RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 LMOD2Q6P5Q4 547 aa10.28□□□□□ -0.76
TNFRSF1A-206ENST00000535038 CD2BP2O95400 341 aaKnown RBP10.27□□□□□ -0.77
TNFRSF1A-206ENST00000535038 PKD2L1Q9P0L9 805 aa10.27□□□□□ -0.77
TNFRSF1A-206ENST00000535038 ZBTB24O43167 697 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF1A-206ENST00000535038 USP46P62068 366 aa10.24□□□□□ -0.77
TNFRSF1A-206ENST00000535038 GPCPD1Q9NPB8 672 aa10.24□□□□□ -0.77
TNFRSF1A-206ENST00000535038 CLCN1P35523 988 aa10.23□□□□□ -0.77
TNFRSF1A-206ENST00000535038 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.22□□□□□ -0.77
TNFRSF1A-206ENST00000535038 USB1Q9BQ65 265 aaKnown RBP10.22□□□□□ -0.77
TNFRSF1A-206ENST00000535038 HOXA2O43364 376 aa10.21□□□□□ -0.77
TNFRSF1A-206ENST00000535038 MMP16P51512 607 aa10.21□□□□□ -0.77
TNFRSF1A-206ENST00000535038 KRI1Q8N9T8 703 aaKnown RBP10.21□□□□□ -0.77
TNFRSF1A-206ENST00000535038 HLA-CQ95604 372 aa10.21□□□□□ -0.77
TNFRSF1A-206ENST00000535038 MYO15BQ96JP2 1530 aa10.2□□□□□ -0.78
TNFRSF1A-206ENST00000535038 FAM217BQ9NTX9 383 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF1A-206ENST00000535038 CYP4X1Q8N118 509 aa10.19□□□□□ -0.78
TNFRSF1A-206ENST00000535038 TOR4AQ9NXH8 423 aa10.19□□□□□ -0.78
TNFRSF1A-206ENST00000535038 ST8SIA5O15466 376 aa10.18□□□□□ -0.78
TNFRSF1A-206ENST00000535038 DXOO77932 396 aaKnown RBP10.18□□□□□ -0.78
TNFRSF1A-206ENST00000535038 TRIM32Q13049 653 aa10.17□□□□□ -0.78
TNFRSF1A-206ENST00000535038 AAASQ9NRG9 546 aa10.17□□□□□ -0.78
TNFRSF1A-206ENST00000535038 GUCA2AQ02747 115 aa10.16□□□□□ -0.78
TNFRSF1A-206ENST00000535038 NUTM1Q86Y26 1132 aa10.16□□□□□ -0.78
TNFRSF1A-206ENST00000535038 ZNF775Q96BV0 537 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF1A-206ENST00000535038 POTECB2RU33 542 aa10.15□□□□□ -0.78
TNFRSF1A-206ENST00000535038 TTC24A2A3L6 582 aaPredicted RBP10.14□□□□□ -0.79
TNFRSF1A-206ENST00000535038 WNT7AO00755 349 aa10.14□□□□□ -0.79
TNFRSF1A-206ENST00000535038 CRIPAKQ8N1N5 446 aa10.14□□□□□ -0.79
TNFRSF1A-206ENST00000535038 CCDC24Q8N4L8 307 aa10.14□□□□□ -0.79
TNFRSF1A-206ENST00000535038 AVPP01185 164 aa10.13□□□□□ -0.79
TNFRSF1A-206ENST00000535038 REPIN1Q9BWE0 567 aaKnown RBP10.13□□□□□ -0.79
TNFRSF1A-206ENST00000535038 SUPT5HO00267 1087 aaKnown RBP10.11□□□□□ -0.79
TNFRSF1A-206ENST00000535038 AXIN1O15169 862 aa10.11□□□□□ -0.79
TNFRSF1A-206ENST00000535038 JUNDP17535 347 aa10.11□□□□□ -0.79
TNFRSF1A-206ENST00000535038 SYMPKQ92797 1274 aaKnown RBP10.11□□□□□ -0.79
TNFRSF1A-206ENST00000535038 SSTR3P32745 418 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF1A-206ENST00000535038 TTLL12Q14166 644 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF1A-206ENST00000535038 CTC1Q2NKJ3 1217 aa10.1□□□□□ -0.79
TNFRSF1A-206ENST00000535038 BARGINQ6ZT62 677 aa10.1□□□□□ -0.79
TNFRSF1A-206ENST00000535038 RETREG3Q86VR2 466 aa10.1□□□□□ -0.79
TNFRSF1A-206ENST00000535038 SNIP1Q8TAD8 396 aaKnown RBP10.1□□□□□ -0.79
TNFRSF1A-206ENST00000535038 MRGPRX2Q96LB1 330 aa10.1□□□□□ -0.79
TNFRSF1A-206ENST00000535038 ZMYND10O75800 440 aa10.09□□□□□ -0.79
TNFRSF1A-206ENST00000535038 FDX1P10109 184 aa10.09□□□□□ -0.79
TNFRSF1A-206ENST00000535038 C6orf229H3BNL8 230 aa10.07□□□□□ -0.8
TNFRSF1A-206ENST00000535038 SMCPP49901 116 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF1A-206ENST00000535038 ZC3H15Q8WU90 426 aaKnown RBP10.07□□□□□ -0.8
TNFRSF1A-206ENST00000535038 DACH1Q9UI36 760 aa10.07□□□□□ -0.8
TNFRSF1A-206ENST00000535038 ABCC9O60706 1549 aa10.07□□□□□ -0.8
TNFRSF1A-206ENST00000535038 SMPD1P17405 629 aa10.06□□□□□ -0.8
TNFRSF1A-206ENST00000535038 WNT7BP56706 349 aa10.06□□□□□ -0.8
TNFRSF1A-206ENST00000535038 AMHR2Q16671 573 aa10.06□□□□□ -0.8
TNFRSF1A-206ENST00000535038 SPIRE2Q8WWL2 714 aa10.06□□□□□ -0.8
TNFRSF1A-206ENST00000535038 NUDT12Q9BQG2 462 aa10.06□□□□□ -0.8
TNFRSF1A-206ENST00000535038 PCDHGC3Q9UN70 934 aa10.06□□□□□ -0.8
TNFRSF1A-206ENST00000535038 RC3H1Q5TC82 1133 aaKnown RBP10.05□□□□□ -0.8
TNFRSF1A-206ENST00000535038 J3QL48 77 aa10.04□□□□□ -0.8
TNFRSF1A-206ENST00000535038 SKOR1P84550 965 aa10.04□□□□□ -0.8
TNFRSF1A-206ENST00000535038 GIGYF2Q6Y7W6 1299 aaKnown RBP10.04□□□□□ -0.8
TNFRSF1A-206ENST00000535038 GMPR2Q9P2T1 348 aaKnown RBP10.03□□□□□ -0.8
TNFRSF1A-206ENST00000535038 MOXD2PA6NHM9 499 aa10.02□□□□□ -0.81
TNFRSF1A-206ENST00000535038 MS4A1P11836 297 aa10.02□□□□□ -0.81
TNFRSF1A-206ENST00000535038 NDUFV2P19404 249 aa10.02□□□□□ -0.81
TNFRSF1A-206ENST00000535038 C11orf95C9JLR9 678 aaPredicted RBP10.01□□□□□ -0.81
TNFRSF1A-206ENST00000535038 CCNYL3P0C7X3 344 aa10□□□□□ -0.81
TNFRSF1A-206ENST00000535038 PTCRAQ6ISU1 281 aaPredicted RBP10□□□□□ -0.81
TNFRSF1A-206ENST00000535038 BEGAINQ9BUH8 593 aa10□□□□□ -0.81
TNFRSF1A-206ENST00000535038 PTPRNQ16849 979 aa9.99□□□□□ -0.81
TNFRSF1A-206ENST00000535038 MTMR2Q13614 643 aa9.98□□□□□ -0.81
TNFRSF1A-206ENST00000535038 HPS1Q92902 700 aa9.98□□□□□ -0.81
TNFRSF1A-206ENST00000535038 SPDYE5A6NIY4 337 aa9.97□□□□□ -0.81
TNFRSF1A-206ENST00000535038 ALDH1A1P00352 501 aa9.97□□□□□ -0.81
TNFRSF1A-206ENST00000535038 EHBP1Q8NDI1 1231 aa9.97□□□□□ -0.81
TNFRSF1A-206ENST00000535038 PRR7Q8TB68 274 aa9.97□□□□□ -0.81
TNFRSF1A-206ENST00000535038 ATP13A2Q9NQ11 1180 aa9.97□□□□□ -0.81
TNFRSF1A-206ENST00000535038 NACADO15069 1562 aa9.97□□□□□ -0.81
TNFRSF1A-206ENST00000535038 DIXDC1Q155Q3 683 aa9.96□□□□□ -0.82
TNFRSF1A-206ENST00000535038 PARP9Q8IXQ6 854 aa9.96□□□□□ -0.82
TNFRSF1A-206ENST00000535038 TRIM66O15016 1216 aa9.95□□□□□ -0.82
TNFRSF1A-206ENST00000535038 TREML4Q6UXN2 200 aa9.95□□□□□ -0.82
TNFRSF1A-206ENST00000535038 TBC1D2Q9BYX2 928 aa9.95□□□□□ -0.82
TNFRSF1A-206ENST00000535038 EVA1BQ9NVM1 165 aa9.95□□□□□ -0.82
TNFRSF1A-206ENST00000535038 GJA5P36382 358 aa9.94□□□□□ -0.82
TNFRSF1A-206ENST00000535038 SH3BP2P78314 561 aa9.94□□□□□ -0.82
TNFRSF1A-206ENST00000535038 DESI1Q6ICB0 168 aa9.94□□□□□ -0.82
TNFRSF1A-206ENST00000535038 UNC93B1Q9H1C4 597 aa9.94□□□□□ -0.82
TNFRSF1A-206ENST00000535038 SCRIBQ14160 1630 aa9.93□□□□□ -0.82
TNFRSF1A-206ENST00000535038 SIAH2O43255 324 aa9.93□□□□□ -0.82
TNFRSF1A-206ENST00000535038 KCNH2Q12809 1159 aa9.93□□□□□ -0.82
TNFRSF1A-206ENST00000535038 RSBN1LQ6PCB5 846 aaPredicted RBP9.93□□□□□ -0.82
TNFRSF1A-206ENST00000535038 AK7Q96M32 723 aa9.93□□□□□ -0.82
TNFRSF1A-206ENST00000535038 SENP2Q9HC62 589 aa9.93□□□□□ -0.82
TNFRSF1A-206ENST00000535038 LINC01559Q495D7 138 aa9.91□□□□□ -0.82
TNFRSF1A-206ENST00000535038 TRIM47Q96LD4 638 aa9.91□□□□□ -0.82
TNFRSF1A-206ENST00000535038 WASF2Q9Y6W5 498 aa9.91□□□□□ -0.82
TNFRSF1A-206ENST00000535038 LCE2AQ5TA79 106 aaPredicted RBP9.9□□□□□ -0.82
TNFRSF1A-206ENST00000535038 BAP1Q92560 729 aa9.9□□□□□ -0.82
TNFRSF1A-206ENST00000535038 RSF1Q96T23 1441 aaPredicted RBP9.9□□□□□ -0.83
TNFRSF1A-206ENST00000535038 SPTLC1O15269 473 aa9.89□□□□□ -0.83
TNFRSF1A-206ENST00000535038 WFS1O76024 890 aa9.89□□□□□ -0.83
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