RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 SLC52A1Q9NWF4 448 aa7.77□□□□□ -1.17
PTPRD-214ENST00000540109 PPLO60437 1756 aa7.76□□□□□ -1.17
PTPRD-214ENST00000540109 GSE1Q14687 1217 aa7.76□□□□□ -1.17
PTPRD-214ENST00000540109 NPATQ14207 1427 aa7.76□□□□□ -1.17
PTPRD-214ENST00000540109 NINLQ9Y2I6 1382 aa7.76□□□□□ -1.17
PTPRD-214ENST00000540109 DIP2BQ9P265 1576 aa7.76□□□□□ -1.17
PTPRD-214ENST00000540109 TULP1O00294 542 aaPredicted RBP7.75□□□□□ -1.17
PTPRD-214ENST00000540109 ASXL1Q8IXJ9 1541 aa7.75□□□□□ -1.17
PTPRD-214ENST00000540109 GZF1Q9H116 711 aaPredicted RBP7.75□□□□□ -1.17
PTPRD-214ENST00000540109 KNSTRNQ9Y448 316 aa7.75□□□□□ -1.17
PTPRD-214ENST00000540109 PIK3C2GO75747 1445 aa7.75□□□□□ -1.17
PTPRD-214ENST00000540109 UGGT1Q9NYU2 1555 aa7.75□□□□□ -1.17
PTPRD-214ENST00000540109 VGFO15240 615 aaPredicted RBP7.75□□□□□ -1.17
PTPRD-214ENST00000540109 PNISRQ8TF01 805 aaKnown RBP7.75□□□□□ -1.17
PTPRD-214ENST00000540109 RIMBP3CA6NJZ7 1639 aa7.75□□□□□ -1.17
PTPRD-214ENST00000540109 RIMBP3BA6NNM3 1639 aa7.75□□□□□ -1.17
PTPRD-214ENST00000540109 RIMBP3Q9UFD9 1639 aa7.75□□□□□ -1.17
PTPRD-214ENST00000540109 PATL2C9JE40 543 aaKnown RBP7.74□□□□□ -1.17
PTPRD-214ENST00000540109 NUDCQ9Y266 331 aa7.74□□□□□ -1.17
PTPRD-214ENST00000540109 KLHL34Q8N239 644 aa7.74□□□□□ -1.17
PTPRD-214ENST00000540109 DISP3Q9P2K9 1392 aa7.74□□□□□ -1.17
PTPRD-214ENST00000540109 NBPF1Q3BBV0 1214 aa7.74□□□□□ -1.17
PTPRD-214ENST00000540109 USP32Q8NFA0 1604 aa7.73□□□□□ -1.17
PTPRD-214ENST00000540109 MROH2AA6NES4 1674 aa7.73□□□□□ -1.17
PTPRD-214ENST00000540109 BLMP54132 1417 aaPredicted RBP7.73□□□□□ -1.17
PTPRD-214ENST00000540109 NSD2O96028 1365 aa7.73□□□□□ -1.17
PTPRD-214ENST00000540109 PER1O15534 1290 aaPredicted RBP7.72□□□□□ -1.17
PTPRD-214ENST00000540109 C14orf93Q9H972 538 aaKnown RBP7.72□□□□□ -1.17
PTPRD-214ENST00000540109 DHX37Q8IY37 1157 aaKnown RBP7.72□□□□□ -1.17
PTPRD-214ENST00000540109 CENPJQ9HC77 1338 aaPredicted RBP7.71□□□□□ -1.17
PTPRD-214ENST00000540109 FAM13BQ9NYF5 915 aa7.71□□□□□ -1.18
PTPRD-214ENST00000540109 PREX1Q8TCU6 1659 aa7.71□□□□□ -1.18
PTPRD-214ENST00000540109 ARHGEF40Q8TER5 1519 aa7.71□□□□□ -1.18
PTPRD-214ENST00000540109 NEXMIFQ5QGS0 1516 aa7.7□□□□□ -1.18
PTPRD-214ENST00000540109 PANK3Q9H999 370 aa7.7□□□□□ -1.18
PTPRD-214ENST00000540109 MYOM1P52179 1685 aa7.7□□□□□ -1.18
PTPRD-214ENST00000540109 ADGRB1O14514 1584 aa7.7□□□□□ -1.18
PTPRD-214ENST00000540109 SPRYD3Q8NCJ5 442 aa7.7□□□□□ -1.18
PTPRD-214ENST00000540109 ERVK-7P63135 1459 aa7.7□□□□□ -1.18
PTPRD-214ENST00000540109 RNF123Q5XPI4 1314 aa7.7□□□□□ -1.18
PTPRD-214ENST00000540109 GOLGA6L3A6NEY3 463 aa7.69□□□□□ -1.18
PTPRD-214ENST00000540109 RBM10P98175 930 aaKnown RBP7.69□□□□□ -1.18
PTPRD-214ENST00000540109 NCBP3Q53F19 620 aaKnown RBP7.69□□□□□ -1.18
PTPRD-214ENST00000540109 GGT6Q6P531 493 aa7.69□□□□□ -1.18
PTPRD-214ENST00000540109 ISY1Q9ULR0 285 aaKnown RBP7.69□□□□□ -1.18
PTPRD-214ENST00000540109 CALRP27797 417 aaKnown RBP7.68□□□□□ -1.18
PTPRD-214ENST00000540109 QRICH2Q9H0J4 1663 aa7.68□□□□□ -1.18
PTPRD-214ENST00000540109 HDGFP51858 240 aaKnown RBP7.68□□□□□ -1.18
PTPRD-214ENST00000540109 WDR43Q15061 677 aaKnown RBP eCLIP7.68□□□□□ -1.18
PTPRD-214ENST00000540109 TPRNQ4KMQ1 711 aa7.68□□□□□ -1.18
PTPRD-214ENST00000540109 TCERG1O14776 1098 aaKnown RBP7.68□□□□□ -1.18
PTPRD-214ENST00000540109 EVC2Q86UK5 1308 aa7.68□□□□□ -1.18
PTPRD-214ENST00000540109 DLC1Q96QB1 1528 aa7.68□□□□□ -1.18
PTPRD-214ENST00000540109 SPATA31D1Q6ZQQ2 1576 aa7.68□□□□□ -1.18
PTPRD-214ENST00000540109 CHAF1AQ13111 956 aaPredicted RBP7.68□□□□□ -1.18
PTPRD-214ENST00000540109 PLCD3Q8N3E9 789 aa7.67□□□□□ -1.18
PTPRD-214ENST00000540109 CHMP4BQ9H444 224 aaKnown RBP7.67□□□□□ -1.18
PTPRD-214ENST00000540109 CGNL1Q0VF96 1302 aa7.67□□□□□ -1.18
PTPRD-214ENST00000540109 ADGRF5Q8IZF2 1346 aa7.67□□□□□ -1.18
PTPRD-214ENST00000540109 ZNF771Q7L3S4 317 aaPredicted RBP7.67□□□□□ -1.18
PTPRD-214ENST00000540109 MSH5O43196 834 aa7.67□□□□□ -1.18
PTPRD-214ENST00000540109 RGS3P49796 1198 aa7.67□□□□□ -1.18
PTPRD-214ENST00000540109 PLCB2Q00722 1185 aa7.67□□□□□ -1.18
PTPRD-214ENST00000540109 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.67□□□□□ -1.18
PTPRD-214ENST00000540109 TMEM131LA2VDJ0 1609 aa7.67□□□□□ -1.18
PTPRD-214ENST00000540109 ATAD2Q6PL18 1390 aa7.67□□□□□ -1.18
PTPRD-214ENST00000540109 CCDC184Q52MB2 194 aa7.66□□□□□ -1.18
PTPRD-214ENST00000540109 NRDCO43847 1150 aa7.66□□□□□ -1.18
PTPRD-214ENST00000540109 FAM69CQ0P6D2 419 aa7.66□□□□□ -1.18
PTPRD-214ENST00000540109 BBXQ8WY36 941 aaPredicted RBP7.66□□□□□ -1.18
PTPRD-214ENST00000540109 TAF7LQ5H9L4 462 aa7.66□□□□□ -1.18
PTPRD-214ENST00000540109 CFAP70Q5T0N1 1121 aa7.66□□□□□ -1.18
PTPRD-214ENST00000540109 TAF3Q5VWG9 929 aa7.66□□□□□ -1.18
PTPRD-214ENST00000540109 SLC4A3P48751 1232 aa7.66□□□□□ -1.18
PTPRD-214ENST00000540109 POLR3AO14802 1390 aaPredicted RBP7.66□□□□□ -1.18
PTPRD-214ENST00000540109 SIGLEC1Q9BZZ2 1709 aa7.65□□□□□ -1.18
PTPRD-214ENST00000540109 SLKQ9H2G2 1235 aaPredicted RBP7.65□□□□□ -1.18
PTPRD-214ENST00000540109 YEATS2Q9ULM3 1422 aa7.65□□□□□ -1.18
PTPRD-214ENST00000540109 ARHGEF28Q8N1W1 1705 aaKnown RBP7.65□□□□□ -1.18
PTPRD-214ENST00000540109 CHGAP10645 457 aaKnown RBP7.65□□□□□ -1.18
PTPRD-214ENST00000540109 CLTCQ00610 1675 aaKnown RBP7.65□□□□□ -1.18
PTPRD-214ENST00000540109 PPP2R1AP30153 589 aa7.65□□□□□ -1.18
PTPRD-214ENST00000540109 AEBP1Q8IUX7 1158 aa7.65□□□□□ -1.18
PTPRD-214ENST00000540109 MED14O60244 1454 aa7.65□□□□□ -1.19
PTPRD-214ENST00000540109 RAPGEF3O95398 923 aa7.65□□□□□ -1.19
PTPRD-214ENST00000540109 CFAP53Q96M91 514 aa7.64□□□□□ -1.19
PTPRD-214ENST00000540109 CYB5RLQ6IPT4 315 aa7.64□□□□□ -1.19
PTPRD-214ENST00000540109 PLPPR3Q6T4P5 718 aa7.64□□□□□ -1.19
PTPRD-214ENST00000540109 ANKRD36BQ8N2N9 1353 aa7.64□□□□□ -1.19
PTPRD-214ENST00000540109 MS4A1P11836 297 aa7.64□□□□□ -1.19
PTPRD-214ENST00000540109 RRP9O43818 475 aaKnown RBP7.64□□□□□ -1.19
PTPRD-214ENST00000540109 PAK3O75914 559 aaPredicted RBP7.63□□□□□ -1.19
PTPRD-214ENST00000540109 FRAT1Q92837 279 aaPredicted RBP7.63□□□□□ -1.19
PTPRD-214ENST00000540109 ESF1Q9H501 851 aaKnown RBP7.63□□□□□ -1.19
PTPRD-214ENST00000540109 CC2D1BQ5T0F9 858 aaKnown RBP7.63□□□□□ -1.19
PTPRD-214ENST00000540109 FAM43AQ8N2R8 423 aa7.63□□□□□ -1.19
PTPRD-214ENST00000540109 SIRT1Q96EB6 747 aa7.63□□□□□ -1.19
PTPRD-214ENST00000540109 MYH16Q9H6N6 1097 aa7.62□□□□□ -1.19
PTPRD-214ENST00000540109 TERF2IPQ9NYB0 399 aa7.62□□□□□ -1.19
PTPRD-214ENST00000540109 GOLGA6L6A8MZA4 724 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms