RNA–Protein interactions for RNA: ENST00000538923.1

MRE11-208, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 5

Gene MRE11, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-208ENST00000538923 SLAIN2Q9P270 581 aa13.72□□□□□ -0.21
MRE11-208ENST00000538923 RIMS2Q9UQ26 1411 aa13.72□□□□□ -0.21
MRE11-208ENST00000538923 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.71□□□□□ -0.21
MRE11-208ENST00000538923 ROBO1Q9Y6N7 1651 aa13.7□□□□□ -0.22
MRE11-208ENST00000538923 CLCN6P51797 869 aa13.69□□□□□ -0.22
MRE11-208ENST00000538923 TBX22Q9Y458 520 aa13.69□□□□□ -0.22
MRE11-208ENST00000538923 NCOA3Q9Y6Q9 1424 aa13.68□□□□□ -0.22
MRE11-208ENST00000538923 RGL2O15211 777 aa13.68□□□□□ -0.22
MRE11-208ENST00000538923 SGIP1Q9BQI5 828 aa13.68□□□□□ -0.22
MRE11-208ENST00000538923 CHGAP10645 457 aaKnown RBP13.67□□□□□ -0.22
MRE11-208ENST00000538923 POTEAQ6S8J7 498 aa13.67□□□□□ -0.22
MRE11-208ENST00000538923 ZNF467Q7Z7K2 595 aaPredicted RBP13.67□□□□□ -0.22
MRE11-208ENST00000538923 MS4A3Q96HJ5 214 aa13.67□□□□□ -0.22
MRE11-208ENST00000538923 TMEM131LA2VDJ0 1609 aa13.67□□□□□ -0.22
MRE11-208ENST00000538923 ROCK1Q13464 1354 aa13.67□□□□□ -0.22
MRE11-208ENST00000538923 UNC13BO14795 1591 aa13.66□□□□□ -0.22
MRE11-208ENST00000538923 JCADQ9P266 1359 aa13.66□□□□□ -0.22
MRE11-208ENST00000538923 RIOK3O14730 519 aaKnown RBP13.65□□□□□ -0.22
MRE11-208ENST00000538923 C14orf37Q86TY3 774 aa13.65□□□□□ -0.22
MRE11-208ENST00000538923 IFNL1Q8IU54 200 aa13.65□□□□□ -0.22
MRE11-208ENST00000538923 RNF25Q96BH1 459 aaPredicted RBP13.65□□□□□ -0.22
MRE11-208ENST00000538923 PCDHB8Q9UN66 801 aa13.65□□□□□ -0.22
MRE11-208ENST00000538923 GCC2Q8IWJ2 1684 aa13.64□□□□□ -0.23
MRE11-208ENST00000538923 PIK3R4Q99570 1358 aa13.64□□□□□ -0.23
MRE11-208ENST00000538923 GALR2O43603 387 aaPredicted RBP13.64□□□□□ -0.23
MRE11-208ENST00000538923 GABBR2O75899 941 aa13.64□□□□□ -0.23
MRE11-208ENST00000538923 CADPS2Q86UW7 1296 aa13.64□□□□□ -0.23
MRE11-208ENST00000538923 ADAMTS13Q76LX8 1427 aa13.64□□□□□ -0.23
MRE11-208ENST00000538923 DIP2AQ14689 1571 aa13.63□□□□□ -0.23
MRE11-208ENST00000538923 C19orf44Q9H6X5 657 aa13.63□□□□□ -0.23
MRE11-208ENST00000538923 NUP155O75694 1391 aa13.62□□□□□ -0.23
MRE11-208ENST00000538923 ATF3P18847 181 aa13.62□□□□□ -0.23
MRE11-208ENST00000538923 NUTM2DQ5VT03 806 aaPredicted RBP13.62□□□□□ -0.23
MRE11-208ENST00000538923 PHLPP1O60346 1717 aa13.61□□□□□ -0.23
MRE11-208ENST00000538923 SPATA31A6Q5VVP1 1343 aa13.61□□□□□ -0.23
MRE11-208ENST00000538923 IQGAP3Q86VI3 1631 aa13.61□□□□□ -0.23
MRE11-208ENST00000538923 E9PCH4 1651 aa13.6□□□□□ -0.23
MRE11-208ENST00000538923 CHD2O14647 1828 aaKnown RBP13.6□□□□□ -0.23
MRE11-208ENST00000538923 TRPM2O94759 1503 aa13.59□□□□□ -0.23
MRE11-208ENST00000538923 AMOTL2Q9Y2J4 779 aa13.59□□□□□ -0.23
MRE11-208ENST00000538923 COL16A1Q07092 1604 aaPredicted RBP13.59□□□□□ -0.23
MRE11-208ENST00000538923 TAOK2Q9UL54 1235 aa13.58□□□□□ -0.24
MRE11-208ENST00000538923 ITGAEP38570 1179 aa13.57□□□□□ -0.24
MRE11-208ENST00000538923 MEX3CQ5U5Q3 659 aaKnown RBP13.57□□□□□ -0.24
MRE11-208ENST00000538923 MYO5BQ9ULV0 1848 aa13.57□□□□□ -0.24
MRE11-208ENST00000538923 AHDC1Q5TGY3 1603 aaPredicted RBP13.57□□□□□ -0.24
MRE11-208ENST00000538923 DCCP43146 1447 aa13.56□□□□□ -0.24
MRE11-208ENST00000538923 VGFO15240 615 aaPredicted RBP13.56□□□□□ -0.24
MRE11-208ENST00000538923 ZNF772Q68DY9 489 aaPredicted RBP13.56□□□□□ -0.24
MRE11-208ENST00000538923 PTPRUQ92729 1446 aa13.56□□□□□ -0.24
MRE11-208ENST00000538923 LRP6O75581 1613 aa13.55□□□□□ -0.24
MRE11-208ENST00000538923 PDAP1Q13442 181 aaKnown RBP13.55□□□□□ -0.24
MRE11-208ENST00000538923 BRINP3Q76B58 766 aa13.55□□□□□ -0.24
MRE11-208ENST00000538923 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.55□□□□□ -0.24
MRE11-208ENST00000538923 ZNF326Q5BKZ1 582 aaKnown RBP13.54□□□□□ -0.24
MRE11-208ENST00000538923 TRPC6Q9Y210 931 aa13.53□□□□□ -0.24
MRE11-208ENST00000538923 SETBP1Q9Y6X0 1596 aa13.53□□□□□ -0.24
MRE11-208ENST00000538923 PSEN1P49768 467 aa13.52□□□□□ -0.25
MRE11-208ENST00000538923 METP08581 1390 aa13.51□□□□□ -0.25
MRE11-208ENST00000538923 SHPRHQ149N8 1683 aa13.5□□□□□ -0.25
MRE11-208ENST00000538923 ASXL1Q8IXJ9 1541 aa13.5□□□□□ -0.25
MRE11-208ENST00000538923 XRN1Q8IZH2 1706 aaKnown RBP13.5□□□□□ -0.25
MRE11-208ENST00000538923 MST1RQ04912 1400 aa13.49□□□□□ -0.25
MRE11-208ENST00000538923 SETD5Q9C0A6 1442 aa13.49□□□□□ -0.25
MRE11-208ENST00000538923 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.49□□□□□ -0.25
MRE11-208ENST00000538923 NUTM2BA6NNL0 878 aaPredicted RBP13.49□□□□□ -0.25
MRE11-208ENST00000538923 NUTM2EB1AL46 878 aaPredicted RBP13.49□□□□□ -0.25
MRE11-208ENST00000538923 NUTM2AQ8IVF1 878 aaPredicted RBP13.49□□□□□ -0.25
MRE11-208ENST00000538923 ZFP91Q96JP5 570 aaPredicted RBP13.49□□□□□ -0.25
MRE11-208ENST00000538923 NRXN3Q9Y4C0 1643 aa13.49□□□□□ -0.25
MRE11-208ENST00000538923 RXRBP28702 533 aa13.48□□□□□ -0.25
MRE11-208ENST00000538923 TIE1P35590 1138 aa13.48□□□□□ -0.25
MRE11-208ENST00000538923 PPARGC1BQ86YN6 1023 aaKnown RBP13.48□□□□□ -0.25
MRE11-208ENST00000538923 TRIM52Q96A61 297 aa13.48□□□□□ -0.25
MRE11-208ENST00000538923 LRRC59Q96AG4 307 aaKnown RBP13.48□□□□□ -0.25
MRE11-208ENST00000538923 DCBLD2Q96PD2 775 aa13.48□□□□□ -0.25
MRE11-208ENST00000538923 TMEM106CQ9BVX2 250 aa13.48□□□□□ -0.25
MRE11-208ENST00000538923 ADGRL3Q9HAR2 1447 aa13.47□□□□□ -0.25
MRE11-208ENST00000538923 SPHKAPQ2M3C7 1700 aa13.47□□□□□ -0.25
MRE11-208ENST00000538923 SETD1AO15047 1707 aaKnown RBP13.47□□□□□ -0.25
MRE11-208ENST00000538923 STK25O00506 426 aa13.46□□□□□ -0.25
MRE11-208ENST00000538923 BMP2KQ9NSY1 1161 aaPredicted RBP13.46□□□□□ -0.25
MRE11-208ENST00000538923 AFF2P51816 1311 aa13.45□□□□□ -0.26
MRE11-208ENST00000538923 NEXMIFQ5QGS0 1516 aa13.45□□□□□ -0.26
MRE11-208ENST00000538923 CDK12Q9NYV4 1490 aaPredicted RBP13.45□□□□□ -0.26
MRE11-208ENST00000538923 UPF1Q92900 1129 aaKnown RBP eCLIP13.45□□□□□ -0.26
MRE11-208ENST00000538923 CLTCL1P53675 1640 aa13.44□□□□□ -0.26
MRE11-208ENST00000538923 TTLL13PA6NNM8 815 aa13.43□□□□□ -0.26
MRE11-208ENST00000538923 NAIPQ13075 1403 aa13.43□□□□□ -0.26
MRE11-208ENST00000538923 BCL11BQ9C0K0 894 aaPredicted RBP13.43□□□□□ -0.26
MRE11-208ENST00000538923 PNPLA6Q8IY17 1366 aa13.43□□□□□ -0.26
MRE11-208ENST00000538923 NHSL1Q5SYE7 1610 aa13.42□□□□□ -0.26
MRE11-208ENST00000538923 PTCH1Q13635 1447 aa13.42□□□□□ -0.26
MRE11-208ENST00000538923 RRBP1Q9P2E9 1410 aaKnown RBP13.42□□□□□ -0.26
MRE11-208ENST00000538923 DDX17Q92841 729 aaKnown RBP13.42□□□□□ -0.26
MRE11-208ENST00000538923 C8orf37Q96NL8 207 aa13.42□□□□□ -0.26
MRE11-208ENST00000538923 STK24Q9Y6E0 443 aa13.42□□□□□ -0.26
MRE11-208ENST00000538923 C1orf167Q5SNV9 1468 aa13.42□□□□□ -0.26
MRE11-208ENST00000538923 RPGRIP1LQ68CZ1 1315 aa13.41□□□□□ -0.26
MRE11-208ENST00000538923 PRAG1Q86YV5 1406 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms