RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 ARMC2Q8NEN0 867 aa1.99□□□□□ -2.09
HIF1A-204ENST00000539097 SYMPKQ92797 1274 aaKnown RBP1.99□□□□□ -2.09
HIF1A-204ENST00000539097 ZDHHC16Q969W1 377 aa1.99□□□□□ -2.09
HIF1A-204ENST00000539097 EYA1Q99502 592 aa1.99□□□□□ -2.09
HIF1A-204ENST00000539097 SEC24BO95487 1268 aa1.99□□□□□ -2.09
HIF1A-204ENST00000539097 PSEN2P49810 448 aa1.99□□□□□ -2.09
HIF1A-204ENST00000539097 CSPP1Q1MSJ5 1256 aa1.99□□□□□ -2.09
HIF1A-204ENST00000539097 C1orf216Q8TAB5 229 aa1.99□□□□□ -2.09
HIF1A-204ENST00000539097 COG6Q9Y2V7 657 aa1.99□□□□□ -2.09
HIF1A-204ENST00000539097 MOXD2PA6NHM9 499 aa1.98□□□□□ -2.09
HIF1A-204ENST00000539097 M0R2N6 131 aa1.98□□□□□ -2.09
HIF1A-204ENST00000539097 SLC10A3P09131 477 aa1.98□□□□□ -2.09
HIF1A-204ENST00000539097 IRF5Q13568 498 aa1.98□□□□□ -2.09
HIF1A-204ENST00000539097 Q3C1V9 767 aa1.98□□□□□ -2.09
HIF1A-204ENST00000539097 RTL5Q5HYW3 569 aaPredicted RBP1.98□□□□□ -2.09
HIF1A-204ENST00000539097 CABLES1Q8TDN4 633 aa1.98□□□□□ -2.09
HIF1A-204ENST00000539097 COL26A1Q96A83 441 aa1.98□□□□□ -2.09
HIF1A-204ENST00000539097 CDCA7LQ96GN5 454 aa1.98□□□□□ -2.09
HIF1A-204ENST00000539097 CDV3Q9UKY7 258 aaKnown RBP1.98□□□□□ -2.09
HIF1A-204ENST00000539097 TBC1D2BQ9UPU7 963 aa1.98□□□□□ -2.09
HIF1A-204ENST00000539097 ZNF454Q8N9F8 522 aa1.98□□□□□ -2.09
HIF1A-204ENST00000539097 GJD4Q96KN9 370 aaPredicted RBP1.98□□□□□ -2.09
HIF1A-204ENST00000539097 GDPD2Q9HCC8 539 aa1.98□□□□□ -2.09
HIF1A-204ENST00000539097 AMOTL2Q9Y2J4 779 aa1.98□□□□□ -2.09
HIF1A-204ENST00000539097 TRAK2O60296 914 aa1.98□□□□□ -2.09
HIF1A-204ENST00000539097 DNAJB2P25686 324 aa1.98□□□□□ -2.09
HIF1A-204ENST00000539097 SCNN1AP37088 669 aa1.98□□□□□ -2.09
HIF1A-204ENST00000539097 PACS2Q86VP3 889 aa1.98□□□□□ -2.09
HIF1A-204ENST00000539097 PLEKHM2Q8IWE5 1019 aa1.98□□□□□ -2.09
HIF1A-204ENST00000539097 TBC1D2Q9BYX2 928 aa1.98□□□□□ -2.09
HIF1A-204ENST00000539097 CD46P15529 392 aa1.97□□□□□ -2.09
HIF1A-204ENST00000539097 TMX1Q9H3N1 280 aa1.97□□□□□ -2.09
HIF1A-204ENST00000539097 C11orf16Q9NQ32 467 aa1.97□□□□□ -2.09
HIF1A-204ENST00000539097 CHIC2Q9UKJ5 165 aa1.97□□□□□ -2.09
HIF1A-204ENST00000539097 RCCD1A6NED2 376 aa1.97□□□□□ -2.09
HIF1A-204ENST00000539097 PER1O15534 1290 aaPredicted RBP1.97□□□□□ -2.09
HIF1A-204ENST00000539097 RFC5P40937 340 aa1.97□□□□□ -2.09
HIF1A-204ENST00000539097 SPIRE2Q8WWL2 714 aa1.97□□□□□ -2.09
HIF1A-204ENST00000539097 SEPT9Q9UHD8 586 aaPredicted RBP1.97□□□□□ -2.09
HIF1A-204ENST00000539097 KRTAP4-8A0A0G2JLE6 195 aa1.97□□□□□ -2.09
HIF1A-204ENST00000539097 BHMG1C9JSJ3 638 aaPredicted RBP1.97□□□□□ -2.09
HIF1A-204ENST00000539097 RBM10P98175 930 aaKnown RBP1.97□□□□□ -2.09
HIF1A-204ENST00000539097 TRIM34Q9BYJ4 488 aa1.97□□□□□ -2.09
HIF1A-204ENST00000539097 EMP3P54852 163 aa1.96□□□□□ -2.1
HIF1A-204ENST00000539097 MSS51Q4VC12 460 aa1.96□□□□□ -2.1
HIF1A-204ENST00000539097 DMRTA1Q5VZB9 504 aa1.96□□□□□ -2.1
HIF1A-204ENST00000539097 NUDT18Q6ZVK8 323 aa1.96□□□□□ -2.1
HIF1A-204ENST00000539097 SLF2Q8IX21 1173 aa1.96□□□□□ -2.1
HIF1A-204ENST00000539097 UCN2Q96RP3 112 aa1.96□□□□□ -2.1
HIF1A-204ENST00000539097 ZNF330Q9Y3S2 320 aaPredicted RBP1.96□□□□□ -2.1
HIF1A-204ENST00000539097 GPC6Q9Y625 555 aaPredicted RBP1.96□□□□□ -2.1
HIF1A-204ENST00000539097 VAMP1P23763 118 aa1.96□□□□□ -2.1
HIF1A-204ENST00000539097 C3orf67Q6ZVT6 689 aa1.96□□□□□ -2.1
HIF1A-204ENST00000539097 GAS2L2Q8NHY3 880 aa1.96□□□□□ -2.1
HIF1A-204ENST00000539097 LRRN4Q8WUT4 740 aa1.96□□□□□ -2.1
HIF1A-204ENST00000539097 MARVELD3Q96A59 401 aa1.96□□□□□ -2.1
HIF1A-204ENST00000539097 TRIM6-TRIM34B2RNG4 842 aa1.96□□□□□ -2.1
HIF1A-204ENST00000539097 LILRB3O75022 631 aa1.96□□□□□ -2.1
HIF1A-204ENST00000539097 SUZ12Q15022 739 aaKnown RBP1.96□□□□□ -2.1
HIF1A-204ENST00000539097 RETREG2Q8NC44 543 aa1.96□□□□□ -2.1
HIF1A-204ENST00000539097 KCNH8Q96L42 1107 aa1.96□□□□□ -2.1
HIF1A-204ENST00000539097 KRTAP4-7Q9BYR0 210 aa1.96□□□□□ -2.1
HIF1A-204ENST00000539097 CFAP99D6REC4 459 aa1.95□□□□□ -2.1
HIF1A-204ENST00000539097 CTDSPL2Q05D32 466 aa1.95□□□□□ -2.1
HIF1A-204ENST00000539097 GNEQ9Y223 722 aaKnown RBP1.95□□□□□ -2.1
HIF1A-204ENST00000539097 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP1.95□□□□□ -2.1
HIF1A-204ENST00000539097 SRPK2P78362 688 aaKnown RBP1.95□□□□□ -2.1
HIF1A-204ENST00000539097 SLAIN2Q9P270 581 aa1.95□□□□□ -2.1
HIF1A-204ENST00000539097 RABGEF1Q9UJ41 708 aa1.95□□□□□ -2.1
HIF1A-204ENST00000539097 DDX11L8A8MPP1 907 aa1.95□□□□□ -2.1
HIF1A-204ENST00000539097 PTPREP23469 700 aa1.95□□□□□ -2.1
HIF1A-204ENST00000539097 CLK2P49760 499 aaKnown RBP1.95□□□□□ -2.1
HIF1A-204ENST00000539097 RSBN1LQ6PCB5 846 aaPredicted RBP1.95□□□□□ -2.1
HIF1A-204ENST00000539097 TREML4Q6UXN2 200 aa1.95□□□□□ -2.1
HIF1A-204ENST00000539097 PROSER2Q86WR7 435 aaPredicted RBP1.95□□□□□ -2.1
HIF1A-204ENST00000539097 STAG2Q8N3U4 1231 aa1.95□□□□□ -2.1
HIF1A-204ENST00000539097 KRTAP9-9Q9BYP9 154 aa1.95□□□□□ -2.1
HIF1A-204ENST00000539097 KRTAP9-4Q9BYQ2 154 aa1.95□□□□□ -2.1
HIF1A-204ENST00000539097 NRG2O14511 850 aaPredicted RBP1.94□□□□□ -2.1
HIF1A-204ENST00000539097 GCGRP47871 477 aa1.94□□□□□ -2.1
HIF1A-204ENST00000539097 PUS10Q3MIT2 529 aaKnown RBP1.94□□□□□ -2.1
HIF1A-204ENST00000539097 TMEM134Q9H6X4 195 aa1.94□□□□□ -2.1
HIF1A-204ENST00000539097 FUT2Q10981 343 aa1.94□□□□□ -2.1
HIF1A-204ENST00000539097 KRTAP9-6A0A140TA67 174 aa1.94□□□□□ -2.1
HIF1A-204ENST00000539097 GSK3AP49840 483 aa1.94□□□□□ -2.1
HIF1A-204ENST00000539097 ANKRD24Q8TF21 1146 aa1.94□□□□□ -2.1
HIF1A-204ENST00000539097 KCNK17Q96T54 332 aa1.94□□□□□ -2.1
HIF1A-204ENST00000539097 OCSTAMPQ9BR26 566 aa1.94□□□□□ -2.1
HIF1A-204ENST00000539097 EGFL7Q9UHF1 273 aa1.94□□□□□ -2.1
HIF1A-204ENST00000539097 PIK3CDO00329 1044 aa1.93□□□□□ -2.1
HIF1A-204ENST00000539097 ARHGAP33O14559 1287 aa1.93□□□□□ -2.1
HIF1A-204ENST00000539097 MAP7D1Q3KQU3 841 aa1.93□□□□□ -2.1
HIF1A-204ENST00000539097 KMT5BQ4FZB7 885 aa1.93□□□□□ -2.1
HIF1A-204ENST00000539097 CFAP70Q5T0N1 1121 aa1.93□□□□□ -2.1
HIF1A-204ENST00000539097 FRMD6Q96NE9 622 aa1.93□□□□□ -2.1
HIF1A-204ENST00000539097 ZBED2Q9BTP6 218 aa1.93□□□□□ -2.1
HIF1A-204ENST00000539097 NDUFB9Q9Y6M9 179 aa1.93□□□□□ -2.1
HIF1A-204ENST00000539097 POTECB2RU33 542 aa1.93□□□□□ -2.1
HIF1A-204ENST00000539097 ACTN4O43707 911 aaKnown RBP1.93□□□□□ -2.1
HIF1A-204ENST00000539097 ATG7O95352 703 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms