RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 GJD4Q96KN9 370 aaPredicted RBP8.16□□□□□ -1.1
CHD4-205ENST00000536301 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.15□□□□□ -1.1
CHD4-205ENST00000536301 PXDNQ92626 1479 aa8.15□□□□□ -1.1
CHD4-205ENST00000536301 BLMP54132 1417 aaPredicted RBP8.15□□□□□ -1.1
CHD4-205ENST00000536301 NUP155O75694 1391 aa8.15□□□□□ -1.1
CHD4-205ENST00000536301 PSDA5PKW4 1024 aaPredicted RBP8.15□□□□□ -1.1
CHD4-205ENST00000536301 ZNF326Q5BKZ1 582 aaKnown RBP8.15□□□□□ -1.1
CHD4-205ENST00000536301 CCDC125Q86Z20 511 aa8.14□□□□□ -1.11
CHD4-205ENST00000536301 SLIT2O94813 1529 aa8.13□□□□□ -1.11
CHD4-205ENST00000536301 NUTM2FA1L443 756 aa8.12□□□□□ -1.11
CHD4-205ENST00000536301 APLP2Q06481 763 aa8.12□□□□□ -1.11
CHD4-205ENST00000536301 FOXD1Q16676 465 aa8.12□□□□□ -1.11
CHD4-205ENST00000536301 KIF1BO60333 1816 aa8.11□□□□□ -1.11
CHD4-205ENST00000536301 FOXO3O43524 673 aa8.11□□□□□ -1.11
CHD4-205ENST00000536301 HRCP23327 699 aa8.11□□□□□ -1.11
CHD4-205ENST00000536301 ESCO1Q5FWF5 840 aa8.11□□□□□ -1.11
CHD4-205ENST00000536301 UNC5CLQ8IV45 518 aa8.11□□□□□ -1.11
CHD4-205ENST00000536301 SEPT12Q8IYM1 358 aa8.11□□□□□ -1.11
CHD4-205ENST00000536301 USP32Q8NFA0 1604 aa8.11□□□□□ -1.11
CHD4-205ENST00000536301 PLEKHG5O94827 1062 aa8.1□□□□□ -1.11
CHD4-205ENST00000536301 PLCH1Q4KWH8 1693 aa8.1□□□□□ -1.11
CHD4-205ENST00000536301 PRAG1Q86YV5 1406 aa8.1□□□□□ -1.11
CHD4-205ENST00000536301 CDC42BPGQ6DT37 1551 aa8.1□□□□□ -1.11
CHD4-205ENST00000536301 ROCK1Q13464 1354 aa8.1□□□□□ -1.11
CHD4-205ENST00000536301 NPHP3Q7Z494 1330 aa8.09□□□□□ -1.11
CHD4-205ENST00000536301 ITGAEP38570 1179 aa8.09□□□□□ -1.11
CHD4-205ENST00000536301 RGPD8O14715 1765 aaPredicted RBP8.09□□□□□ -1.11
CHD4-205ENST00000536301 ABCA3Q99758 1704 aa8.09□□□□□ -1.11
CHD4-205ENST00000536301 CABLES1Q8TDN4 633 aa8.08□□□□□ -1.12
CHD4-205ENST00000536301 HFM1A2PYH4 1435 aa8.08□□□□□ -1.12
CHD4-205ENST00000536301 NAIPQ13075 1403 aa8.08□□□□□ -1.12
CHD4-205ENST00000536301 PLEKHH1Q9ULM0 1364 aa8.08□□□□□ -1.12
CHD4-205ENST00000536301 PPLO60437 1756 aa8.07□□□□□ -1.12
CHD4-205ENST00000536301 SPATA31A3Q5VYP0 1347 aa8.07□□□□□ -1.12
CHD4-205ENST00000536301 EN1Q05925 392 aaPredicted RBP8.07□□□□□ -1.12
CHD4-205ENST00000536301 SF3B2Q13435 895 aaKnown RBP8.07□□□□□ -1.12
CHD4-205ENST00000536301 FAM182BQ5T319 152 aa8.07□□□□□ -1.12
CHD4-205ENST00000536301 KRT27Q7Z3Y8 459 aa8.07□□□□□ -1.12
CHD4-205ENST00000536301 WAPLQ7Z5K2 1190 aa8.07□□□□□ -1.12
CHD4-205ENST00000536301 NRAPQ86VF7 1730 aa8.06□□□□□ -1.12
CHD4-205ENST00000536301 FMN2Q9NZ56 1722 aa8.06□□□□□ -1.12
CHD4-205ENST00000536301 R3HDM1Q15032 1099 aaKnown RBP8.06□□□□□ -1.12
CHD4-205ENST00000536301 VPS72Q15906 364 aa8.06□□□□□ -1.12
CHD4-205ENST00000536301 TNS1Q9HBL0 1735 aaKnown RBP8.06□□□□□ -1.12
CHD4-205ENST00000536301 NWD2Q9ULI1 1742 aa8.06□□□□□ -1.12
CHD4-205ENST00000536301 ONECUT3O60422 494 aaPredicted RBP8.05□□□□□ -1.12
CHD4-205ENST00000536301 STK26Q9P289 416 aa8.05□□□□□ -1.12
CHD4-205ENST00000536301 CCDC9Q9Y3X0 531 aaKnown RBP8.05□□□□□ -1.12
CHD4-205ENST00000536301 RGPD1P0DJD0 1748 aa8.04□□□□□ -1.12
CHD4-205ENST00000536301 BAG6P46379 1132 aa8.04□□□□□ -1.12
CHD4-205ENST00000536301 FAM98CQ17RN3 349 aaKnown RBP8.04□□□□□ -1.12
CHD4-205ENST00000536301 KRT28Q7Z3Y7 464 aa8.04□□□□□ -1.12
CHD4-205ENST00000536301 ADGRF5Q8IZF2 1346 aa8.03□□□□□ -1.12
CHD4-205ENST00000536301 KIF1AQ12756 1690 aa8.03□□□□□ -1.12
CHD4-205ENST00000536301 A0A0G2JS52 829 aa8.03□□□□□ -1.12
CHD4-205ENST00000536301 FAM83GA6ND36 823 aa8.03□□□□□ -1.12
CHD4-205ENST00000536301 VGFO15240 615 aaPredicted RBP8.03□□□□□ -1.12
CHD4-205ENST00000536301 MYT1Q01538 1121 aa8.03□□□□□ -1.12
CHD4-205ENST00000536301 EZH2Q15910 746 aaKnown RBP8.03□□□□□ -1.12
CHD4-205ENST00000536301 IFT172Q9UG01 1749 aa8.03□□□□□ -1.12
CHD4-205ENST00000536301 TNS3Q68CZ2 1445 aa8.03□□□□□ -1.12
CHD4-205ENST00000536301 LRPPRCP42704 1394 aaKnown RBP8.02□□□□□ -1.13
CHD4-205ENST00000536301 YY1P25490 414 aa8.02□□□□□ -1.13
CHD4-205ENST00000536301 TMEM132EQ6IEE7 984 aa8.02□□□□□ -1.13
CHD4-205ENST00000536301 PPARGC1BQ86YN6 1023 aaKnown RBP8.02□□□□□ -1.13
CHD4-205ENST00000536301 KNDC1Q76NI1 1749 aa8.02□□□□□ -1.13
CHD4-205ENST00000536301 CCDC144AA2RUR9 1427 aa8.02□□□□□ -1.13
CHD4-205ENST00000536301 TECPR2O15040 1411 aa8.02□□□□□ -1.13
CHD4-205ENST00000536301 HAP1P54257 671 aaPredicted RBP8.01□□□□□ -1.13
CHD4-205ENST00000536301 THSD7AQ9UPZ6 1657 aa8.01□□□□□ -1.13
CHD4-205ENST00000536301 CAMTA1Q9Y6Y1 1673 aa8□□□□□ -1.13
CHD4-205ENST00000536301 LMOD2Q6P5Q4 547 aa8□□□□□ -1.13
CHD4-205ENST00000536301 PHF8Q9UPP1 1060 aa8□□□□□ -1.13
CHD4-205ENST00000536301 DISP2A7MBM2 1401 aa8□□□□□ -1.13
CHD4-205ENST00000536301 TRPM3Q9HCF6 1732 aaPredicted RBP8□□□□□ -1.13
CHD4-205ENST00000536301 NUP188Q5SRE5 1749 aa7.99□□□□□ -1.13
CHD4-205ENST00000536301 CAMKK2Q96RR4 588 aa7.99□□□□□ -1.13
CHD4-205ENST00000536301 BTG4Q9NY30 223 aa7.99□□□□□ -1.13
CHD4-205ENST00000536301 RRBP1Q9P2E9 1410 aaKnown RBP7.99□□□□□ -1.13
CHD4-205ENST00000536301 NRXN1Q9ULB1 1477 aa7.99□□□□□ -1.13
CHD4-205ENST00000536301 RPGRIP1LQ68CZ1 1315 aa7.99□□□□□ -1.13
CHD4-205ENST00000536301 RREB1Q92766 1687 aa7.98□□□□□ -1.13
CHD4-205ENST00000536301 SBNO1A3KN83 1393 aa7.98□□□□□ -1.13
CHD4-205ENST00000536301 ABCC11Q96J66 1382 aa7.98□□□□□ -1.13
CHD4-205ENST00000536301 CRYBG1Q9Y4K1 1723 aa7.98□□□□□ -1.13
CHD4-205ENST00000536301 COL14A1Q05707 1796 aaKnown RBP7.98□□□□□ -1.13
CHD4-205ENST00000536301 TRIM37O94972 964 aa7.98□□□□□ -1.13
CHD4-205ENST00000536301 PMFBP1Q8TBY8 1022 aa7.98□□□□□ -1.13
CHD4-205ENST00000536301 ALS2Q96Q42 1657 aa7.98□□□□□ -1.13
CHD4-205ENST00000536301 SPATA31A5Q5VU36 1347 aa7.98□□□□□ -1.13
CHD4-205ENST00000536301 SPATA31A7Q8IWB4 1347 aa7.98□□□□□ -1.13
CHD4-205ENST00000536301 YTHDC2Q9H6S0 1430 aaKnown RBP7.97□□□□□ -1.13
CHD4-205ENST00000536301 SAFB2Q14151 953 aaKnown RBP eCLIP7.97□□□□□ -1.13
CHD4-205ENST00000536301 RGL3Q3MIN7 710 aa7.97□□□□□ -1.13
CHD4-205ENST00000536301 SPATA31E1Q6ZUB1 1445 aa7.96□□□□□ -1.13
CHD4-205ENST00000536301 UTRNP46939 3433 aa7.96□□□□□ -1.14
CHD4-205ENST00000536301 ARHGEF10O15013 1369 aa7.96□□□□□ -1.14
CHD4-205ENST00000536301 PIK3C2GO75747 1445 aa7.95□□□□□ -1.14
CHD4-205ENST00000536301 APBA3O96018 575 aa7.95□□□□□ -1.14
CHD4-205ENST00000536301 PSME1Q06323 249 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms