RNA–Protein interactions for RNA: ENST00000537590.5

SLC39A1-209, Transcript of solute carrier family 39 member 1, humanhuman

TSL 2 BASIC

Gene SLC39A1, Length 2,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-209ENST00000537590 TMC1Q8TDI8 760 aa26.02■■□□□ 1.76
SLC39A1-209ENST00000537590 SLC12A5Q9H2X9 1139 aa26.02■■□□□ 1.76
SLC39A1-209ENST00000537590 PARD3Q8TEW0 1356 aa26.02■■□□□ 1.76
SLC39A1-209ENST00000537590 KNSTRNQ9Y448 316 aa26■■□□□ 1.75
SLC39A1-209ENST00000537590 CPS1P31327 1500 aa25.99■■□□□ 1.75
SLC39A1-209ENST00000537590 RALBP1Q15311 655 aa25.99■■□□□ 1.75
SLC39A1-209ENST00000537590 CARD14Q9BXL6 1004 aa25.99■■□□□ 1.75
SLC39A1-209ENST00000537590 TECPR2O15040 1411 aa25.99■■□□□ 1.75
SLC39A1-209ENST00000537590 SRPK2P78362 688 aaKnown RBP25.98■■□□□ 1.75
SLC39A1-209ENST00000537590 PTPRUQ92729 1446 aa25.98■■□□□ 1.75
SLC39A1-209ENST00000537590 AMER1Q5JTC6 1135 aaPredicted RBP25.97■■□□□ 1.75
SLC39A1-209ENST00000537590 MYBBP1AQ9BQG0 1328 aaKnown RBP25.96■■□□□ 1.75
SLC39A1-209ENST00000537590 ROBO2Q9HCK4 1378 aa25.96■■□□□ 1.75
SLC39A1-209ENST00000537590 FAM9BQ8IZU0 186 aa25.95■■□□□ 1.74
SLC39A1-209ENST00000537590 PUS7Q96PZ0 661 aaKnown RBP25.94■■□□□ 1.74
SLC39A1-209ENST00000537590 CDK19Q9BWU1 502 aa25.94■■□□□ 1.74
SLC39A1-209ENST00000537590 FAM135BQ49AJ0 1406 aa25.93■■□□□ 1.74
SLC39A1-209ENST00000537590 TBX22Q9Y458 520 aa25.92■■□□□ 1.74
SLC39A1-209ENST00000537590 DIP2AQ14689 1571 aa25.92■■□□□ 1.74
SLC39A1-209ENST00000537590 NSD3Q9BZ95 1437 aa25.9■■□□□ 1.74
SLC39A1-209ENST00000537590 ANKLE2Q86XL3 938 aa25.9■■□□□ 1.74
SLC39A1-209ENST00000537590 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.89■■□□□ 1.73
SLC39A1-209ENST00000537590 SIRT1Q96EB6 747 aa25.88■■□□□ 1.73
SLC39A1-209ENST00000537590 AMOTL2Q9Y2J4 779 aa25.88■■□□□ 1.73
SLC39A1-209ENST00000537590 ATAD2Q6PL18 1390 aa25.88■■□□□ 1.73
SLC39A1-209ENST00000537590 BRD4O60885 1362 aaPredicted RBP25.86■■□□□ 1.73
SLC39A1-209ENST00000537590 ANKRD36BQ8N2N9 1353 aa25.86■■□□□ 1.73
SLC39A1-209ENST00000537590 NLRP13Q86W25 1043 aa25.85■■□□□ 1.73
SLC39A1-209ENST00000537590 XRN1Q8IZH2 1706 aaKnown RBP25.85■■□□□ 1.73
SLC39A1-209ENST00000537590 NPC1L1Q9UHC9 1359 aa25.85■■□□□ 1.73
SLC39A1-209ENST00000537590 A0A1W2PP64 1363 aa25.84■■□□□ 1.73
SLC39A1-209ENST00000537590 WASLO00401 505 aaPredicted RBP25.84■■□□□ 1.73
SLC39A1-209ENST00000537590 CD163L1Q9NR16 1453 aa25.84■■□□□ 1.73
SLC39A1-209ENST00000537590 HNRNPUQ00839 825 aaKnown RBP eCLIP25.83■■□□□ 1.73
SLC39A1-209ENST00000537590 PNISRQ8TF01 805 aaKnown RBP25.81■■□□□ 1.72
SLC39A1-209ENST00000537590 CABP1Q9NZU7 370 aa25.81■■□□□ 1.72
SLC39A1-209ENST00000537590 NINLQ9Y2I6 1382 aa25.81■■□□□ 1.72
SLC39A1-209ENST00000537590 USP32Q8NFA0 1604 aa25.81■■□□□ 1.72
SLC39A1-209ENST00000537590 PPP2R1AP30153 589 aa25.8■■□□□ 1.72
SLC39A1-209ENST00000537590 NCKAP5LQ9HCH0 1330 aa25.79■■□□□ 1.72
SLC39A1-209ENST00000537590 PTCH1Q13635 1447 aa25.79■■□□□ 1.72
SLC39A1-209ENST00000537590 KDM4FA0A1W2PPD8 638 aa25.79■■□□□ 1.72
SLC39A1-209ENST00000537590 ADGRB2O60241 1585 aa25.79■■□□□ 1.72
SLC39A1-209ENST00000537590 KCNA6P17658 529 aa25.78■■□□□ 1.72
SLC39A1-209ENST00000537590 CHD2O14647 1828 aaKnown RBP25.78■■□□□ 1.72
SLC39A1-209ENST00000537590 NPHP4O75161 1426 aaPredicted RBP25.77■■□□□ 1.72
SLC39A1-209ENST00000537590 PIK3R4Q99570 1358 aa25.75■■□□□ 1.71
SLC39A1-209ENST00000537590 NUDT16Q96DE0 195 aaKnown RBP25.75■■□□□ 1.71
SLC39A1-209ENST00000537590 PRR36Q9H6K5 1346 aa25.74■■□□□ 1.71
SLC39A1-209ENST00000537590 PPIP5K1Q6PFW1 1433 aa25.74■■□□□ 1.71
SLC39A1-209ENST00000537590 TERF2IPQ9NYB0 399 aa25.74■■□□□ 1.71
SLC39A1-209ENST00000537590 ATP7BP35670 1465 aa25.74■■□□□ 1.71
SLC39A1-209ENST00000537590 CGNL1Q0VF96 1302 aa25.74■■□□□ 1.71
SLC39A1-209ENST00000537590 NUTM2FA1L443 756 aa25.73■■□□□ 1.71
SLC39A1-209ENST00000537590 SENP3-EIF4A1A0A087X0R7 540 aa25.71■■□□□ 1.71
SLC39A1-209ENST00000537590 TNNT2P45379 298 aaPredicted RBP25.71■■□□□ 1.71
SLC39A1-209ENST00000537590 HDGFL2Q7Z4V5 671 aaPredicted RBP25.7■■□□□ 1.7
SLC39A1-209ENST00000537590 MORC1Q86VD1 984 aa25.7■■□□□ 1.7
SLC39A1-209ENST00000537590 RBM33Q96EV2 1170 aaKnown RBP25.68■■□□□ 1.7
SLC39A1-209ENST00000537590 TOPAZ1Q8N9V7 1692 aa25.68■■□□□ 1.7
SLC39A1-209ENST00000537590 HSPA2P54652 639 aa25.67■■□□□ 1.7
SLC39A1-209ENST00000537590 CCDC61Q9Y6R9 512 aa25.67■■□□□ 1.7
SLC39A1-209ENST00000537590 RGPD8O14715 1765 aaPredicted RBP25.67■■□□□ 1.7
SLC39A1-209ENST00000537590 CDC42BPGQ6DT37 1551 aa25.66■■□□□ 1.7
SLC39A1-209ENST00000537590 KIF20BQ96Q89 1820 aa25.66■■□□□ 1.7
SLC39A1-209ENST00000537590 GGNBP2Q9H3C7 697 aa25.66■■□□□ 1.7
SLC39A1-209ENST00000537590 ITSN1Q15811 1721 aa25.66■■□□□ 1.7
SLC39A1-209ENST00000537590 CPSF1Q10570 1443 aaKnown RBP25.65■■□□□ 1.7
SLC39A1-209ENST00000537590 AKAP12Q02952 1782 aa25.65■■□□□ 1.7
SLC39A1-209ENST00000537590 NALCNQ8IZF0 1738 aa25.65■■□□□ 1.7
SLC39A1-209ENST00000537590 ANKRD26Q9UPS8 1709 aa25.65■■□□□ 1.7
SLC39A1-209ENST00000537590 NSD2O96028 1365 aa25.64■■□□□ 1.69
SLC39A1-209ENST00000537590 FYB1O15117 783 aa25.63■■□□□ 1.69
SLC39A1-209ENST00000537590 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.63■■□□□ 1.69
SLC39A1-209ENST00000537590 MON2Q7Z3U7 1717 aa25.63■■□□□ 1.69
SLC39A1-209ENST00000537590 SCAF1Q9H7N4 1312 aaKnown RBP25.63■■□□□ 1.69
SLC39A1-209ENST00000537590 NKTRP30414 1462 aaKnown RBP25.62■■□□□ 1.69
SLC39A1-209ENST00000537590 GTF3C3Q9Y5Q9 886 aa25.59■■□□□ 1.69
SLC39A1-209ENST00000537590 ZBED9Q6R2W3 1325 aa25.59■■□□□ 1.69
SLC39A1-209ENST00000537590 FMN2Q9NZ56 1722 aa25.58■■□□□ 1.69
SLC39A1-209ENST00000537590 LMTK3Q96Q04 1460 aa25.58■■□□□ 1.69
SLC39A1-209ENST00000537590 EDC4Q6P2E9 1401 aaKnown RBP25.57■■□□□ 1.68
SLC39A1-209ENST00000537590 NWD1Q149M9 1564 aa25.57■■□□□ 1.68
SLC39A1-209ENST00000537590 ADAMTS8Q9UP79 889 aa25.56■■□□□ 1.68
SLC39A1-209ENST00000537590 ACEP12821 1306 aa25.56■■□□□ 1.68
SLC39A1-209ENST00000537590 PMFBP1Q8TBY8 1022 aa25.54■■□□□ 1.68
SLC39A1-209ENST00000537590 MTHFSP49914 203 aa25.54■■□□□ 1.68
SLC39A1-209ENST00000537590 PLEKHG3A1L390 1219 aa25.53■■□□□ 1.68
SLC39A1-209ENST00000537590 NME9Q86XW9 330 aa25.53■■□□□ 1.68
SLC39A1-209ENST00000537590 ZRANB1Q9UGI0 708 aa25.53■■□□□ 1.68
SLC39A1-209ENST00000537590 NRKQ7Z2Y5 1582 aa25.53■■□□□ 1.68
SLC39A1-209ENST00000537590 BLMP54132 1417 aaPredicted RBP25.53■■□□□ 1.68
SLC39A1-209ENST00000537590 WDR43Q15061 677 aaKnown RBP eCLIP25.53■■□□□ 1.68
SLC39A1-209ENST00000537590 SHPRHQ149N8 1683 aa25.52■■□□□ 1.68
SLC39A1-209ENST00000537590 POLR3AO14802 1390 aaPredicted RBP25.52■■□□□ 1.68
SLC39A1-209ENST00000537590 STRCP1A6NGW2 1772 aa25.52■■□□□ 1.68
SLC39A1-209ENST00000537590 STRCQ7RTU9 1775 aa25.5■■□□□ 1.67
SLC39A1-209ENST00000537590 ZNF692Q9BU19 519 aaPredicted RBP25.5■■□□□ 1.67
SLC39A1-209ENST00000537590 ADGRL3Q9HAR2 1447 aa25.5■■□□□ 1.67
SLC39A1-209ENST00000537590 FBLN1P23142 703 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms