RNA–Protein interactions for RNA: ENST00000536554.5

TOM1L1-203, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-203ENST00000536554 KDM5AP29375 1690 aaKnown RBP11.33□□□□□ -0.6
TOM1L1-203ENST00000536554 PTPRMP28827 1452 aa11.32□□□□□ -0.6
TOM1L1-203ENST00000536554 KIAA1210Q9ULL0 1709 aa11.32□□□□□ -0.6
TOM1L1-203ENST00000536554 MYO5BQ9ULV0 1848 aa11.32□□□□□ -0.6
TOM1L1-203ENST00000536554 LAMC1P11047 1609 aa11.32□□□□□ -0.6
TOM1L1-203ENST00000536554 KDM4FA0A1W2PPD8 638 aa11.31□□□□□ -0.6
TOM1L1-203ENST00000536554 LTKP29376 864 aa11.31□□□□□ -0.6
TOM1L1-203ENST00000536554 TMEM132EQ6IEE7 984 aa11.31□□□□□ -0.6
TOM1L1-203ENST00000536554 TXNDC2Q86VQ3 553 aa11.31□□□□□ -0.6
TOM1L1-203ENST00000536554 TESK2Q96S53 571 aa11.3□□□□□ -0.6
TOM1L1-203ENST00000536554 EID1Q9Y6B2 187 aa11.3□□□□□ -0.6
TOM1L1-203ENST00000536554 WASHC2AQ641Q2 1341 aa11.3□□□□□ -0.6
TOM1L1-203ENST00000536554 SCAF11Q99590 1463 aaKnown RBP11.3□□□□□ -0.6
TOM1L1-203ENST00000536554 UBR1Q8IWV7 1749 aa11.3□□□□□ -0.6
TOM1L1-203ENST00000536554 SETBP1Q9Y6X0 1596 aa11.29□□□□□ -0.6
TOM1L1-203ENST00000536554 ARHGAP23Q9P227 1491 aa11.29□□□□□ -0.6
TOM1L1-203ENST00000536554 DDX10Q13206 875 aaKnown RBP11.29□□□□□ -0.6
TOM1L1-203ENST00000536554 SLIT1O75093 1534 aa11.28□□□□□ -0.6
TOM1L1-203ENST00000536554 ADGRB1O14514 1584 aa11.28□□□□□ -0.6
TOM1L1-203ENST00000536554 SETD1BQ9UPS6 1966 aaKnown RBP11.28□□□□□ -0.6
TOM1L1-203ENST00000536554 CCDC7Q96M83 1385 aa11.27□□□□□ -0.6
TOM1L1-203ENST00000536554 KIF7Q2M1P5 1343 aa11.27□□□□□ -0.61
TOM1L1-203ENST00000536554 SLC24A1O60721 1099 aa11.27□□□□□ -0.61
TOM1L1-203ENST00000536554 TRAK1Q9UPV9 953 aa11.27□□□□□ -0.61
TOM1L1-203ENST00000536554 PLEKHG1Q9ULL1 1385 aa11.26□□□□□ -0.61
TOM1L1-203ENST00000536554 MYO3AQ8NEV4 1616 aa11.26□□□□□ -0.61
TOM1L1-203ENST00000536554 ALKQ9UM73 1620 aa11.26□□□□□ -0.61
TOM1L1-203ENST00000536554 POTEIP0CG38 1075 aa11.26□□□□□ -0.61
TOM1L1-203ENST00000536554 EIF3AQ14152 1382 aaKnown RBP11.26□□□□□ -0.61
TOM1L1-203ENST00000536554 CEP170BQ9Y4F5 1589 aaPredicted RBP11.26□□□□□ -0.61
TOM1L1-203ENST00000536554 ANKLE2Q86XL3 938 aa11.25□□□□□ -0.61
TOM1L1-203ENST00000536554 IQGAP1P46940 1657 aa11.25□□□□□ -0.61
TOM1L1-203ENST00000536554 MNX1P50219 401 aaPredicted RBP11.25□□□□□ -0.61
TOM1L1-203ENST00000536554 TMF1P82094 1093 aa11.25□□□□□ -0.61
TOM1L1-203ENST00000536554 BCANQ96GW7 911 aa11.25□□□□□ -0.61
TOM1L1-203ENST00000536554 TBX22Q9Y458 520 aa11.25□□□□□ -0.61
TOM1L1-203ENST00000536554 STK26Q9P289 416 aa11.24□□□□□ -0.61
TOM1L1-203ENST00000536554 CIZ1Q9ULV3 898 aaPredicted RBP11.24□□□□□ -0.61
TOM1L1-203ENST00000536554 METP08581 1390 aa11.23□□□□□ -0.61
TOM1L1-203ENST00000536554 CENPJQ9HC77 1338 aaPredicted RBP11.23□□□□□ -0.61
TOM1L1-203ENST00000536554 ADAMTS13Q76LX8 1427 aa11.23□□□□□ -0.61
TOM1L1-203ENST00000536554 SIRT1Q96EB6 747 aa11.23□□□□□ -0.61
TOM1L1-203ENST00000536554 YTHDC2Q9H6S0 1430 aaKnown RBP11.23□□□□□ -0.61
TOM1L1-203ENST00000536554 ABCC11Q96J66 1382 aa11.23□□□□□ -0.61
TOM1L1-203ENST00000536554 MED14O60244 1454 aa11.22□□□□□ -0.61
TOM1L1-203ENST00000536554 ECM2O94769 699 aaPredicted RBP11.22□□□□□ -0.61
TOM1L1-203ENST00000536554 ASXL1Q8IXJ9 1541 aa11.22□□□□□ -0.61
TOM1L1-203ENST00000536554 LRPPRCP42704 1394 aaKnown RBP11.22□□□□□ -0.61
TOM1L1-203ENST00000536554 SBNO2Q9Y2G9 1366 aa11.22□□□□□ -0.61
TOM1L1-203ENST00000536554 NRXN3Q9Y4C0 1643 aa11.22□□□□□ -0.61
TOM1L1-203ENST00000536554 CD44P16070 742 aaKnown RBP11.21□□□□□ -0.61
TOM1L1-203ENST00000536554 CLCN6P51797 869 aa11.21□□□□□ -0.61
TOM1L1-203ENST00000536554 CDCA8Q53HL2 280 aa11.21□□□□□ -0.61
TOM1L1-203ENST00000536554 SLC26A8Q96RN1 970 aa11.21□□□□□ -0.61
TOM1L1-203ENST00000536554 DISP3Q9P2K9 1392 aa11.21□□□□□ -0.61
TOM1L1-203ENST00000536554 ZNF142P52746 1687 aaPredicted RBP11.21□□□□□ -0.62
TOM1L1-203ENST00000536554 NUBP1P53384 320 aa11.2□□□□□ -0.62
TOM1L1-203ENST00000536554 PRAM1Q96QH2 718 aa11.19□□□□□ -0.62
TOM1L1-203ENST00000536554 POLR3GLQ9BT43 218 aa11.19□□□□□ -0.62
TOM1L1-203ENST00000536554 POGKQ9P215 609 aa11.19□□□□□ -0.62
TOM1L1-203ENST00000536554 SETD1AO15047 1707 aaKnown RBP11.18□□□□□ -0.62
TOM1L1-203ENST00000536554 WAPLQ7Z5K2 1190 aa11.18□□□□□ -0.62
TOM1L1-203ENST00000536554 PUS7Q96PZ0 661 aaKnown RBP11.18□□□□□ -0.62
TOM1L1-203ENST00000536554 DLC1Q96QB1 1528 aa11.17□□□□□ -0.62
TOM1L1-203ENST00000536554 AMOTL2Q9Y2J4 779 aa11.17□□□□□ -0.62
TOM1L1-203ENST00000536554 NCKAP5LQ9HCH0 1330 aa11.17□□□□□ -0.62
TOM1L1-203ENST00000536554 SAFB2Q14151 953 aaKnown RBP eCLIP11.16□□□□□ -0.62
TOM1L1-203ENST00000536554 DCBLD2Q96PD2 775 aa11.16□□□□□ -0.62
TOM1L1-203ENST00000536554 TECPR2O15040 1411 aa11.16□□□□□ -0.62
TOM1L1-203ENST00000536554 FAM135BQ49AJ0 1406 aa11.16□□□□□ -0.62
TOM1L1-203ENST00000536554 POLR1AO95602 1720 aaPredicted RBP11.16□□□□□ -0.62
TOM1L1-203ENST00000536554 EVC2Q86UK5 1308 aa11.16□□□□□ -0.62
TOM1L1-203ENST00000536554 PIK3R4Q99570 1358 aa11.16□□□□□ -0.62
TOM1L1-203ENST00000536554 PTPRUQ92729 1446 aa11.15□□□□□ -0.62
TOM1L1-203ENST00000536554 NPHP4O75161 1426 aaPredicted RBP11.15□□□□□ -0.63
TOM1L1-203ENST00000536554 GSE1Q14687 1217 aa11.14□□□□□ -0.63
TOM1L1-203ENST00000536554 ARHGEF28Q8N1W1 1705 aaKnown RBP11.14□□□□□ -0.63
TOM1L1-203ENST00000536554 PLEKHH1Q9ULM0 1364 aa11.14□□□□□ -0.63
TOM1L1-203ENST00000536554 DIP2AQ14689 1571 aa11.14□□□□□ -0.63
TOM1L1-203ENST00000536554 PER1O15534 1290 aaPredicted RBP11.14□□□□□ -0.63
TOM1L1-203ENST00000536554 DCAF8Q5TAQ9 597 aa11.14□□□□□ -0.63
TOM1L1-203ENST00000536554 MINK1Q8N4C8 1332 aaPredicted RBP11.13□□□□□ -0.63
TOM1L1-203ENST00000536554 ROBO2Q9HCK4 1378 aa11.13□□□□□ -0.63
TOM1L1-203ENST00000536554 ANP32CO43423 234 aa11.13□□□□□ -0.63
TOM1L1-203ENST00000536554 HSPA2P54652 639 aa11.13□□□□□ -0.63
TOM1L1-203ENST00000536554 RASEFQ8IZ41 740 aa11.13□□□□□ -0.63
TOM1L1-203ENST00000536554 FAM212AQ96EL1 285 aa11.13□□□□□ -0.63
TOM1L1-203ENST00000536554 PANK3Q9H999 370 aa11.13□□□□□ -0.63
TOM1L1-203ENST00000536554 CDK19Q9BWU1 502 aa11.12□□□□□ -0.63
TOM1L1-203ENST00000536554 FARP1Q9Y4F1 1045 aaPredicted RBP11.12□□□□□ -0.63
TOM1L1-203ENST00000536554 QRICH2Q9H0J4 1663 aa11.11□□□□□ -0.63
TOM1L1-203ENST00000536554 KCNA6P17658 529 aa11.11□□□□□ -0.63
TOM1L1-203ENST00000536554 CABP2Q9NPB3 220 aa11.11□□□□□ -0.63
TOM1L1-203ENST00000536554 LMTK3Q96Q04 1460 aa11.11□□□□□ -0.63
TOM1L1-203ENST00000536554 WASLO00401 505 aaPredicted RBP11.1□□□□□ -0.63
TOM1L1-203ENST00000536554 RGL2O15211 777 aa11.1□□□□□ -0.63
TOM1L1-203ENST00000536554 CPS1P31327 1500 aa11.1□□□□□ -0.63
TOM1L1-203ENST00000536554 SRPK2P78362 688 aaKnown RBP11.09□□□□□ -0.63
TOM1L1-203ENST00000536554 SLC12A5Q9H2X9 1139 aa11.09□□□□□ -0.63
TOM1L1-203ENST00000536554 TULP4Q9NRJ4 1543 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms