RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 DMRT2Q9Y5R5 561 aa32.63■■■□□ 2.81
RAB40C-204ENST00000538492 TCERG1O14776 1098 aaKnown RBP32.62■■■□□ 2.81
RAB40C-204ENST00000538492 PREX1Q8TCU6 1659 aa32.62■■■□□ 2.81
RAB40C-204ENST00000538492 FAM69CQ0P6D2 419 aa32.62■■■□□ 2.81
RAB40C-204ENST00000538492 CGNL1Q0VF96 1302 aa32.61■■■□□ 2.81
RAB40C-204ENST00000538492 FBXO31Q5XUX0 539 aaPredicted RBP32.6■■■□□ 2.81
RAB40C-204ENST00000538492 SHPRHQ149N8 1683 aa32.59■■■□□ 2.81
RAB40C-204ENST00000538492 SKAP1Q86WV1 359 aa32.59■■■□□ 2.81
RAB40C-204ENST00000538492 NKTRP30414 1462 aaKnown RBP32.58■■■□□ 2.81
RAB40C-204ENST00000538492 E9PSI1 815 aa32.58■■■□□ 2.81
RAB40C-204ENST00000538492 ANP32AP39687 249 aaKnown RBP32.57■■■□□ 2.8
RAB40C-204ENST00000538492 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.57■■■□□ 2.8
RAB40C-204ENST00000538492 MTHFSP49914 203 aa32.57■■■□□ 2.8
RAB40C-204ENST00000538492 TMEM131LA2VDJ0 1609 aa32.56■■■□□ 2.8
RAB40C-204ENST00000538492 USP32Q8NFA0 1604 aa32.56■■■□□ 2.8
RAB40C-204ENST00000538492 ZFYVE9O95405 1425 aa32.56■■■□□ 2.8
RAB40C-204ENST00000538492 ANKRD36BQ8N2N9 1353 aa32.55■■■□□ 2.8
RAB40C-204ENST00000538492 NEUROD2Q15784 382 aa32.55■■■□□ 2.8
RAB40C-204ENST00000538492 TSPOAP1O95153 1857 aa32.54■■■□□ 2.8
RAB40C-204ENST00000538492 PUS7Q96PZ0 661 aaKnown RBP32.54■■■□□ 2.8
RAB40C-204ENST00000538492 BCAR3O75815 825 aa32.53■■■□□ 2.8
RAB40C-204ENST00000538492 WWC1Q8IX03 1113 aa32.53■■■□□ 2.8
RAB40C-204ENST00000538492 NOP58Q9Y2X3 529 aaKnown RBP32.52■■■□□ 2.8
RAB40C-204ENST00000538492 RRP7AQ9Y3A4 280 aaKnown RBP32.52■■■□□ 2.8
RAB40C-204ENST00000538492 SRPK2P78362 688 aaKnown RBP32.52■■■□□ 2.8
RAB40C-204ENST00000538492 NGEFQ8N5V2 710 aa32.52■■■□□ 2.8
RAB40C-204ENST00000538492 PDE4AP27815 886 aa32.51■■■□□ 2.8
RAB40C-204ENST00000538492 PAK3O75914 559 aaPredicted RBP32.49■■■□□ 2.79
RAB40C-204ENST00000538492 RUNDC1Q96C34 613 aa32.48■■■□□ 2.79
RAB40C-204ENST00000538492 MINK1Q8N4C8 1332 aaPredicted RBP32.48■■■□□ 2.79
RAB40C-204ENST00000538492 MS4A1P11836 297 aa32.47■■■□□ 2.79
RAB40C-204ENST00000538492 IPO9Q96P70 1041 aaKnown RBP32.47■■■□□ 2.79
RAB40C-204ENST00000538492 RIMBP3CA6NJZ7 1639 aa32.47■■■□□ 2.79
RAB40C-204ENST00000538492 RIMBP3BA6NNM3 1639 aa32.47■■■□□ 2.79
RAB40C-204ENST00000538492 RIMBP3Q9UFD9 1639 aa32.47■■■□□ 2.79
RAB40C-204ENST00000538492 DIP2BQ9P265 1576 aa32.47■■■□□ 2.79
RAB40C-204ENST00000538492 CFAP53Q96M91 514 aa32.47■■■□□ 2.79
RAB40C-204ENST00000538492 PRAM1Q96QH2 718 aa32.47■■■□□ 2.79
RAB40C-204ENST00000538492 STAG3Q9UJ98 1225 aa32.46■■■□□ 2.79
RAB40C-204ENST00000538492 TCP11L2Q8N4U5 519 aa32.46■■■□□ 2.79
RAB40C-204ENST00000538492 KDM2BQ8NHM5 1336 aa32.46■■■□□ 2.79
RAB40C-204ENST00000538492 NPM2Q86SE8 214 aaKnown RBP32.45■■■□□ 2.79
RAB40C-204ENST00000538492 A0A1W2PP64 1363 aa32.45■■■□□ 2.78
RAB40C-204ENST00000538492 BACH2Q9BYV9 841 aa32.45■■■□□ 2.78
RAB40C-204ENST00000538492 PTPRMP28827 1452 aa32.44■■■□□ 2.78
RAB40C-204ENST00000538492 POGKQ9P215 609 aa32.44■■■□□ 2.78
RAB40C-204ENST00000538492 YTHDC2Q9H6S0 1430 aaKnown RBP32.43■■■□□ 2.78
RAB40C-204ENST00000538492 NSD2O96028 1365 aa32.42■■■□□ 2.78
RAB40C-204ENST00000538492 CENPQQ7L2Z9 268 aaPredicted RBP32.4■■■□□ 2.78
RAB40C-204ENST00000538492 IQSEC2Q5JU85 1478 aa32.39■■■□□ 2.78
RAB40C-204ENST00000538492 GGNBP2Q9H3C7 697 aa32.39■■■□□ 2.78
RAB40C-204ENST00000538492 ABCC11Q96J66 1382 aa32.37■■■□□ 2.77
RAB40C-204ENST00000538492 U2AF1L5P0DN76 240 aaPredicted RBP32.37■■■□□ 2.77
RAB40C-204ENST00000538492 U2AF1Q01081 240 aaKnown RBP eCLIP32.37■■■□□ 2.77
RAB40C-204ENST00000538492 MLECQ14165 292 aa32.36■■■□□ 2.77
RAB40C-204ENST00000538492 ALKQ9UM73 1620 aa32.36■■■□□ 2.77
RAB40C-204ENST00000538492 NINLQ9Y2I6 1382 aa32.35■■■□□ 2.77
RAB40C-204ENST00000538492 CLTCQ00610 1675 aaKnown RBP32.35■■■□□ 2.77
RAB40C-204ENST00000538492 ZBTB47Q9UFB7 747 aaPredicted RBP32.34■■■□□ 2.77
RAB40C-204ENST00000538492 ATAD2Q6PL18 1390 aa32.34■■■□□ 2.77
RAB40C-204ENST00000538492 PHF23Q9BUL5 403 aaPredicted RBP32.32■■■□□ 2.76
RAB40C-204ENST00000538492 TERF2IPQ9NYB0 399 aa32.32■■■□□ 2.76
RAB40C-204ENST00000538492 CANXP27824 592 aaKnown RBP32.31■■■□□ 2.76
RAB40C-204ENST00000538492 CDK19Q9BWU1 502 aa32.3■■■□□ 2.76
RAB40C-204ENST00000538492 CD163L1Q9NR16 1453 aa32.28■■■□□ 2.76
RAB40C-204ENST00000538492 FYB1O15117 783 aa32.28■■■□□ 2.76
RAB40C-204ENST00000538492 WDR63Q8IWG1 891 aa32.28■■■□□ 2.76
RAB40C-204ENST00000538492 FRAT1Q92837 279 aaPredicted RBP32.28■■■□□ 2.76
RAB40C-204ENST00000538492 AGLP35573 1532 aa32.27■■■□□ 2.76
RAB40C-204ENST00000538492 PANK1Q8TE04 598 aa32.27■■■□□ 2.76
RAB40C-204ENST00000538492 REREQ9P2R6 1566 aa32.27■■■□□ 2.76
RAB40C-204ENST00000538492 U2SURPO15042 1029 aaKnown RBP32.26■■■□□ 2.75
RAB40C-204ENST00000538492 PDE3AQ14432 1141 aa32.25■■■□□ 2.75
RAB40C-204ENST00000538492 CCDC27Q2M243 656 aa32.25■■■□□ 2.75
RAB40C-204ENST00000538492 PPP6R1Q9UPN7 881 aa32.25■■■□□ 2.75
RAB40C-204ENST00000538492 CABP1Q9NZU7 370 aa32.24■■■□□ 2.75
RAB40C-204ENST00000538492 A2ML1A8K2U0 1454 aa32.24■■■□□ 2.75
RAB40C-204ENST00000538492 COG6Q9Y2V7 657 aa32.24■■■□□ 2.75
RAB40C-204ENST00000538492 RARSP54136 660 aaKnown RBP32.23■■■□□ 2.75
RAB40C-204ENST00000538492 WAPLQ7Z5K2 1190 aa32.23■■■□□ 2.75
RAB40C-204ENST00000538492 HDGFL2Q7Z4V5 671 aaPredicted RBP32.22■■■□□ 2.75
RAB40C-204ENST00000538492 ARHGEF40Q8TER5 1519 aa32.22■■■□□ 2.75
RAB40C-204ENST00000538492 BCL2L13Q9BXK5 485 aa32.21■■■□□ 2.75
RAB40C-204ENST00000538492 NBR1Q14596 966 aa32.21■■■□□ 2.75
RAB40C-204ENST00000538492 RGS3P49796 1198 aa32.2■■■□□ 2.75
RAB40C-204ENST00000538492 RIMS2Q9UQ26 1411 aa32.2■■■□□ 2.75
RAB40C-204ENST00000538492 SPATA31D1Q6ZQQ2 1576 aa32.19■■■□□ 2.74
RAB40C-204ENST00000538492 NLRP1Q9C000 1473 aa32.19■■■□□ 2.74
RAB40C-204ENST00000538492 ANKRD26Q9UPS8 1709 aa32.19■■■□□ 2.74
RAB40C-204ENST00000538492 ADGRB2O60241 1585 aa32.17■■■□□ 2.74
RAB40C-204ENST00000538492 IGHDP01880 384 aa32.17■■■□□ 2.74
RAB40C-204ENST00000538492 COL3A1P02461 1466 aaPredicted RBP32.16■■■□□ 2.74
RAB40C-204ENST00000538492 MYH16Q9H6N6 1097 aa32.16■■■□□ 2.74
RAB40C-204ENST00000538492 CLUAP1Q96AJ1 413 aa32.15■■■□□ 2.74
RAB40C-204ENST00000538492 PLEKHF1Q96S99 279 aa32.15■■■□□ 2.74
RAB40C-204ENST00000538492 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.14■■■□□ 2.74
RAB40C-204ENST00000538492 TNNQ9UQP3 1299 aa32.14■■■□□ 2.74
RAB40C-204ENST00000538492 MED14O60244 1454 aa32.14■■■□□ 2.74
RAB40C-204ENST00000538492 TSR2Q969E8 191 aaKnown RBP32.12■■■□□ 2.73
RAB40C-204ENST00000538492 SETD1AO15047 1707 aaKnown RBP32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms