RNA–Protein interactions for RNA: ENST00000535731.1

LRP6-202, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-202ENST00000535731 HFM1A2PYH4 1435 aa29.7■■■□□ 2.34
LRP6-202ENST00000535731 MYOM2P54296 1465 aa29.69■■■□□ 2.34
LRP6-202ENST00000535731 CLTCL1P53675 1640 aa29.69■■■□□ 2.34
LRP6-202ENST00000535731 COL22A1Q8NFW1 1626 aaPredicted RBP29.69■■■□□ 2.34
LRP6-202ENST00000535731 PRAG1Q86YV5 1406 aa29.69■■■□□ 2.34
LRP6-202ENST00000535731 RPGRIP1LQ68CZ1 1315 aa29.69■■■□□ 2.34
LRP6-202ENST00000535731 FOXO3O43524 673 aa29.66■■■□□ 2.34
LRP6-202ENST00000535731 UNC5CLQ8IV45 518 aa29.62■■■□□ 2.33
LRP6-202ENST00000535731 LRPPRCP42704 1394 aaKnown RBP29.62■■■□□ 2.33
LRP6-202ENST00000535731 KIF1BO60333 1816 aa29.61■■■□□ 2.33
LRP6-202ENST00000535731 XPCQ01831 940 aaPredicted RBP29.61■■■□□ 2.33
LRP6-202ENST00000535731 PXDNQ92626 1479 aa29.61■■■□□ 2.33
LRP6-202ENST00000535731 EP400Q96L91 3159 aa29.6■■■□□ 2.33
LRP6-202ENST00000535731 BLMP54132 1417 aaPredicted RBP29.58■■■□□ 2.33
LRP6-202ENST00000535731 SF3B2Q13435 895 aaKnown RBP29.54■■■□□ 2.32
LRP6-202ENST00000535731 NUTM2FA1L443 756 aa29.53■■■□□ 2.32
LRP6-202ENST00000535731 RALGAPBQ86X10 1494 aa29.53■■■□□ 2.32
LRP6-202ENST00000535731 CDC42BPGQ6DT37 1551 aa29.52■■■□□ 2.32
LRP6-202ENST00000535731 SLIT2O94813 1529 aa29.52■■■□□ 2.32
LRP6-202ENST00000535731 DEFB132Q7Z7B7 95 aa29.52■■■□□ 2.32
LRP6-202ENST00000535731 MARF1Q9Y4F3 1742 aaKnown RBP29.51■■■□□ 2.32
LRP6-202ENST00000535731 SPATA31A3Q5VYP0 1347 aa29.51■■■□□ 2.32
LRP6-202ENST00000535731 NAIPQ13075 1403 aa29.51■■■□□ 2.31
LRP6-202ENST00000535731 WAPLQ7Z5K2 1190 aa29.5■■■□□ 2.31
LRP6-202ENST00000535731 PPARGC1BQ86YN6 1023 aaKnown RBP29.49■■■□□ 2.31
LRP6-202ENST00000535731 SEPT12Q8IYM1 358 aa29.49■■■□□ 2.31
LRP6-202ENST00000535731 STK26Q9P289 416 aa29.48■■■□□ 2.31
LRP6-202ENST00000535731 GLI3P10071 1580 aa29.47■■■□□ 2.31
LRP6-202ENST00000535731 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.46■■■□□ 2.31
LRP6-202ENST00000535731 KRT28Q7Z3Y7 464 aa29.46■■■□□ 2.31
LRP6-202ENST00000535731 ONECUT3O60422 494 aaPredicted RBP29.45■■■□□ 2.31
LRP6-202ENST00000535731 SLC4A1APQ9BWU0 796 aaKnown RBP29.45■■■□□ 2.31
LRP6-202ENST00000535731 VPS72Q15906 364 aa29.44■■■□□ 2.3
LRP6-202ENST00000535731 ADGRF5Q8IZF2 1346 aa29.44■■■□□ 2.3
LRP6-202ENST00000535731 HAP1P54257 671 aaPredicted RBP29.42■■■□□ 2.3
LRP6-202ENST00000535731 TECPR2O15040 1411 aa29.42■■■□□ 2.3
LRP6-202ENST00000535731 ABCC11Q96J66 1382 aa29.41■■■□□ 2.3
LRP6-202ENST00000535731 PPLO60437 1756 aa29.41■■■□□ 2.3
LRP6-202ENST00000535731 CCDC144AA2RUR9 1427 aa29.4■■■□□ 2.3
LRP6-202ENST00000535731 PSME1Q06323 249 aa29.4■■■□□ 2.3
LRP6-202ENST00000535731 KRT27Q7Z3Y8 459 aa29.4■■■□□ 2.3
LRP6-202ENST00000535731 CCDC9Q9Y3X0 531 aaKnown RBP29.38■■■□□ 2.29
LRP6-202ENST00000535731 TMEM132EQ6IEE7 984 aa29.37■■■□□ 2.29
LRP6-202ENST00000535731 PLEKHH1Q9ULM0 1364 aa29.37■■■□□ 2.29
LRP6-202ENST00000535731 RGL3Q3MIN7 710 aa29.36■■■□□ 2.29
LRP6-202ENST00000535731 CABLES1Q8TDN4 633 aa29.35■■■□□ 2.29
LRP6-202ENST00000535731 RRBP1Q9P2E9 1410 aaKnown RBP29.35■■■□□ 2.29
LRP6-202ENST00000535731 BRWD3Q6RI45 1802 aa29.34■■■□□ 2.29
LRP6-202ENST00000535731 SIRT1Q96EB6 747 aa29.34■■■□□ 2.29
LRP6-202ENST00000535731 PHF8Q9UPP1 1060 aa29.34■■■□□ 2.29
LRP6-202ENST00000535731 USP32Q8NFA0 1604 aa29.34■■■□□ 2.29
LRP6-202ENST00000535731 BAG6P46379 1132 aa29.33■■■□□ 2.29
LRP6-202ENST00000535731 ANKRD30BQ9BXX2 1392 aa29.32■■■□□ 2.28
LRP6-202ENST00000535731 TNS3Q68CZ2 1445 aa29.31■■■□□ 2.28
LRP6-202ENST00000535731 LRP5O75197 1615 aa29.31■■■□□ 2.28
LRP6-202ENST00000535731 PSDA5PKW4 1024 aaPredicted RBP29.3■■■□□ 2.28
LRP6-202ENST00000535731 HRCP23327 699 aa29.3■■■□□ 2.28
LRP6-202ENST00000535731 KIF1AQ12756 1690 aa29.3■■■□□ 2.28
LRP6-202ENST00000535731 PLEKHG5O94827 1062 aa29.29■■■□□ 2.28
LRP6-202ENST00000535731 LMOD2Q6P5Q4 547 aa29.29■■■□□ 2.28
LRP6-202ENST00000535731 FAM83GA6ND36 823 aa29.28■■■□□ 2.28
LRP6-202ENST00000535731 FMN2Q9NZ56 1722 aa29.28■■■□□ 2.28
LRP6-202ENST00000535731 SBNO1A3KN83 1393 aa29.27■■■□□ 2.28
LRP6-202ENST00000535731 A0A0G2JS52 829 aa29.26■■■□□ 2.27
LRP6-202ENST00000535731 MYT1Q01538 1121 aa29.26■■■□□ 2.27
LRP6-202ENST00000535731 YTHDC2Q9H6S0 1430 aaKnown RBP29.26■■■□□ 2.27
LRP6-202ENST00000535731 ARHGEF10O15013 1369 aa29.25■■■□□ 2.27
LRP6-202ENST00000535731 SPATA31E1Q6ZUB1 1445 aa29.23■■■□□ 2.27
LRP6-202ENST00000535731 NWD2Q9ULI1 1742 aa29.23■■■□□ 2.27
LRP6-202ENST00000535731 FAM98CQ17RN3 349 aaKnown RBP29.22■■■□□ 2.27
LRP6-202ENST00000535731 KNDC1Q76NI1 1749 aa29.22■■■□□ 2.27
LRP6-202ENST00000535731 PIK3C2GO75747 1445 aa29.2■■■□□ 2.27
LRP6-202ENST00000535731 EN1Q05925 392 aaPredicted RBP29.2■■■□□ 2.26
LRP6-202ENST00000535731 C14orf93Q9H972 538 aaKnown RBP29.2■■■□□ 2.26
LRP6-202ENST00000535731 NRXN1Q9ULB1 1477 aa29.19■■■□□ 2.26
LRP6-202ENST00000535731 BTG4Q9NY30 223 aa29.18■■■□□ 2.26
LRP6-202ENST00000535731 PLCH1Q4KWH8 1693 aa29.18■■■□□ 2.26
LRP6-202ENST00000535731 PMFBP1Q8TBY8 1022 aa29.16■■■□□ 2.26
LRP6-202ENST00000535731 DHX57Q6P158 1386 aaKnown RBP29.15■■■□□ 2.26
LRP6-202ENST00000535731 R3HDM1Q15032 1099 aaKnown RBP29.14■■■□□ 2.26
LRP6-202ENST00000535731 PRAM1Q96QH2 718 aa29.13■■■□□ 2.25
LRP6-202ENST00000535731 RGPD8O14715 1765 aaPredicted RBP29.12■■■□□ 2.25
LRP6-202ENST00000535731 SAFB2Q14151 953 aaKnown RBP eCLIP29.12■■■□□ 2.25
LRP6-202ENST00000535731 MPHOSPH9Q99550 1183 aa29.12■■■□□ 2.25
LRP6-202ENST00000535731 CFAP70Q5T0N1 1121 aa29.11■■■□□ 2.25
LRP6-202ENST00000535731 IFT172Q9UG01 1749 aa29.11■■■□□ 2.25
LRP6-202ENST00000535731 FAM182BQ5T319 152 aa29.1■■■□□ 2.25
LRP6-202ENST00000535731 POGKQ9P215 609 aa29.09■■■□□ 2.25
LRP6-202ENST00000535731 SPATA31A5Q5VU36 1347 aa29.09■■■□□ 2.25
LRP6-202ENST00000535731 SPATA31A7Q8IWB4 1347 aa29.09■■■□□ 2.25
LRP6-202ENST00000535731 ANKARQ7Z5J8 1434 aa29.08■■■□□ 2.25
LRP6-202ENST00000535731 ABCA3Q99758 1704 aa29.07■■■□□ 2.24
LRP6-202ENST00000535731 DISP2A7MBM2 1401 aa29.06■■■□□ 2.24
LRP6-202ENST00000535731 GPRASP1Q5JY77 1395 aa29.05■■■□□ 2.24
LRP6-202ENST00000535731 EZH2Q15910 746 aaKnown RBP29.05■■■□□ 2.24
LRP6-202ENST00000535731 NRAPQ86VF7 1730 aa29.03■■■□□ 2.24
LRP6-202ENST00000535731 CAMKK2Q96RR4 588 aa29.02■■■□□ 2.24
LRP6-202ENST00000535731 RGPD1P0DJD0 1748 aa29.02■■■□□ 2.24
LRP6-202ENST00000535731 COL14A1Q05707 1796 aaKnown RBP29.01■■■□□ 2.23
LRP6-202ENST00000535731 FAM196AQ6ZSG2 479 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms