RNA–Protein interactions for RNA: ENST00000536376.5

ATP2A1-203, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 2 BASIC

Gene ATP2A1, Length 3,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-203ENST00000536376 U2AF1Q01081 240 aaKnown RBP eCLIP15.15■□□□□ 0.02
ATP2A1-203ENST00000536376 ERVK-7P63135 1459 aa15.14■□□□□ 0.01
ATP2A1-203ENST00000536376 NSD3Q9BZ95 1437 aa15.14■□□□□ 0.01
ATP2A1-203ENST00000536376 FOXD4L1Q9NU39 408 aa15.14■□□□□ 0.01
ATP2A1-203ENST00000536376 ITPRIPQ8IWB1 547 aa15.13■□□□□ 0.01
ATP2A1-203ENST00000536376 PNNQ9H307 717 aaKnown RBP15.13■□□□□ 0.01
ATP2A1-203ENST00000536376 NINLQ9Y2I6 1382 aa15.13■□□□□ 0.01
ATP2A1-203ENST00000536376 MVPQ14764 893 aaKnown RBP15.12■□□□□ 0.01
ATP2A1-203ENST00000536376 TMEM132EQ6IEE7 984 aa15.12■□□□□ 0.01
ATP2A1-203ENST00000536376 SMC4Q9NTJ3 1288 aa15.12■□□□□ 0.01
ATP2A1-203ENST00000536376 KDM5AP29375 1690 aaKnown RBP15.12■□□□□ 0.01
ATP2A1-203ENST00000536376 UGGT1Q9NYU2 1555 aa15.12■□□□□ 0.01
ATP2A1-203ENST00000536376 DZIP1LQ8IYY4 767 aaKnown RBP15.12■□□□□ 0.01
ATP2A1-203ENST00000536376 PLXNC1O60486 1568 aa15.11■□□□□ 0.01
ATP2A1-203ENST00000536376 POLR3AO14802 1390 aaPredicted RBP15.11■□□□□ 0.01
ATP2A1-203ENST00000536376 ZKSCAN2Q63HK3 967 aa15.11■□□□□ 0.01
ATP2A1-203ENST00000536376 CHMP5Q9NZZ3 219 aa15.11■□□□□ 0.01
ATP2A1-203ENST00000536376 SCAPERQ9BY12 1400 aa15.11■□□□□ 0.01
ATP2A1-203ENST00000536376 NUTM2DQ5VT03 806 aaPredicted RBP15.1■□□□□ 0.01
ATP2A1-203ENST00000536376 CLTCL1P53675 1640 aa15.1■□□□□ 0.01
ATP2A1-203ENST00000536376 U2SURPO15042 1029 aaKnown RBP15.1■□□□□ 0.01
ATP2A1-203ENST00000536376 HSCBQ8IWL3 235 aa15.1■□□□□ 0.01
ATP2A1-203ENST00000536376 NGEFQ8N5V2 710 aa15.1■□□□□ 0.01
ATP2A1-203ENST00000536376 SAFB2Q14151 953 aaKnown RBP eCLIP15.1■□□□□ 0.01
ATP2A1-203ENST00000536376 EXOSC9Q06265 439 aaKnown RBP15.09■□□□□ 0.01
ATP2A1-203ENST00000536376 FSD2A1L4K1 749 aa15.09■□□□□ 0.01
ATP2A1-203ENST00000536376 MYH16Q9H6N6 1097 aa15.08■□□□□ 0.01
ATP2A1-203ENST00000536376 CEP152O94986 1710 aa15.08■□□□□ 0
ATP2A1-203ENST00000536376 WDR63Q8IWG1 891 aa15.08■□□□□ 0
ATP2A1-203ENST00000536376 TRIM27P14373 513 aa15.08■□□□□ 0
ATP2A1-203ENST00000536376 CFAP53Q96M91 514 aa15.08■□□□□ 0
ATP2A1-203ENST00000536376 SPHKAPQ2M3C7 1700 aa15.07■□□□□ 0
ATP2A1-203ENST00000536376 LNPKQ9C0E8 428 aa15.07■□□□□ 0
ATP2A1-203ENST00000536376 TRPM2O94759 1503 aa15.06■□□□□ 0
ATP2A1-203ENST00000536376 SSH1Q8WYL5 1049 aa15.06■□□□□ 0
ATP2A1-203ENST00000536376 GRPEL1Q9HAV7 217 aa15.06■□□□□ 0
ATP2A1-203ENST00000536376 NOB1Q9ULX3 412 aaKnown RBP15.05■□□□□ -0
ATP2A1-203ENST00000536376 HSP90AA1P07900 732 aaKnown RBP15.05■□□□□ -0
ATP2A1-203ENST00000536376 PLCH2O75038 1416 aa15.04■□□□□ -0
ATP2A1-203ENST00000536376 HSP90AB1P08238 724 aaKnown RBP15.04■□□□□ -0
ATP2A1-203ENST00000536376 MRE11P49959 708 aa15.04■□□□□ -0
ATP2A1-203ENST00000536376 TMEM57Q8N5G2 664 aa15.04■□□□□ -0
ATP2A1-203ENST00000536376 PHF23Q9BUL5 403 aaPredicted RBP15.04■□□□□ -0
ATP2A1-203ENST00000536376 KANK1Q14678 1352 aa15.04■□□□□ -0
ATP2A1-203ENST00000536376 ERBB4Q15303 1308 aa15.03■□□□□ -0
ATP2A1-203ENST00000536376 RTEL1-TNFRSF6BF6WH68 1400 aa15.03■□□□□ -0
ATP2A1-203ENST00000536376 ERCC6L2Q5T890 1561 aa15.03■□□□□ -0
ATP2A1-203ENST00000536376 CLCN1P35523 988 aa15.03■□□□□ -0
ATP2A1-203ENST00000536376 STAC3Q96MF2 364 aa15.03■□□□□ -0
ATP2A1-203ENST00000536376 PTPRTO14522 1441 aa15.03■□□□□ -0
ATP2A1-203ENST00000536376 AAMPQ13685 434 aa15.02■□□□□ -0
ATP2A1-203ENST00000536376 TNPO1Q92973 898 aaKnown RBP15.02■□□□□ -0
ATP2A1-203ENST00000536376 GAS2L3Q86XJ1 694 aa15.02□□□□□ -0.01
ATP2A1-203ENST00000536376 ATF7IPQ6VMQ6 1270 aa15.01□□□□□ -0.01
ATP2A1-203ENST00000536376 TRIM44Q96DX7 344 aaPredicted RBP15.01□□□□□ -0.01
ATP2A1-203ENST00000536376 C1orf115Q9H7X2 142 aa15.01□□□□□ -0.01
ATP2A1-203ENST00000536376 CABP2Q9NPB3 220 aa15.01□□□□□ -0.01
ATP2A1-203ENST00000536376 SHPRHQ149N8 1683 aa15.01□□□□□ -0.01
ATP2A1-203ENST00000536376 IQSEC2Q5JU85 1478 aa15.01□□□□□ -0.01
ATP2A1-203ENST00000536376 DDX11L8A8MPP1 907 aa15.01□□□□□ -0.01
ATP2A1-203ENST00000536376 ZNF692Q9BU19 519 aaPredicted RBP15.01□□□□□ -0.01
ATP2A1-203ENST00000536376 ABCA6Q8N139 1617 aa15□□□□□ -0.01
ATP2A1-203ENST00000536376 NOS1P29475 1434 aa15□□□□□ -0.01
ATP2A1-203ENST00000536376 VSIG10Q8N0Z9 540 aa15□□□□□ -0.01
ATP2A1-203ENST00000536376 RBM42Q9BTD8 480 aaKnown RBP15□□□□□ -0.01
ATP2A1-203ENST00000536376 GGNBP2Q9H3C7 697 aa15□□□□□ -0.01
ATP2A1-203ENST00000536376 DDX19BQ9UMR2 479 aa15□□□□□ -0.01
ATP2A1-203ENST00000536376 ESPNB1AK53 854 aa15□□□□□ -0.01
ATP2A1-203ENST00000536376 PLEKHG5O94827 1062 aa14.99□□□□□ -0.01
ATP2A1-203ENST00000536376 CD2BP2O95400 341 aaKnown RBP14.99□□□□□ -0.01
ATP2A1-203ENST00000536376 HSP90AA2PQ14568 343 aaPredicted RBP14.99□□□□□ -0.01
ATP2A1-203ENST00000536376 ABCC1P33527 1531 aa14.98□□□□□ -0.01
ATP2A1-203ENST00000536376 CCDC27Q2M243 656 aa14.98□□□□□ -0.01
ATP2A1-203ENST00000536376 HDAC1Q13547 482 aaPredicted RBP14.98□□□□□ -0.01
ATP2A1-203ENST00000536376 ZNF518AQ6AHZ1 1483 aa14.97□□□□□ -0.01
ATP2A1-203ENST00000536376 TMPOP42166 694 aaKnown RBP14.97□□□□□ -0.01
ATP2A1-203ENST00000536376 ANKRD45Q5TZF3 282 aa14.97□□□□□ -0.01
ATP2A1-203ENST00000536376 RIPK4P57078 832 aa14.97□□□□□ -0.01
ATP2A1-203ENST00000536376 TRIM35Q9UPQ4 493 aa14.97□□□□□ -0.01
ATP2A1-203ENST00000536376 MAP3K4Q9Y6R4 1608 aa14.96□□□□□ -0.01
ATP2A1-203ENST00000536376 SMC5Q8IY18 1101 aa14.96□□□□□ -0.01
ATP2A1-203ENST00000536376 STK26Q9P289 416 aa14.96□□□□□ -0.01
ATP2A1-203ENST00000536376 ELL2O00472 640 aaPredicted RBP14.96□□□□□ -0.02
ATP2A1-203ENST00000536376 ZBTB40Q9NUA8 1239 aa14.95□□□□□ -0.02
ATP2A1-203ENST00000536376 GGT6Q6P531 493 aa14.95□□□□□ -0.02
ATP2A1-203ENST00000536376 CHD1LQ86WJ1 897 aa14.95□□□□□ -0.02
ATP2A1-203ENST00000536376 ZMYM3Q14202 1370 aa14.94□□□□□ -0.02
ATP2A1-203ENST00000536376 CFAP65Q6ZU64 1925 aaKnown RBP14.94□□□□□ -0.02
ATP2A1-203ENST00000536376 SSFA2P28290 1259 aa14.94□□□□□ -0.02
ATP2A1-203ENST00000536376 GBP4Q96PP9 640 aa14.94□□□□□ -0.02
ATP2A1-203ENST00000536376 ZFYVE16Q7Z3T8 1539 aa14.94□□□□□ -0.02
ATP2A1-203ENST00000536376 FBLN1P23142 703 aa14.94□□□□□ -0.02
ATP2A1-203ENST00000536376 NUCB1Q02818 461 aa14.93□□□□□ -0.02
ATP2A1-203ENST00000536376 GLIPR1L2Q4G1C9 344 aa14.93□□□□□ -0.02
ATP2A1-203ENST00000536376 SRPK2P78362 688 aaKnown RBP14.93□□□□□ -0.02
ATP2A1-203ENST00000536376 CD109Q6YHK3 1445 aa14.93□□□□□ -0.02
ATP2A1-203ENST00000536376 NCLP19338 710 aaKnown RBP14.92□□□□□ -0.02
ATP2A1-203ENST00000536376 THUMPD2Q9BTF0 503 aaKnown RBP14.92□□□□□ -0.02
ATP2A1-203ENST00000536376 RBM25P49756 843 aaKnown RBP14.92□□□□□ -0.02
ATP2A1-203ENST00000536376 DDIT3P35638 169 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms