE11P49959 708 aa16.97■□□□□ 0.31
PDHA1-212ENST00000540249 ZCCHC11Q5TAX3 1644 aaKnown RBP16.97■□□□□ 0.31
PDHA1-212ENST00000540249 SMC5Q8IY18 1101 aa16.96■□□□□ 0.31
PDHA1-212ENST00000540249 ATP7AQ04656 1500 aa16.96■□□□□ 0.31
PDHA1-212ENST00000540249 DDX11L8A8MPP1 907 aa16.96■□□□□ 0.31
PDHA1-212ENST00000540249 TSPYL6Q8N831 410 aa16.95■□□□□ 0.3
PDHA1-212ENST00000540249 PLEKHF1Q96S99 279 aa16.95■□□□□ 0.3
PDHA1-212ENST00000540249 IQSEC2Q5JU85 1478 aa16.95■□□□□ 0.3
PDHA1-212ENST00000540249 FYB1O15117 783 aa16.95■□□□□ 0.3
PDHA1-212ENST00000540249 RTEL1-TNFRSF6BF6WH68 1400 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms