RNA–Protein interactions for RNA: ENST00000538446.5

CDK2AP1-204, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK2AP1, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-204ENST00000538446 IQSEC2Q5JU85 1478 aa17.97■□□□□ 0.47
CDK2AP1-204ENST00000538446 MINK1Q8N4C8 1332 aaPredicted RBP17.95■□□□□ 0.46
CDK2AP1-204ENST00000538446 ARHGEF28Q8N1W1 1705 aaKnown RBP17.95■□□□□ 0.46
CDK2AP1-204ENST00000538446 ATF3P18847 181 aa17.94■□□□□ 0.46
CDK2AP1-204ENST00000538446 EIF4G2P78344 907 aaKnown RBP eCLIP17.94■□□□□ 0.46
CDK2AP1-204ENST00000538446 DCCP43146 1447 aa17.94■□□□□ 0.46
CDK2AP1-204ENST00000538446 ST20-MTHFSA0A0A6YYL1 179 aa17.93■□□□□ 0.46
CDK2AP1-204ENST00000538446 CADPS2Q86UW7 1296 aa17.93■□□□□ 0.46
CDK2AP1-204ENST00000538446 HIRIP3Q9BW71 556 aaPredicted RBP17.93■□□□□ 0.46
CDK2AP1-204ENST00000538446 SBNO2Q9Y2G9 1366 aa17.91■□□□□ 0.46
CDK2AP1-204ENST00000538446 NALCNQ8IZF0 1738 aa17.89■□□□□ 0.46
CDK2AP1-204ENST00000538446 CDC42BPGQ6DT37 1551 aa17.89■□□□□ 0.45
CDK2AP1-204ENST00000538446 WASLO00401 505 aaPredicted RBP17.89■□□□□ 0.45
CDK2AP1-204ENST00000538446 SLC24A1O60721 1099 aa17.89■□□□□ 0.45
CDK2AP1-204ENST00000538446 TOM1O60784 492 aa17.89■□□□□ 0.45
CDK2AP1-204ENST00000538446 HSPA5P11021 654 aaKnown RBP17.89■□□□□ 0.45
CDK2AP1-204ENST00000538446 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.89■□□□□ 0.45
CDK2AP1-204ENST00000538446 ADGRB2O60241 1585 aa17.88■□□□□ 0.45
CDK2AP1-204ENST00000538446 UBAP1LF5GYI3 381 aa17.88■□□□□ 0.45
CDK2AP1-204ENST00000538446 EVC2Q86UK5 1308 aa17.88■□□□□ 0.45
CDK2AP1-204ENST00000538446 XIRP1Q702N8 1843 aaKnown RBP17.87■□□□□ 0.45
CDK2AP1-204ENST00000538446 TESK2Q96S53 571 aa17.87■□□□□ 0.45
CDK2AP1-204ENST00000538446 CDK19Q9BWU1 502 aa17.86■□□□□ 0.45
CDK2AP1-204ENST00000538446 SLAIN2Q9P270 581 aa17.86■□□□□ 0.45
CDK2AP1-204ENST00000538446 QRICH2Q9H0J4 1663 aa17.86■□□□□ 0.45
CDK2AP1-204ENST00000538446 SRPK2P78362 688 aaKnown RBP17.85■□□□□ 0.45
CDK2AP1-204ENST00000538446 MST1RQ04912 1400 aa17.84■□□□□ 0.45
CDK2AP1-204ENST00000538446 NUTM2FA1L443 756 aa17.84■□□□□ 0.45
CDK2AP1-204ENST00000538446 TMF1P82094 1093 aa17.84■□□□□ 0.45
CDK2AP1-204ENST00000538446 TULP4Q9NRJ4 1543 aa17.82■□□□□ 0.44
CDK2AP1-204ENST00000538446 C1orf167Q5SNV9 1468 aa17.82■□□□□ 0.44
CDK2AP1-204ENST00000538446 ANKARQ7Z5J8 1434 aa17.82■□□□□ 0.44
CDK2AP1-204ENST00000538446 SCAF1Q9H7N4 1312 aaKnown RBP17.81■□□□□ 0.44
CDK2AP1-204ENST00000538446 PIP4K2BP78356 416 aa17.81■□□□□ 0.44
CDK2AP1-204ENST00000538446 CDCA8Q53HL2 280 aa17.81■□□□□ 0.44
CDK2AP1-204ENST00000538446 CABP2Q9NPB3 220 aa17.81■□□□□ 0.44
CDK2AP1-204ENST00000538446 NUDT16Q96DE0 195 aaKnown RBP17.8■□□□□ 0.44
CDK2AP1-204ENST00000538446 PRR36Q9H6K5 1346 aa17.79■□□□□ 0.44
CDK2AP1-204ENST00000538446 ESCO1Q5FWF5 840 aa17.79■□□□□ 0.44
CDK2AP1-204ENST00000538446 ATAD2Q6PL18 1390 aa17.79■□□□□ 0.44
CDK2AP1-204ENST00000538446 DISP3Q9P2K9 1392 aa17.79■□□□□ 0.44
CDK2AP1-204ENST00000538446 FMN2Q9NZ56 1722 aa17.78■□□□□ 0.44
CDK2AP1-204ENST00000538446 PUS7Q96PZ0 661 aaKnown RBP17.78■□□□□ 0.44
CDK2AP1-204ENST00000538446 ATP7BP35670 1465 aa17.77■□□□□ 0.44
CDK2AP1-204ENST00000538446 BRINP3Q76B58 766 aa17.77■□□□□ 0.44
CDK2AP1-204ENST00000538446 ORAI2Q96SN7 254 aa17.77■□□□□ 0.44
CDK2AP1-204ENST00000538446 CCDC61Q9Y6R9 512 aa17.77■□□□□ 0.44
CDK2AP1-204ENST00000538446 FBXO41Q8TF61 875 aa17.75■□□□□ 0.43
CDK2AP1-204ENST00000538446 PHF8Q9UPP1 1060 aa17.75■□□□□ 0.43
CDK2AP1-204ENST00000538446 PPIP5K1Q6PFW1 1433 aa17.72■□□□□ 0.43
CDK2AP1-204ENST00000538446 PMFBP1Q8TBY8 1022 aa17.72■□□□□ 0.43
CDK2AP1-204ENST00000538446 POLR3GLQ9BT43 218 aa17.72■□□□□ 0.43
CDK2AP1-204ENST00000538446 CABP1Q9NZU7 370 aa17.72■□□□□ 0.43
CDK2AP1-204ENST00000538446 USP32Q8NFA0 1604 aa17.72■□□□□ 0.43
CDK2AP1-204ENST00000538446 PLEKHG3A1L390 1219 aa17.71■□□□□ 0.43
CDK2AP1-204ENST00000538446 NGDNQ8NEJ9 315 aaKnown RBP17.71■□□□□ 0.43
CDK2AP1-204ENST00000538446 TMC1Q8TDI8 760 aa17.71■□□□□ 0.43
CDK2AP1-204ENST00000538446 NPHP3Q7Z494 1330 aa17.71■□□□□ 0.42
CDK2AP1-204ENST00000538446 NINLQ9Y2I6 1382 aa17.7■□□□□ 0.42
CDK2AP1-204ENST00000538446 FOXO3O43524 673 aa17.7■□□□□ 0.42
CDK2AP1-204ENST00000538446 ROBO1Q9Y6N7 1651 aa17.7■□□□□ 0.42
CDK2AP1-204ENST00000538446 C11orf95C9JLR9 678 aaPredicted RBP17.69■□□□□ 0.42
CDK2AP1-204ENST00000538446 ACEP12821 1306 aa17.68■□□□□ 0.42
CDK2AP1-204ENST00000538446 KIF7Q2M1P5 1343 aa17.68■□□□□ 0.42
CDK2AP1-204ENST00000538446 KIF1AQ12756 1690 aa17.67■□□□□ 0.42
CDK2AP1-204ENST00000538446 DDX17Q92841 729 aaKnown RBP17.67■□□□□ 0.42
CDK2AP1-204ENST00000538446 SLC12A5Q9H2X9 1139 aa17.67■□□□□ 0.42
CDK2AP1-204ENST00000538446 POLR3AO14802 1390 aaPredicted RBP17.66■□□□□ 0.42
CDK2AP1-204ENST00000538446 PSME1Q06323 249 aa17.66■□□□□ 0.42
CDK2AP1-204ENST00000538446 TERF2IPQ9NYB0 399 aa17.66■□□□□ 0.42
CDK2AP1-204ENST00000538446 TOPAZ1Q8N9V7 1692 aa17.66■□□□□ 0.42
CDK2AP1-204ENST00000538446 ITSN1Q15811 1721 aa17.66■□□□□ 0.42
CDK2AP1-204ENST00000538446 CCDC7Q96M83 1385 aa17.66■□□□□ 0.42
CDK2AP1-204ENST00000538446 XPCQ01831 940 aaPredicted RBP17.65■□□□□ 0.42
CDK2AP1-204ENST00000538446 HDGFL2Q7Z4V5 671 aaPredicted RBP17.65■□□□□ 0.42
CDK2AP1-204ENST00000538446 KRT28Q7Z3Y7 464 aa17.64■□□□□ 0.41
CDK2AP1-204ENST00000538446 ZNF692Q9BU19 519 aaPredicted RBP17.64■□□□□ 0.41
CDK2AP1-204ENST00000538446 WASHC2AQ641Q2 1341 aa17.64■□□□□ 0.41
CDK2AP1-204ENST00000538446 AHDC1Q5TGY3 1603 aaPredicted RBP17.64■□□□□ 0.41
CDK2AP1-204ENST00000538446 HSPA1LP34931 641 aa17.63■□□□□ 0.41
CDK2AP1-204ENST00000538446 SOS2Q07890 1332 aaPredicted RBP17.63■□□□□ 0.41
CDK2AP1-204ENST00000538446 ANKRD36BQ8N2N9 1353 aa17.62■□□□□ 0.41
CDK2AP1-204ENST00000538446 CPSF1Q10570 1443 aaKnown RBP17.62■□□□□ 0.41
CDK2AP1-204ENST00000538446 RGPD8O14715 1765 aaPredicted RBP17.61■□□□□ 0.41
CDK2AP1-204ENST00000538446 A0A1W2PP64 1363 aa17.61■□□□□ 0.41
CDK2AP1-204ENST00000538446 KTN1Q86UP2 1357 aaKnown RBP17.61■□□□□ 0.41
CDK2AP1-204ENST00000538446 USP6P35125 1406 aa17.61■□□□□ 0.41
CDK2AP1-204ENST00000538446 PXDNQ92626 1479 aa17.61■□□□□ 0.41
CDK2AP1-204ENST00000538446 LRRC59Q96AG4 307 aaKnown RBP17.6■□□□□ 0.41
CDK2AP1-204ENST00000538446 BRD4O60885 1362 aaPredicted RBP17.6■□□□□ 0.41
CDK2AP1-204ENST00000538446 CD163L1Q9NR16 1453 aa17.6■□□□□ 0.41
CDK2AP1-204ENST00000538446 NHSL1Q5SYE7 1610 aa17.6■□□□□ 0.41
CDK2AP1-204ENST00000538446 SBNO1A3KN83 1393 aa17.59■□□□□ 0.41
CDK2AP1-204ENST00000538446 PAK3O75914 559 aaPredicted RBP17.59■□□□□ 0.41
CDK2AP1-204ENST00000538446 SPATA31A3Q5VYP0 1347 aa17.57■□□□□ 0.4
CDK2AP1-204ENST00000538446 ZNF316A6NFI3 1004 aaPredicted RBP17.57■□□□□ 0.4
CDK2AP1-204ENST00000538446 PHLPP1O60346 1717 aa17.57■□□□□ 0.4
CDK2AP1-204ENST00000538446 TNS3Q68CZ2 1445 aa17.56■□□□□ 0.4
CDK2AP1-204ENST00000538446 EDC4Q6P2E9 1401 aaKnown RBP17.56■□□□□ 0.4
CDK2AP1-204ENST00000538446 LMOD2Q6P5Q4 547 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms