RNA–Protein interactions for RNA: ENST00000536727.5

CADM1-204, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CADM1, Length 3,520 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-204ENST00000536727 CCDC141Q6ZP82 1450 aa16.81■□□□□ 0.28
CADM1-204ENST00000536727 RSPH4AQ5TD94 716 aa16.81■□□□□ 0.28
CADM1-204ENST00000536727 SHANK2Q9UPX8 1470 aa16.81■□□□□ 0.28
CADM1-204ENST00000536727 RBM42Q9BTD8 480 aaKnown RBP16.81■□□□□ 0.28
CADM1-204ENST00000536727 TPM2P07951 284 aa16.8■□□□□ 0.28
CADM1-204ENST00000536727 SSFA2P28290 1259 aa16.8■□□□□ 0.28
CADM1-204ENST00000536727 TRAK1Q9UPV9 953 aa16.8■□□□□ 0.28
CADM1-204ENST00000536727 GRIN2AQ12879 1464 aa16.8■□□□□ 0.28
CADM1-204ENST00000536727 ANKRD45Q5TZF3 282 aa16.79■□□□□ 0.28
CADM1-204ENST00000536727 ATP10BO94823 1461 aa16.79■□□□□ 0.28
CADM1-204ENST00000536727 TRIM27P14373 513 aa16.78■□□□□ 0.28
CADM1-204ENST00000536727 AAMPQ13685 434 aa16.78■□□□□ 0.28
CADM1-204ENST00000536727 SKOR2Q2VWA4 1001 aaPredicted RBP16.78■□□□□ 0.28
CADM1-204ENST00000536727 NOB1Q9ULX3 412 aaKnown RBP16.78■□□□□ 0.28
CADM1-204ENST00000536727 DDX19BQ9UMR2 479 aa16.78■□□□□ 0.28
CADM1-204ENST00000536727 CDC42BPAQ5VT25 1732 aa16.77■□□□□ 0.28
CADM1-204ENST00000536727 MRC2Q9UBG0 1479 aa16.77■□□□□ 0.27
CADM1-204ENST00000536727 MCTP1Q6DN14 999 aa16.76■□□□□ 0.27
CADM1-204ENST00000536727 WDR63Q8IWG1 891 aa16.76■□□□□ 0.27
CADM1-204ENST00000536727 TMEM57Q8N5G2 664 aa16.76■□□□□ 0.27
CADM1-204ENST00000536727 SSH1Q8WYL5 1049 aa16.76■□□□□ 0.27
CADM1-204ENST00000536727 C1orf115Q9H7X2 142 aa16.76■□□□□ 0.27
CADM1-204ENST00000536727 ADCY10Q96PN6 1610 aa16.76■□□□□ 0.27
CADM1-204ENST00000536727 PDCL3Q9H2J4 239 aa16.76■□□□□ 0.27
CADM1-204ENST00000536727 ISY1Q9ULR0 285 aaKnown RBP16.76■□□□□ 0.27
CADM1-204ENST00000536727 CCDC173Q0VFZ6 552 aa16.76■□□□□ 0.27
CADM1-204ENST00000536727 CAVIN1Q6NZI2 390 aaKnown RBP16.76■□□□□ 0.27
CADM1-204ENST00000536727 ZSCAN30Q86W11 494 aa16.76■□□□□ 0.27
CADM1-204ENST00000536727 ZNF692Q9BU19 519 aaPredicted RBP16.76■□□□□ 0.27
CADM1-204ENST00000536727 CD2BP2O95400 341 aaKnown RBP16.75■□□□□ 0.27
CADM1-204ENST00000536727 FOXD4L5Q5VV16 416 aaPredicted RBP16.75■□□□□ 0.27
CADM1-204ENST00000536727 FOXD4L4Q8WXT5 416 aaPredicted RBP16.75■□□□□ 0.27
CADM1-204ENST00000536727 SCAF11Q99590 1463 aaKnown RBP16.75■□□□□ 0.27
CADM1-204ENST00000536727 SAFB2Q14151 953 aaKnown RBP eCLIP16.75■□□□□ 0.27
CADM1-204ENST00000536727 ABCC10Q5T3U5 1492 aa16.74■□□□□ 0.27
CADM1-204ENST00000536727 NUP160Q12769 1436 aa16.74■□□□□ 0.27
CADM1-204ENST00000536727 TPRNQ4KMQ1 711 aa16.74■□□□□ 0.27
CADM1-204ENST00000536727 ABCC2Q92887 1545 aa16.74■□□□□ 0.27
CADM1-204ENST00000536727 XPCQ01831 940 aaPredicted RBP16.74■□□□□ 0.27
CADM1-204ENST00000536727 CALD1Q05682 793 aaKnown RBP16.74■□□□□ 0.27
CADM1-204ENST00000536727 RAB3GAP1Q15042 981 aa16.73■□□□□ 0.27
CADM1-204ENST00000536727 ATF7IPQ6VMQ6 1270 aa16.73■□□□□ 0.27
CADM1-204ENST00000536727 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
CADM1-204ENST00000536727 EIF2AK4Q9P2K8 1649 aaKnown RBP16.73■□□□□ 0.27
CADM1-204ENST00000536727 NSD3Q9BZ95 1437 aa16.72■□□□□ 0.27
CADM1-204ENST00000536727 ARHGAP5Q13017 1502 aa16.72■□□□□ 0.27
CADM1-204ENST00000536727 K7ELQ4 463 aaPredicted RBP16.72■□□□□ 0.27
CADM1-204ENST00000536727 GAS2L2Q8NHY3 880 aa16.72■□□□□ 0.27
CADM1-204ENST00000536727 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.71■□□□□ 0.27
CADM1-204ENST00000536727 ELL2O00472 640 aaPredicted RBP16.71■□□□□ 0.27
CADM1-204ENST00000536727 SMC5Q8IY18 1101 aa16.71■□□□□ 0.27
CADM1-204ENST00000536727 VIRMAQ69YN4 1812 aaKnown RBP16.71■□□□□ 0.27
CADM1-204ENST00000536727 CLASP1Q7Z460 1538 aa16.71■□□□□ 0.27
CADM1-204ENST00000536727 SYCP2Q9BX26 1530 aa16.71■□□□□ 0.27
CADM1-204ENST00000536727 CHD1LQ86WJ1 897 aa16.7■□□□□ 0.26
CADM1-204ENST00000536727 CIZ1Q9ULV3 898 aaPredicted RBP16.7■□□□□ 0.26
CADM1-204ENST00000536727 ADGRF5Q8IZF2 1346 aa16.7■□□□□ 0.26
CADM1-204ENST00000536727 APBB1O00213 710 aa16.7■□□□□ 0.26
CADM1-204ENST00000536727 TMEM132EQ6IEE7 984 aa16.7■□□□□ 0.26
CADM1-204ENST00000536727 MPNDQ8N594 471 aa16.69■□□□□ 0.26
CADM1-204ENST00000536727 POLR3AO14802 1390 aaPredicted RBP16.69■□□□□ 0.26
CADM1-204ENST00000536727 HDAC1Q13547 482 aaPredicted RBP16.69■□□□□ 0.26
CADM1-204ENST00000536727 NPC1L1Q9UHC9 1359 aa16.69■□□□□ 0.26
CADM1-204ENST00000536727 PTMAP06454 111 aaKnown RBP16.69■□□□□ 0.26
CADM1-204ENST00000536727 DNTTIP2Q5QJE6 756 aaKnown RBP16.69■□□□□ 0.26
CADM1-204ENST00000536727 NUTM2DQ5VT03 806 aaPredicted RBP16.69■□□□□ 0.26
CADM1-204ENST00000536727 BAG4O95429 457 aaKnown RBP16.68■□□□□ 0.26
CADM1-204ENST00000536727 PTMSP20962 102 aa16.68■□□□□ 0.26
CADM1-204ENST00000536727 RNF214Q8ND24 703 aa16.68■□□□□ 0.26
CADM1-204ENST00000536727 RBM25P49756 843 aaKnown RBP16.68■□□□□ 0.26
CADM1-204ENST00000536727 AFAP1Q8N556 730 aa16.68■□□□□ 0.26
CADM1-204ENST00000536727 SNX21Q969T3 373 aa16.68■□□□□ 0.26
CADM1-204ENST00000536727 UQCRHLA0A096LP55 91 aa16.67■□□□□ 0.26
CADM1-204ENST00000536727 UQCRHP07919 91 aa16.67■□□□□ 0.26
CADM1-204ENST00000536727 KIF3BO15066 747 aa16.67■□□□□ 0.26
CADM1-204ENST00000536727 IPO8O15397 1037 aaKnown RBP16.67■□□□□ 0.26
CADM1-204ENST00000536727 PRDM10Q9NQV6 1147 aa16.67■□□□□ 0.26
CADM1-204ENST00000536727 OFD1O75665 1012 aa16.67■□□□□ 0.26
CADM1-204ENST00000536727 RBM27Q9P2N5 1060 aaKnown RBP16.67■□□□□ 0.26
CADM1-204ENST00000536727 RTEL1-TNFRSF6BF6WH68 1400 aa16.67■□□□□ 0.26
CADM1-204ENST00000536727 PRPF40AO75400 957 aaKnown RBP16.66■□□□□ 0.26
CADM1-204ENST00000536727 TBC1D9Q6ZT07 1266 aa16.66■□□□□ 0.26
CADM1-204ENST00000536727 RIPK4P57078 832 aa16.66■□□□□ 0.26
CADM1-204ENST00000536727 MYO5CQ9NQX4 1742 aa16.66■□□□□ 0.26
CADM1-204ENST00000536727 SYNJ2O15056 1496 aa16.66■□□□□ 0.26
CADM1-204ENST00000536727 SYNMO15061 1565 aa16.65■□□□□ 0.26
CADM1-204ENST00000536727 FOXD4L6Q3SYB3 417 aaPredicted RBP16.65■□□□□ 0.26
CADM1-204ENST00000536727 FOXD4L3Q6VB84 417 aaPredicted RBP16.65■□□□□ 0.26
CADM1-204ENST00000536727 NUCB1Q02818 461 aa16.65■□□□□ 0.26
CADM1-204ENST00000536727 CHAMP1Q96JM3 812 aa16.65■□□□□ 0.26
CADM1-204ENST00000536727 SLC24A1O60721 1099 aa16.64■□□□□ 0.25
CADM1-204ENST00000536727 KLHL40Q2TBA0 621 aa16.64■□□□□ 0.25
CADM1-204ENST00000536727 SAMD9LQ8IVG5 1584 aa16.64■□□□□ 0.25
CADM1-204ENST00000536727 SPAG9O60271 1321 aaKnown RBP16.64■□□□□ 0.25
CADM1-204ENST00000536727 GGNBP2Q9H3C7 697 aa16.63■□□□□ 0.25
CADM1-204ENST00000536727 ZBTB40Q9NUA8 1239 aa16.63■□□□□ 0.25
CADM1-204ENST00000536727 TMPOP42166 694 aaKnown RBP16.63■□□□□ 0.25
CADM1-204ENST00000536727 DDIT3P35638 169 aa16.62■□□□□ 0.25
CADM1-204ENST00000536727 RBSNQ9H1K0 784 aa16.62■□□□□ 0.25
CADM1-204ENST00000536727 ZMYM3Q14202 1370 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms