RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 RSPH4AQ5TD94 716 aa6.04□□□□□ -1.44
SNHG1-210ENST00000539303 LAPTM4BQ86VI4 370 aa6.04□□□□□ -1.44
SNHG1-210ENST00000539303 MRPL50Q8N5N7 158 aaKnown RBP6.04□□□□□ -1.44
SNHG1-210ENST00000539303 GJD4Q96KN9 370 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-210ENST00000539303 C6orf229H3BNL8 230 aa6.03□□□□□ -1.44
SNHG1-210ENST00000539303 TK2O00142 265 aa6.03□□□□□ -1.44
SNHG1-210ENST00000539303 ABL2P42684 1182 aa6.03□□□□□ -1.44
SNHG1-210ENST00000539303 MTMR2Q13614 643 aa6.03□□□□□ -1.44
SNHG1-210ENST00000539303 LRRN4Q8WUT4 740 aa6.03□□□□□ -1.44
SNHG1-210ENST00000539303 POM121CA8CG34 1229 aa6.02□□□□□ -1.45
SNHG1-210ENST00000539303 GPR37L1O60883 481 aa6.02□□□□□ -1.45
SNHG1-210ENST00000539303 BCAMP50895 628 aa6.02□□□□□ -1.45
SNHG1-210ENST00000539303 ANKRD13DQ6ZTN6 518 aa6.02□□□□□ -1.45
SNHG1-210ENST00000539303 EPS8L1Q8TE68 723 aa6.02□□□□□ -1.45
SNHG1-210ENST00000539303 LRCH3Q96II8 777 aa6.02□□□□□ -1.45
SNHG1-210ENST00000539303 PER1O15534 1290 aaPredicted RBP6.01□□□□□ -1.45
SNHG1-210ENST00000539303 ATP6V1AP38606 617 aa6.01□□□□□ -1.45
SNHG1-210ENST00000539303 MORN1Q5T089 497 aa6.01□□□□□ -1.45
SNHG1-210ENST00000539303 TRIM34Q9BYJ4 488 aa6.01□□□□□ -1.45
SNHG1-210ENST00000539303 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.01□□□□□ -1.45
SNHG1-210ENST00000539303 SLC27A5Q9Y2P5 690 aa6.01□□□□□ -1.45
SNHG1-210ENST00000539303 ZNF330Q9Y3S2 320 aaPredicted RBP6.01□□□□□ -1.45
SNHG1-210ENST00000539303 SLC4A3P48751 1232 aa6□□□□□ -1.45
SNHG1-210ENST00000539303 APLP1P51693 650 aa6□□□□□ -1.45
SNHG1-210ENST00000539303 IRF5Q13568 498 aa6□□□□□ -1.45
SNHG1-210ENST00000539303 BLOC1S3Q6QNY0 202 aa6□□□□□ -1.45
SNHG1-210ENST00000539303 RNF19BQ6ZMZ0 732 aa6□□□□□ -1.45
SNHG1-210ENST00000539303 PRR7Q8TB68 274 aa6□□□□□ -1.45
SNHG1-210ENST00000539303 ACTN4O43707 911 aaKnown RBP5.99□□□□□ -1.45
SNHG1-210ENST00000539303 KMT5BQ4FZB7 885 aa5.99□□□□□ -1.45
SNHG1-210ENST00000539303 PLSCR2Q9NRY7 297 aa5.99□□□□□ -1.45
SNHG1-210ENST00000539303 HPS5Q9UPZ3 1129 aa5.99□□□□□ -1.45
SNHG1-210ENST00000539303 GRIPAP1Q4V328 841 aa5.98□□□□□ -1.45
SNHG1-210ENST00000539303 SOWAHBA6NEL2 793 aa5.97□□□□□ -1.45
SNHG1-210ENST00000539303 SOCS7O14512 581 aa5.97□□□□□ -1.45
SNHG1-210ENST00000539303 ANKK1Q8NFD2 765 aa5.97□□□□□ -1.45
SNHG1-210ENST00000539303 HELBQ8NG08 1087 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-210ENST00000539303 ADAMTS19Q8TE59 1207 aa5.97□□□□□ -1.45
SNHG1-210ENST00000539303 KRTAP3-3Q9BYR6 98 aa5.97□□□□□ -1.45
SNHG1-210ENST00000539303 KRTAP3-2Q9BYR7 98 aa5.97□□□□□ -1.45
SNHG1-210ENST00000539303 NDUFB9Q9Y6M9 179 aa5.97□□□□□ -1.45
SNHG1-210ENST00000539303 PPP4CP60510 307 aa5.96□□□□□ -1.46
SNHG1-210ENST00000539303 NR6A1Q15406 480 aa5.96□□□□□ -1.46
SNHG1-210ENST00000539303 RETREG3Q86VR2 466 aa5.96□□□□□ -1.46
SNHG1-210ENST00000539303 WNT2BQ93097 391 aa5.96□□□□□ -1.46
SNHG1-210ENST00000539303 GOLGA8CPA6NN73 597 aa5.95□□□□□ -1.46
SNHG1-210ENST00000539303 VAC14Q08AM6 782 aa5.95□□□□□ -1.46
SNHG1-210ENST00000539303 POTEGQ6S5H5 508 aa5.95□□□□□ -1.46
SNHG1-210ENST00000539303 GLMNQ92990 594 aa5.95□□□□□ -1.46
SNHG1-210ENST00000539303 CCDC97Q96F63 343 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-210ENST00000539303 WBP1LQ9NX94 342 aa5.95□□□□□ -1.46
SNHG1-210ENST00000539303 POTEMA6NI47 508 aa5.94□□□□□ -1.46
SNHG1-210ENST00000539303 STAC3Q96MF2 364 aa5.94□□□□□ -1.46
SNHG1-210ENST00000539303 TSR3Q9UJK0 312 aaKnown RBP5.94□□□□□ -1.46
SNHG1-210ENST00000539303 PCDHB3Q9Y5E6 796 aa5.94□□□□□ -1.46
SNHG1-210ENST00000539303 BRICD5Q6PL45 260 aa5.93□□□□□ -1.46
SNHG1-210ENST00000539303 SCUBE3Q8IX30 993 aa5.93□□□□□ -1.46
SNHG1-210ENST00000539303 THAP11Q96EK4 314 aa5.93□□□□□ -1.46
SNHG1-210ENST00000539303 CALR3Q96L12 384 aaKnown RBP5.93□□□□□ -1.46
SNHG1-210ENST00000539303 PRDM9Q9NQV7 894 aa5.93□□□□□ -1.46
SNHG1-210ENST00000539303 COPS2P61201 443 aa5.92□□□□□ -1.46
SNHG1-210ENST00000539303 Q3C1V9 767 aa5.92□□□□□ -1.46
SNHG1-210ENST00000539303 USB1Q9BQ65 265 aaKnown RBP5.92□□□□□ -1.46
SNHG1-210ENST00000539303 PRM3Q9NNZ6 103 aa5.92□□□□□ -1.46
SNHG1-210ENST00000539303 PCDH10Q9P2E7 1040 aa5.92□□□□□ -1.46
SNHG1-210ENST00000539303 SERPINA10Q9UK55 444 aa5.92□□□□□ -1.46
SNHG1-210ENST00000539303 TLL1O43897 1013 aa5.91□□□□□ -1.46
SNHG1-210ENST00000539303 HDGFL1Q5TGJ6 251 aa5.91□□□□□ -1.46
SNHG1-210ENST00000539303 LYPD8Q6UX82 237 aa5.91□□□□□ -1.46
SNHG1-210ENST00000539303 THSD4Q6ZMP0 1018 aa5.91□□□□□ -1.46
SNHG1-210ENST00000539303 CDAN1Q8IWY9 1227 aa5.91□□□□□ -1.46
SNHG1-210ENST00000539303 KCTD12Q96CX2 325 aaKnown RBP5.91□□□□□ -1.46
SNHG1-210ENST00000539303 MAP10Q9P2G4 905 aa5.91□□□□□ -1.46
SNHG1-210ENST00000539303 DESI1Q6ICB0 168 aa5.9□□□□□ -1.46
SNHG1-210ENST00000539303 WWC1Q8IX03 1113 aa5.9□□□□□ -1.46
SNHG1-210ENST00000539303 FAM160A2Q8N612 972 aaPredicted RBP5.9□□□□□ -1.46
SNHG1-210ENST00000539303 NECTIN2Q92692 538 aa5.9□□□□□ -1.46
SNHG1-210ENST00000539303 PRR14Q9BWN1 585 aa5.9□□□□□ -1.46
SNHG1-210ENST00000539303 FMNL1O95466 1100 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-210ENST00000539303 F12P00748 615 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-210ENST00000539303 TRIM26Q12899 539 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-210ENST00000539303 NR1I2O75469 434 aa5.88□□□□□ -1.47
SNHG1-210ENST00000539303 JUNDP17535 347 aa5.88□□□□□ -1.47
SNHG1-210ENST00000539303 UCN2Q96RP3 112 aa5.88□□□□□ -1.47
SNHG1-210ENST00000539303 SALL2Q9Y467 1007 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-210ENST00000539303 RFX1P22670 979 aa5.87□□□□□ -1.47
SNHG1-210ENST00000539303 WASHC4Q2M389 1173 aa5.87□□□□□ -1.47
SNHG1-210ENST00000539303 CFAP70Q5T0N1 1121 aa5.87□□□□□ -1.47
SNHG1-210ENST00000539303 SPSB2Q99619 263 aa5.87□□□□□ -1.47
SNHG1-210ENST00000539303 ALG2Q9H553 416 aa5.87□□□□□ -1.47
SNHG1-210ENST00000539303 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.86□□□□□ -1.47
SNHG1-210ENST00000539303 FBXO45P0C2W1 286 aa5.86□□□□□ -1.47
SNHG1-210ENST00000539303 PTPN5P54829 565 aa5.86□□□□□ -1.47
SNHG1-210ENST00000539303 RETREG2Q8NC44 543 aa5.86□□□□□ -1.47
SNHG1-210ENST00000539303 ZNF516Q92618 1163 aa5.86□□□□□ -1.47
SNHG1-210ENST00000539303 DXOO77932 396 aaKnown RBP5.85□□□□□ -1.47
SNHG1-210ENST00000539303 CTHP32929 405 aa5.85□□□□□ -1.47
SNHG1-210ENST00000539303 PTPRNQ16849 979 aa5.85□□□□□ -1.47
SNHG1-210ENST00000539303 MTRQ99707 1265 aa5.85□□□□□ -1.47
SNHG1-210ENST00000539303 FKBPLQ9UIM3 349 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms