RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 TRAK1Q9UPV9 953 aa29.37■■■□□ 2.29
CHFR-209ENST00000535181 CDC42BPGQ6DT37 1551 aa29.37■■■□□ 2.29
CHFR-209ENST00000535181 ROCK2O75116 1388 aaKnown RBP29.37■■■□□ 2.29
CHFR-209ENST00000535181 PRAM1Q96QH2 718 aa29.35■■■□□ 2.29
CHFR-209ENST00000535181 ATF3P18847 181 aa29.34■■■□□ 2.29
CHFR-209ENST00000535181 ADGRB2O60241 1585 aa29.31■■■□□ 2.28
CHFR-209ENST00000535181 POGKQ9P215 609 aa29.31■■■□□ 2.28
CHFR-209ENST00000535181 SLAIN2Q9P270 581 aa29.29■■■□□ 2.28
CHFR-209ENST00000535181 MST1RQ04912 1400 aa29.28■■■□□ 2.28
CHFR-209ENST00000535181 ILDR1Q86SU0 546 aaPredicted RBP29.25■■■□□ 2.27
CHFR-209ENST00000535181 PIP4K2BP78356 416 aa29.24■■■□□ 2.27
CHFR-209ENST00000535181 EIF3AQ14152 1382 aaKnown RBP29.24■■■□□ 2.27
CHFR-209ENST00000535181 FMN2Q9NZ56 1722 aa29.23■■■□□ 2.27
CHFR-209ENST00000535181 CARD11Q9BXL7 1154 aa29.23■■■□□ 2.27
CHFR-209ENST00000535181 ROBO1Q9Y6N7 1651 aa29.23■■■□□ 2.27
CHFR-209ENST00000535181 SAFB2Q14151 953 aaKnown RBP eCLIP29.22■■■□□ 2.27
CHFR-209ENST00000535181 C1orf167Q5SNV9 1468 aa29.21■■■□□ 2.27
CHFR-209ENST00000535181 CENPJQ9HC77 1338 aaPredicted RBP29.2■■■□□ 2.27
CHFR-209ENST00000535181 SCAF1Q9H7N4 1312 aaKnown RBP29.2■■■□□ 2.26
CHFR-209ENST00000535181 QRICH2Q9H0J4 1663 aa29.19■■■□□ 2.26
CHFR-209ENST00000535181 MINK1Q8N4C8 1332 aaPredicted RBP29.17■■■□□ 2.26
CHFR-209ENST00000535181 ANKARQ7Z5J8 1434 aa29.14■■■□□ 2.26
CHFR-209ENST00000535181 SBNO2Q9Y2G9 1366 aa29.13■■■□□ 2.25
CHFR-209ENST00000535181 BRINP3Q76B58 766 aa29.13■■■□□ 2.25
CHFR-209ENST00000535181 TULP4Q9NRJ4 1543 aa29.12■■■□□ 2.25
CHFR-209ENST00000535181 WASLO00401 505 aaPredicted RBP29.12■■■□□ 2.25
CHFR-209ENST00000535181 HIRIP3Q9BW71 556 aaPredicted RBP29.12■■■□□ 2.25
CHFR-209ENST00000535181 AHDC1Q5TGY3 1603 aaPredicted RBP29.11■■■□□ 2.25
CHFR-209ENST00000535181 USP32Q8NFA0 1604 aa29.09■■■□□ 2.25
CHFR-209ENST00000535181 NHSL1Q5SYE7 1610 aa29.09■■■□□ 2.25
CHFR-209ENST00000535181 KIF1AQ12756 1690 aa29.06■■■□□ 2.24
CHFR-209ENST00000535181 HSPA1LP34931 641 aa29.06■■■□□ 2.24
CHFR-209ENST00000535181 USP47Q96K76 1375 aa29.05■■■□□ 2.24
CHFR-209ENST00000535181 ORAI2Q96SN7 254 aa29.05■■■□□ 2.24
CHFR-209ENST00000535181 RGPD8O14715 1765 aaPredicted RBP29.05■■■□□ 2.24
CHFR-209ENST00000535181 ATP7BP35670 1465 aa29.04■■■□□ 2.24
CHFR-209ENST00000535181 PHLPP1O60346 1717 aa29.03■■■□□ 2.24
CHFR-209ENST00000535181 NUTM2FA1L443 756 aa29.03■■■□□ 2.24
CHFR-209ENST00000535181 ESCO1Q5FWF5 840 aa29.03■■■□□ 2.24
CHFR-209ENST00000535181 CDK19Q9BWU1 502 aa29.03■■■□□ 2.24
CHFR-209ENST00000535181 ITSN1Q15811 1721 aa29.02■■■□□ 2.24
CHFR-209ENST00000535181 COL16A1Q07092 1604 aaPredicted RBP29.02■■■□□ 2.24
CHFR-209ENST00000535181 PRR36Q9H6K5 1346 aa29.01■■■□□ 2.23
CHFR-209ENST00000535181 EVC2Q86UK5 1308 aa29■■■□□ 2.23
CHFR-209ENST00000535181 TOPAZ1Q8N9V7 1692 aa28.99■■■□□ 2.23
CHFR-209ENST00000535181 SLC24A1O60721 1099 aa28.99■■■□□ 2.23
CHFR-209ENST00000535181 ST20-MTHFSA0A0A6YYL1 179 aa28.98■■■□□ 2.23
CHFR-209ENST00000535181 NUDT16Q96DE0 195 aaKnown RBP28.97■■■□□ 2.23
CHFR-209ENST00000535181 TESK2Q96S53 571 aa28.96■■■□□ 2.23
CHFR-209ENST00000535181 PHF8Q9UPP1 1060 aa28.96■■■□□ 2.23
CHFR-209ENST00000535181 NPHP3Q7Z494 1330 aa28.95■■■□□ 2.23
CHFR-209ENST00000535181 SRPK2P78362 688 aaKnown RBP28.94■■■□□ 2.22
CHFR-209ENST00000535181 SOS2Q07890 1332 aaPredicted RBP28.94■■■□□ 2.22
CHFR-209ENST00000535181 CCDC61Q9Y6R9 512 aa28.93■■■□□ 2.22
CHFR-209ENST00000535181 PXDNQ92626 1479 aa28.92■■■□□ 2.22
CHFR-209ENST00000535181 PUS7Q96PZ0 661 aaKnown RBP28.9■■■□□ 2.22
CHFR-209ENST00000535181 CABP2Q9NPB3 220 aa28.9■■■□□ 2.22
CHFR-209ENST00000535181 ATAD2Q6PL18 1390 aa28.89■■■□□ 2.22
CHFR-209ENST00000535181 FOXO3O43524 673 aa28.89■■■□□ 2.22
CHFR-209ENST00000535181 DDX17Q92841 729 aaKnown RBP28.89■■■□□ 2.22
CHFR-209ENST00000535181 EIF4G2P78344 907 aaKnown RBP eCLIP28.88■■■□□ 2.21
CHFR-209ENST00000535181 PLEKHG3A1L390 1219 aa28.87■■■□□ 2.21
CHFR-209ENST00000535181 POLR3AO14802 1390 aaPredicted RBP28.87■■■□□ 2.21
CHFR-209ENST00000535181 JCADQ9P266 1359 aa28.87■■■□□ 2.21
CHFR-209ENST00000535181 SHPRHQ149N8 1683 aa28.86■■■□□ 2.21
CHFR-209ENST00000535181 PMFBP1Q8TBY8 1022 aa28.86■■■□□ 2.21
CHFR-209ENST00000535181 LRRC59Q96AG4 307 aaKnown RBP28.86■■■□□ 2.21
CHFR-209ENST00000535181 PPIP5K1Q6PFW1 1433 aa28.86■■■□□ 2.21
CHFR-209ENST00000535181 TMF1P82094 1093 aa28.82■■■□□ 2.2
CHFR-209ENST00000535181 SBNO1A3KN83 1393 aa28.81■■■□□ 2.2
CHFR-209ENST00000535181 KRT28Q7Z3Y7 464 aa28.81■■■□□ 2.2
CHFR-209ENST00000535181 NGDNQ8NEJ9 315 aaKnown RBP28.81■■■□□ 2.2
CHFR-209ENST00000535181 DISP3Q9P2K9 1392 aa28.8■■■□□ 2.2
CHFR-209ENST00000535181 HSPA5P11021 654 aaKnown RBP28.8■■■□□ 2.2
CHFR-209ENST00000535181 PSME1Q06323 249 aa28.8■■■□□ 2.2
CHFR-209ENST00000535181 TRPM3Q9HCF6 1732 aaPredicted RBP28.8■■■□□ 2.2
CHFR-209ENST00000535181 ACEP12821 1306 aa28.79■■■□□ 2.2
CHFR-209ENST00000535181 CDCA8Q53HL2 280 aa28.78■■■□□ 2.2
CHFR-209ENST00000535181 PNPLA6Q8IY17 1366 aa28.77■■■□□ 2.2
CHFR-209ENST00000535181 COL22A1Q8NFW1 1626 aaPredicted RBP28.77■■■□□ 2.2
CHFR-209ENST00000535181 XPCQ01831 940 aaPredicted RBP28.77■■■□□ 2.2
CHFR-209ENST00000535181 CABP1Q9NZU7 370 aa28.77■■■□□ 2.2
CHFR-209ENST00000535181 TNS3Q68CZ2 1445 aa28.77■■■□□ 2.2
CHFR-209ENST00000535181 NINLQ9Y2I6 1382 aa28.76■■■□□ 2.2
CHFR-209ENST00000535181 SPATA31A3Q5VYP0 1347 aa28.76■■■□□ 2.19
CHFR-209ENST00000535181 BRD4O60885 1362 aaPredicted RBP28.75■■■□□ 2.19
CHFR-209ENST00000535181 SPATA31A6Q5VVP1 1343 aa28.75■■■□□ 2.19
CHFR-209ENST00000535181 AKAP12Q02952 1782 aa28.73■■■□□ 2.19
CHFR-209ENST00000535181 ALS2Q96Q42 1657 aa28.73■■■□□ 2.19
CHFR-209ENST00000535181 CPSF1Q10570 1443 aaKnown RBP28.72■■■□□ 2.19
CHFR-209ENST00000535181 ARHGEF10O15013 1369 aa28.71■■■□□ 2.19
CHFR-209ENST00000535181 USP6P35125 1406 aa28.7■■■□□ 2.19
CHFR-209ENST00000535181 ZNF692Q9BU19 519 aaPredicted RBP28.7■■■□□ 2.18
CHFR-209ENST00000535181 ZEB1P37275 1124 aaPredicted RBP28.69■■■□□ 2.18
CHFR-209ENST00000535181 CD163L1Q9NR16 1453 aa28.69■■■□□ 2.18
CHFR-209ENST00000535181 MED1Q15648 1581 aaPredicted RBP28.68■■■□□ 2.18
CHFR-209ENST00000535181 MON2Q7Z3U7 1717 aa28.68■■■□□ 2.18
CHFR-209ENST00000535181 SSH2Q76I76 1423 aa28.67■■■□□ 2.18
CHFR-209ENST00000535181 TMC1Q8TDI8 760 aa28.65■■■□□ 2.18
CHFR-209ENST00000535181 SLC12A5Q9H2X9 1139 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms