RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 TMF1P82094 1093 aa21.85■■□□□ 1.09
SFSWAP-206ENST00000537582 AEBP2Q6ZN18 517 aaPredicted RBP21.85■■□□□ 1.09
SFSWAP-206ENST00000537582 NWD1Q149M9 1564 aa21.85■■□□□ 1.09
SFSWAP-206ENST00000537582 SIRT1Q96EB6 747 aa21.84■■□□□ 1.09
SFSWAP-206ENST00000537582 STRCP1A6NGW2 1772 aa21.83■■□□□ 1.09
SFSWAP-206ENST00000537582 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.83■■□□□ 1.08
SFSWAP-206ENST00000537582 DDX10Q13206 875 aaKnown RBP21.81■■□□□ 1.08
SFSWAP-206ENST00000537582 ZNF335Q9H4Z2 1342 aaPredicted RBP21.8■■□□□ 1.08
SFSWAP-206ENST00000537582 CABP2Q9NPB3 220 aa21.78■■□□□ 1.08
SFSWAP-206ENST00000537582 EVC2Q86UK5 1308 aa21.76■■□□□ 1.07
SFSWAP-206ENST00000537582 CDK19Q9BWU1 502 aa21.75■■□□□ 1.07
SFSWAP-206ENST00000537582 NKTRP30414 1462 aaKnown RBP21.75■■□□□ 1.07
SFSWAP-206ENST00000537582 NALCNQ8IZF0 1738 aa21.74■■□□□ 1.07
SFSWAP-206ENST00000537582 ADGRB2O60241 1585 aa21.74■■□□□ 1.07
SFSWAP-206ENST00000537582 PROSER2Q86WR7 435 aaPredicted RBP21.74■■□□□ 1.07
SFSWAP-206ENST00000537582 DMRT2Q9Y5R5 561 aa21.74■■□□□ 1.07
SFSWAP-206ENST00000537582 WASLO00401 505 aaPredicted RBP21.73■■□□□ 1.07
SFSWAP-206ENST00000537582 SRPK2P78362 688 aaKnown RBP21.73■■□□□ 1.07
SFSWAP-206ENST00000537582 MYOM1P52179 1685 aa21.72■■□□□ 1.07
SFSWAP-206ENST00000537582 SLC24A1O60721 1099 aa21.71■■□□□ 1.07
SFSWAP-206ENST00000537582 CDCA8Q53HL2 280 aa21.71■■□□□ 1.07
SFSWAP-206ENST00000537582 DIEXFQ68CQ4 756 aaKnown RBP21.7■■□□□ 1.06
SFSWAP-206ENST00000537582 TMEM94Q12767 1356 aa21.7■■□□□ 1.06
SFSWAP-206ENST00000537582 NUTM2FA1L443 756 aa21.7■■□□□ 1.06
SFSWAP-206ENST00000537582 ADGRL3Q9HAR2 1447 aa21.69■■□□□ 1.06
SFSWAP-206ENST00000537582 PRR36Q9H6K5 1346 aa21.68■■□□□ 1.06
SFSWAP-206ENST00000537582 C14orf37Q86TY3 774 aa21.67■■□□□ 1.06
SFSWAP-206ENST00000537582 LRRC7Q96NW7 1537 aa21.66■■□□□ 1.06
SFSWAP-206ENST00000537582 SLC12A5Q9H2X9 1139 aa21.66■■□□□ 1.06
SFSWAP-206ENST00000537582 TMC1Q8TDI8 760 aa21.65■■□□□ 1.06
SFSWAP-206ENST00000537582 ATP7BP35670 1465 aa21.65■■□□□ 1.06
SFSWAP-206ENST00000537582 CDC42BPGQ6DT37 1551 aa21.65■■□□□ 1.06
SFSWAP-206ENST00000537582 USP32Q8NFA0 1604 aa21.64■■□□□ 1.05
SFSWAP-206ENST00000537582 NUDT16Q96DE0 195 aaKnown RBP21.64■■□□□ 1.05
SFSWAP-206ENST00000537582 PUS7Q96PZ0 661 aaKnown RBP21.64■■□□□ 1.05
SFSWAP-206ENST00000537582 XIRP1Q702N8 1843 aaKnown RBP21.64■■□□□ 1.05
SFSWAP-206ENST00000537582 PANK3Q9H999 370 aa21.63■■□□□ 1.05
SFSWAP-206ENST00000537582 ATAD2Q6PL18 1390 aa21.63■■□□□ 1.05
SFSWAP-206ENST00000537582 FMN2Q9NZ56 1722 aa21.62■■□□□ 1.05
SFSWAP-206ENST00000537582 CABP1Q9NZU7 370 aa21.61■■□□□ 1.05
SFSWAP-206ENST00000537582 LTBP4Q8N2S1 1624 aa21.6■■□□□ 1.05
SFSWAP-206ENST00000537582 PPIP5K1Q6PFW1 1433 aa21.59■■□□□ 1.05
SFSWAP-206ENST00000537582 C19orf44Q9H6X5 657 aa21.58■■□□□ 1.05
SFSWAP-206ENST00000537582 CD163L1Q9NR16 1453 aa21.58■■□□□ 1.05
SFSWAP-206ENST00000537582 TOPAZ1Q8N9V7 1692 aa21.58■■□□□ 1.05
SFSWAP-206ENST00000537582 CARD14Q9BXL6 1004 aa21.57■■□□□ 1.04
SFSWAP-206ENST00000537582 NCOA3Q9Y6Q9 1424 aa21.57■■□□□ 1.04
SFSWAP-206ENST00000537582 RGPD8O14715 1765 aaPredicted RBP21.57■■□□□ 1.04
SFSWAP-206ENST00000537582 CCDC61Q9Y6R9 512 aa21.57■■□□□ 1.04
SFSWAP-206ENST00000537582 PER1O15534 1290 aaPredicted RBP21.56■■□□□ 1.04
SFSWAP-206ENST00000537582 CNGB1Q14028 1251 aaPredicted RBP21.56■■□□□ 1.04
SFSWAP-206ENST00000537582 A0A1W2PP64 1363 aa21.55■■□□□ 1.04
SFSWAP-206ENST00000537582 ANKARQ7Z5J8 1434 aa21.55■■□□□ 1.04
SFSWAP-206ENST00000537582 MSH6P52701 1360 aa21.54■■□□□ 1.04
SFSWAP-206ENST00000537582 ANKRD36BQ8N2N9 1353 aa21.54■■□□□ 1.04
SFSWAP-206ENST00000537582 NINLQ9Y2I6 1382 aa21.54■■□□□ 1.04
SFSWAP-206ENST00000537582 PMFBP1Q8TBY8 1022 aa21.53■■□□□ 1.04
SFSWAP-206ENST00000537582 DCCP43146 1447 aa21.51■■□□□ 1.03
SFSWAP-206ENST00000537582 MST1RQ04912 1400 aa21.51■■□□□ 1.03
SFSWAP-206ENST00000537582 NSD3Q9BZ95 1437 aa21.51■■□□□ 1.03
SFSWAP-206ENST00000537582 ATF3P18847 181 aa21.51■■□□□ 1.03
SFSWAP-206ENST00000537582 MIER1Q8N108 512 aa21.5■■□□□ 1.03
SFSWAP-206ENST00000537582 ORAI2Q96SN7 254 aa21.5■■□□□ 1.03
SFSWAP-206ENST00000537582 C1orf167Q5SNV9 1468 aa21.5■■□□□ 1.03
SFSWAP-206ENST00000537582 ITSN1Q15811 1721 aa21.49■■□□□ 1.03
SFSWAP-206ENST00000537582 ACEP12821 1306 aa21.49■■□□□ 1.03
SFSWAP-206ENST00000537582 CPSF1Q10570 1443 aaKnown RBP21.49■■□□□ 1.03
SFSWAP-206ENST00000537582 PLEKHG3A1L390 1219 aa21.48■■□□□ 1.03
SFSWAP-206ENST00000537582 TERF2IPQ9NYB0 399 aa21.48■■□□□ 1.03
SFSWAP-206ENST00000537582 ESCO1Q5FWF5 840 aa21.48■■□□□ 1.03
SFSWAP-206ENST00000537582 HDGFL2Q7Z4V5 671 aaPredicted RBP21.47■■□□□ 1.03
SFSWAP-206ENST00000537582 CADPS2Q86UW7 1296 aa21.47■■□□□ 1.03
SFSWAP-206ENST00000537582 KNSTRNQ9Y448 316 aa21.47■■□□□ 1.03
SFSWAP-206ENST00000537582 AMER1Q5JTC6 1135 aaPredicted RBP21.46■■□□□ 1.03
SFSWAP-206ENST00000537582 KTN1Q86UP2 1357 aaKnown RBP21.45■■□□□ 1.02
SFSWAP-206ENST00000537582 CC2D1BQ5T0F9 858 aaKnown RBP21.45■■□□□ 1.02
SFSWAP-206ENST00000537582 PHF8Q9UPP1 1060 aa21.45■■□□□ 1.02
SFSWAP-206ENST00000537582 AKAP12Q02952 1782 aa21.45■■□□□ 1.02
SFSWAP-206ENST00000537582 POLR3AO14802 1390 aaPredicted RBP21.44■■□□□ 1.02
SFSWAP-206ENST00000537582 NGDNQ8NEJ9 315 aaKnown RBP21.44■■□□□ 1.02
SFSWAP-206ENST00000537582 MON2Q7Z3U7 1717 aa21.43■■□□□ 1.02
SFSWAP-206ENST00000537582 ANP32CO43423 234 aa21.43■■□□□ 1.02
SFSWAP-206ENST00000537582 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.42■■□□□ 1.02
SFSWAP-206ENST00000537582 PRKRIP1Q9H875 184 aaPredicted RBP21.41■■□□□ 1.02
SFSWAP-206ENST00000537582 USP6P35125 1406 aa21.41■■□□□ 1.02
SFSWAP-206ENST00000537582 NRKQ7Z2Y5 1582 aa21.4■■□□□ 1.02
SFSWAP-206ENST00000537582 EDC4Q6P2E9 1401 aaKnown RBP21.4■■□□□ 1.02
SFSWAP-206ENST00000537582 DDX17Q92841 729 aaKnown RBP21.4■■□□□ 1.02
SFSWAP-206ENST00000537582 SLAIN2Q9P270 581 aa21.4■■□□□ 1.02
SFSWAP-206ENST00000537582 FOXO3O43524 673 aa21.39■■□□□ 1.01
SFSWAP-206ENST00000537582 XPCQ01831 940 aaPredicted RBP21.39■■□□□ 1.01
SFSWAP-206ENST00000537582 SSH2Q76I76 1423 aa21.38■■□□□ 1.01
SFSWAP-206ENST00000537582 ZNF692Q9BU19 519 aaPredicted RBP21.38■■□□□ 1.01
SFSWAP-206ENST00000537582 CGNL1Q0VF96 1302 aa21.38■■□□□ 1.01
SFSWAP-206ENST00000537582 BRINP3Q76B58 766 aa21.37■■□□□ 1.01
SFSWAP-206ENST00000537582 NME9Q86XW9 330 aa21.37■■□□□ 1.01
SFSWAP-206ENST00000537582 ZRANB1Q9UGI0 708 aa21.37■■□□□ 1.01
SFSWAP-206ENST00000537582 FYB1O15117 783 aa21.36■■□□□ 1.01
SFSWAP-206ENST00000537582 GGNBP2Q9H3C7 697 aa21.36■■□□□ 1.01
SFSWAP-206ENST00000537582 TTC21BQ7Z4L5 1316 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms