RNA–Protein interactions for RNA: ENST00000539743.5

CPT1A-205, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CPT1A, Length 2,382 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-205ENST00000539743 BCAR3O75815 825 aa15.71■□□□□ 0.11
CPT1A-205ENST00000539743 TRPM1Q7Z4N2 1603 aa15.7■□□□□ 0.1
CPT1A-205ENST00000539743 UQCRHLA0A096LP55 91 aa15.7■□□□□ 0.1
CPT1A-205ENST00000539743 UQCRHP07919 91 aa15.7■□□□□ 0.1
CPT1A-205ENST00000539743 AMER1Q5JTC6 1135 aaPredicted RBP15.7■□□□□ 0.1
CPT1A-205ENST00000539743 DUOX2Q9NRD8 1548 aa15.69■□□□□ 0.1
CPT1A-205ENST00000539743 E9PSI1 815 aa15.69■□□□□ 0.1
CPT1A-205ENST00000539743 CSPP1Q1MSJ5 1256 aa15.69■□□□□ 0.1
CPT1A-205ENST00000539743 DNAJC5Q9H3Z4 198 aa15.69■□□□□ 0.1
CPT1A-205ENST00000539743 LAMC1P11047 1609 aa15.68■□□□□ 0.1
CPT1A-205ENST00000539743 EFCAB2Q5VUJ9 269 aa15.68■□□□□ 0.1
CPT1A-205ENST00000539743 TNPO1Q92973 898 aaKnown RBP15.68■□□□□ 0.1
CPT1A-205ENST00000539743 PANK3Q9H999 370 aa15.68■□□□□ 0.1
CPT1A-205ENST00000539743 ERBINQ96RT1 1412 aa15.68■□□□□ 0.1
CPT1A-205ENST00000539743 NOL7Q9UMY1 257 aaKnown RBP15.68■□□□□ 0.1
CPT1A-205ENST00000539743 IQGAP3Q86VI3 1631 aa15.67■□□□□ 0.1
CPT1A-205ENST00000539743 ABCC1P33527 1531 aa15.67■□□□□ 0.1
CPT1A-205ENST00000539743 MAGI2Q86UL8 1455 aa15.67■□□□□ 0.1
CPT1A-205ENST00000539743 CCDC94Q9BW85 323 aaPredicted RBP15.67■□□□□ 0.1
CPT1A-205ENST00000539743 ZHX1Q9UKY1 873 aaPredicted RBP15.67■□□□□ 0.1
CPT1A-205ENST00000539743 KDM2AQ9Y2K7 1162 aa15.67■□□□□ 0.1
CPT1A-205ENST00000539743 TNNT2P45379 298 aaPredicted RBP15.66■□□□□ 0.1
CPT1A-205ENST00000539743 SMC5Q8IY18 1101 aa15.66■□□□□ 0.1
CPT1A-205ENST00000539743 NGEFQ8N5V2 710 aa15.66■□□□□ 0.1
CPT1A-205ENST00000539743 PDZRN3Q9UPQ7 1066 aa15.66■□□□□ 0.1
CPT1A-205ENST00000539743 RAB3GAP1Q15042 981 aa15.65■□□□□ 0.1
CPT1A-205ENST00000539743 SNX21Q969T3 373 aa15.65■□□□□ 0.1
CPT1A-205ENST00000539743 ARAP3Q8WWN8 1544 aa15.65■□□□□ 0.1
CPT1A-205ENST00000539743 COG6Q9Y2V7 657 aa15.65■□□□□ 0.1
CPT1A-205ENST00000539743 PLA2R1Q13018 1463 aa15.65■□□□□ 0.1
CPT1A-205ENST00000539743 MCM5P33992 734 aa15.64■□□□□ 0.09
CPT1A-205ENST00000539743 GPRASP1Q5JY77 1395 aa15.64■□□□□ 0.09
CPT1A-205ENST00000539743 KCNA4P22459 653 aa15.64■□□□□ 0.09
CPT1A-205ENST00000539743 CANXP27824 592 aaKnown RBP15.64■□□□□ 0.09
CPT1A-205ENST00000539743 PPP2R1AP30153 589 aa15.64■□□□□ 0.09
CPT1A-205ENST00000539743 KIF20AO95235 890 aa15.63■□□□□ 0.09
CPT1A-205ENST00000539743 ZSCAN20P17040 1043 aaPredicted RBP15.63■□□□□ 0.09
CPT1A-205ENST00000539743 SASS6Q6UVJ0 657 aa15.63■□□□□ 0.09
CPT1A-205ENST00000539743 RWDD1Q9H446 243 aaPredicted RBP15.63■□□□□ 0.09
CPT1A-205ENST00000539743 DISP3Q9P2K9 1392 aa15.63■□□□□ 0.09
CPT1A-205ENST00000539743 PRAG1Q86YV5 1406 aa15.63■□□□□ 0.09
CPT1A-205ENST00000539743 PANK1Q8TE04 598 aa15.62■□□□□ 0.09
CPT1A-205ENST00000539743 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.62■□□□□ 0.093e-6■■□□□ 14
CPT1A-205ENST00000539743 GTPBP4Q9BZE4 634 aaKnown RBP15.62■□□□□ 0.09
CPT1A-205ENST00000539743 TRAPPC8Q9Y2L5 1435 aa15.62■□□□□ 0.09
CPT1A-205ENST00000539743 ATP10AO60312 1499 aa15.62■□□□□ 0.09
CPT1A-205ENST00000539743 PRDM15P57071 1507 aaPredicted RBP15.62■□□□□ 0.09
CPT1A-205ENST00000539743 GOLGA6L22H0YM25 854 aa15.62■□□□□ 0.09
CPT1A-205ENST00000539743 SPINK5Q9NQ38 1064 aaPredicted RBP15.62■□□□□ 0.09
CPT1A-205ENST00000539743 PIK3C2GO75747 1445 aa15.62■□□□□ 0.09
CPT1A-205ENST00000539743 MFAP1P55081 439 aaKnown RBP15.61■□□□□ 0.09
CPT1A-205ENST00000539743 KLHL40Q2TBA0 621 aa15.61■□□□□ 0.09
CPT1A-205ENST00000539743 BBXQ8WY36 941 aaPredicted RBP15.61■□□□□ 0.09
CPT1A-205ENST00000539743 PDLIM2Q96JY6 352 aa15.61■□□□□ 0.09
CPT1A-205ENST00000539743 TESK2Q96S53 571 aa15.61■□□□□ 0.09
CPT1A-205ENST00000539743 PRDM10Q9NQV6 1147 aa15.61■□□□□ 0.09
CPT1A-205ENST00000539743 ZNF445P59923 1031 aa15.6■□□□□ 0.09
CPT1A-205ENST00000539743 CLEC17AQ6ZS10 378 aa15.6■□□□□ 0.09
CPT1A-205ENST00000539743 ZKSCAN5Q9Y2L8 839 aa15.6■□□□□ 0.09
CPT1A-205ENST00000539743 PCDHB15Q9Y5E8 787 aa15.6■□□□□ 0.09
CPT1A-205ENST00000539743 WDR7Q9Y4E6 1490 aa15.59■□□□□ 0.09
CPT1A-205ENST00000539743 TMF1P82094 1093 aa15.59■□□□□ 0.09
CPT1A-205ENST00000539743 RBM25P49756 843 aaKnown RBP15.58■□□□□ 0.09
CPT1A-205ENST00000539743 XPCQ01831 940 aaPredicted RBP15.58■□□□□ 0.09
CPT1A-205ENST00000539743 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.58■□□□□ 0.09
CPT1A-205ENST00000539743 A2MP01023 1474 aa15.58■□□□□ 0.09
CPT1A-205ENST00000539743 ARHGAP31Q2M1Z3 1444 aa15.58■□□□□ 0.08
CPT1A-205ENST00000539743 LETM1O95202 739 aaPredicted RBP15.57■□□□□ 0.08
CPT1A-205ENST00000539743 GTF2E1P29083 439 aaPredicted RBP15.57■□□□□ 0.08
CPT1A-205ENST00000539743 HSP90AB1P08238 724 aaKnown RBP15.57■□□□□ 0.08
CPT1A-205ENST00000539743 ZFYVE16Q7Z3T8 1539 aa15.57■□□□□ 0.08
CPT1A-205ENST00000539743 SPAG9O60271 1321 aaKnown RBP15.56■□□□□ 0.08
CPT1A-205ENST00000539743 PPP4R3BQ5MIZ7 849 aa15.56■□□□□ 0.08
CPT1A-205ENST00000539743 KNSTRNQ9Y448 316 aa15.56■□□□□ 0.08
CPT1A-205ENST00000539743 APAF1O14727 1248 aa15.56■□□□□ 0.08
CPT1A-205ENST00000539743 DDX49Q9Y6V7 483 aaKnown RBP15.55■□□□□ 0.08
CPT1A-205ENST00000539743 STAC3Q96MF2 364 aa15.55■□□□□ 0.08
CPT1A-205ENST00000539743 RGL3Q3MIN7 710 aa15.54■□□□□ 0.08
CPT1A-205ENST00000539743 ABCA9Q8IUA7 1624 aa15.54■□□□□ 0.08
CPT1A-205ENST00000539743 EIF2AK4Q9P2K8 1649 aaKnown RBP15.54■□□□□ 0.08
CPT1A-205ENST00000539743 ARID3AQ99856 593 aa15.54■□□□□ 0.08
CPT1A-205ENST00000539743 TAF3Q5VWG9 929 aa15.53■□□□□ 0.08
CPT1A-205ENST00000539743 CCDC146Q8IYE0 955 aa15.53■□□□□ 0.08
CPT1A-205ENST00000539743 CCDC39Q9UFE4 941 aa15.53■□□□□ 0.08
CPT1A-205ENST00000539743 PDIA4P13667 645 aaKnown RBP15.53■□□□□ 0.08
CPT1A-205ENST00000539743 AFAP1Q8N556 730 aa15.53■□□□□ 0.08
CPT1A-205ENST00000539743 FANCAO15360 1455 aa15.52■□□□□ 0.08
CPT1A-205ENST00000539743 NBPF1Q3BBV0 1214 aa15.52■□□□□ 0.08
CPT1A-205ENST00000539743 NPC1L1Q9UHC9 1359 aa15.52■□□□□ 0.07
CPT1A-205ENST00000539743 MYRIPQ8NFW9 859 aa15.51■□□□□ 0.07
CPT1A-205ENST00000539743 ASXL1Q8IXJ9 1541 aa15.51■□□□□ 0.07
CPT1A-205ENST00000539743 RARSP54136 660 aaKnown RBP15.5■□□□□ 0.07
CPT1A-205ENST00000539743 BCL11BQ9C0K0 894 aaPredicted RBP15.5■□□□□ 0.07
CPT1A-205ENST00000539743 INO80Q9ULG1 1556 aaPredicted RBP15.5■□□□□ 0.07
CPT1A-205ENST00000539743 DEPDC5O75140 1603 aa15.5■□□□□ 0.07
CPT1A-205ENST00000539743 NAP1L2Q9ULW6 460 aaPredicted RBP15.5■□□□□ 0.07
CPT1A-205ENST00000539743 SYNMO15061 1565 aa15.5■□□□□ 0.07
CPT1A-205ENST00000539743 BAG4O95429 457 aaKnown RBP15.49■□□□□ 0.07
CPT1A-205ENST00000539743 ATP7AQ04656 1500 aa15.49■□□□□ 0.07
CPT1A-205ENST00000539743 ZSCAN23Q3MJ62 389 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms