RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 TBX22Q9Y458 520 aa23.44■■□□□ 1.34
VPS51-216ENST00000534591 PRKRIP1Q9H875 184 aaPredicted RBP23.43■■□□□ 1.34
VPS51-216ENST00000534591 ARHGEF28Q8N1W1 1705 aaKnown RBP23.43■■□□□ 1.34
VPS51-216ENST00000534591 PIP4K2BP78356 416 aa23.43■■□□□ 1.34
VPS51-216ENST00000534591 QRICH2Q9H0J4 1663 aa23.42■■□□□ 1.34
VPS51-216ENST00000534591 YTHDC2Q9H6S0 1430 aaKnown RBP23.41■■□□□ 1.34
VPS51-216ENST00000534591 SCAF1Q9H7N4 1312 aaKnown RBP23.4■■□□□ 1.34
VPS51-216ENST00000534591 TOM1O60784 492 aa23.39■■□□□ 1.34
VPS51-216ENST00000534591 METP08581 1390 aa23.39■■□□□ 1.33
VPS51-216ENST00000534591 PROSER2Q86WR7 435 aaPredicted RBP23.38■■□□□ 1.33
VPS51-216ENST00000534591 PIK3R4Q99570 1358 aa23.38■■□□□ 1.33
VPS51-216ENST00000534591 CENPBP07199 599 aaPredicted RBP23.38■■□□□ 1.33
VPS51-216ENST00000534591 KTN1Q86UP2 1357 aaKnown RBP23.37■■□□□ 1.33
VPS51-216ENST00000534591 PUS7Q96PZ0 661 aaKnown RBP23.37■■□□□ 1.33
VPS51-216ENST00000534591 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.37■■□□□ 1.33
VPS51-216ENST00000534591 YTHDC1Q96MU7 727 aaKnown RBP23.36■■□□□ 1.33
VPS51-216ENST00000534591 LRPPRCP42704 1394 aaKnown RBP23.36■■□□□ 1.33
VPS51-216ENST00000534591 DLC1Q96QB1 1528 aa23.35■■□□□ 1.33
VPS51-216ENST00000534591 PER1O15534 1290 aaPredicted RBP23.34■■□□□ 1.33
VPS51-216ENST00000534591 PANK3Q9H999 370 aa23.34■■□□□ 1.33
VPS51-216ENST00000534591 STK26Q9P289 416 aa23.34■■□□□ 1.33
VPS51-216ENST00000534591 ABCC11Q96J66 1382 aa23.34■■□□□ 1.33
VPS51-216ENST00000534591 ROBO1Q9Y6N7 1651 aa23.33■■□□□ 1.33
VPS51-216ENST00000534591 NALCNQ8IZF0 1738 aa23.33■■□□□ 1.32
VPS51-216ENST00000534591 AMOTL2Q9Y2J4 779 aa23.33■■□□□ 1.32
VPS51-216ENST00000534591 MYOM1P52179 1685 aa23.32■■□□□ 1.32
VPS51-216ENST00000534591 EVC2Q86UK5 1308 aa23.31■■□□□ 1.32
VPS51-216ENST00000534591 HSPA1LP34931 641 aa23.3■■□□□ 1.32
VPS51-216ENST00000534591 RALBP1Q15311 655 aa23.3■■□□□ 1.32
VPS51-216ENST00000534591 POGKQ9P215 609 aa23.29■■□□□ 1.32
VPS51-216ENST00000534591 MSH6P52701 1360 aa23.28■■□□□ 1.32
VPS51-216ENST00000534591 SIRT1Q96EB6 747 aa23.28■■□□□ 1.32
VPS51-216ENST00000534591 PRAM1Q96QH2 718 aa23.28■■□□□ 1.32
VPS51-216ENST00000534591 TULP4Q9NRJ4 1543 aa23.26■■□□□ 1.31
VPS51-216ENST00000534591 KNDC1Q76NI1 1749 aa23.26■■□□□ 1.31
VPS51-216ENST00000534591 TECPR2O15040 1411 aa23.26■■□□□ 1.31
VPS51-216ENST00000534591 KNSTRNQ9Y448 316 aa23.24■■□□□ 1.31
VPS51-216ENST00000534591 NCOA3Q9Y6Q9 1424 aa23.24■■□□□ 1.31
VPS51-216ENST00000534591 FAM135BQ49AJ0 1406 aa23.23■■□□□ 1.31
VPS51-216ENST00000534591 PARD3Q8TEW0 1356 aa23.23■■□□□ 1.31
VPS51-216ENST00000534591 NPC1L1Q9UHC9 1359 aa23.22■■□□□ 1.31
VPS51-216ENST00000534591 PTCH1Q13635 1447 aa23.21■■□□□ 1.31
VPS51-216ENST00000534591 MYBBP1AQ9BQG0 1328 aaKnown RBP23.21■■□□□ 1.31
VPS51-216ENST00000534591 SAFB2Q14151 953 aaKnown RBP eCLIP23.21■■□□□ 1.31
VPS51-216ENST00000534591 C14orf37Q86TY3 774 aa23.21■■□□□ 1.31
VPS51-216ENST00000534591 MRS2Q9HD23 443 aa23.21■■□□□ 1.31
VPS51-216ENST00000534591 ROBO2Q9HCK4 1378 aa23.2■■□□□ 1.31
VPS51-216ENST00000534591 NINLQ9Y2I6 1382 aa23.2■■□□□ 1.31
VPS51-216ENST00000534591 MINK1Q8N4C8 1332 aaPredicted RBP23.19■■□□□ 1.3
VPS51-216ENST00000534591 PHLPP1O60346 1717 aa23.19■■□□□ 1.3
VPS51-216ENST00000534591 ATAD2Q6PL18 1390 aa23.18■■□□□ 1.3
VPS51-216ENST00000534591 CCDC184Q52MB2 194 aa23.18■■□□□ 1.3
VPS51-216ENST00000534591 ADGRL3Q9HAR2 1447 aa23.17■■□□□ 1.3
VPS51-216ENST00000534591 CNGB1Q14028 1251 aaPredicted RBP23.17■■□□□ 1.3
VPS51-216ENST00000534591 AMER1Q5JTC6 1135 aaPredicted RBP23.17■■□□□ 1.3
VPS51-216ENST00000534591 BRD4O60885 1362 aaPredicted RBP23.16■■□□□ 1.3
VPS51-216ENST00000534591 SLAIN2Q9P270 581 aa23.16■■□□□ 1.3
VPS51-216ENST00000534591 SRPK2P78362 688 aaKnown RBP23.15■■□□□ 1.3
VPS51-216ENST00000534591 WAPLQ7Z5K2 1190 aa23.15■■□□□ 1.3
VPS51-216ENST00000534591 TMC1Q8TDI8 760 aa23.15■■□□□ 1.3
VPS51-216ENST00000534591 C19orf44Q9H6X5 657 aa23.15■■□□□ 1.3
VPS51-216ENST00000534591 MED1Q15648 1581 aaPredicted RBP23.15■■□□□ 1.3
VPS51-216ENST00000534591 DCCP43146 1447 aa23.14■■□□□ 1.3
VPS51-216ENST00000534591 CC2D1BQ5T0F9 858 aaKnown RBP23.14■■□□□ 1.3
VPS51-216ENST00000534591 CABP2Q9NPB3 220 aa23.14■■□□□ 1.3
VPS51-216ENST00000534591 PLEKHH1Q9ULM0 1364 aa23.14■■□□□ 1.3
VPS51-216ENST00000534591 NLRP13Q86W25 1043 aa23.13■■□□□ 1.29
VPS51-216ENST00000534591 SLC12A5Q9H2X9 1139 aa23.13■■□□□ 1.29
VPS51-216ENST00000534591 CDK19Q9BWU1 502 aa23.13■■□□□ 1.29
VPS51-216ENST00000534591 CARD14Q9BXL6 1004 aa23.13■■□□□ 1.29
VPS51-216ENST00000534591 COL16A1Q07092 1604 aaPredicted RBP23.12■■□□□ 1.29
VPS51-216ENST00000534591 MST1RQ04912 1400 aa23.12■■□□□ 1.29
VPS51-216ENST00000534591 ANKRD36BQ8N2N9 1353 aa23.12■■□□□ 1.29
VPS51-216ENST00000534591 ATF3P18847 181 aa23.1■■□□□ 1.29
VPS51-216ENST00000534591 CADPS2Q86UW7 1296 aa23.1■■□□□ 1.29
VPS51-216ENST00000534591 NHSL1Q5SYE7 1610 aa23.08■■□□□ 1.29
VPS51-216ENST00000534591 AHDC1Q5TGY3 1603 aaPredicted RBP23.08■■□□□ 1.28
VPS51-216ENST00000534591 USP32Q8NFA0 1604 aa23.08■■□□□ 1.28
VPS51-216ENST00000534591 NSD3Q9BZ95 1437 aa23.07■■□□□ 1.28
VPS51-216ENST00000534591 WASLO00401 505 aaPredicted RBP23.07■■□□□ 1.28
VPS51-216ENST00000534591 CDC42BPGQ6DT37 1551 aa23.07■■□□□ 1.28
VPS51-216ENST00000534591 ADGRB2O60241 1585 aa23.05■■□□□ 1.28
VPS51-216ENST00000534591 FAM9BQ8IZU0 186 aa23.05■■□□□ 1.28
VPS51-216ENST00000534591 TERF2IPQ9NYB0 399 aa23.05■■□□□ 1.28
VPS51-216ENST00000534591 BRINP3Q76B58 766 aa23.03■■□□□ 1.28
VPS51-216ENST00000534591 PNISRQ8TF01 805 aaKnown RBP23.03■■□□□ 1.28
VPS51-216ENST00000534591 RGPD8O14715 1765 aaPredicted RBP23.03■■□□□ 1.28
VPS51-216ENST00000534591 CGNL1Q0VF96 1302 aa23.03■■□□□ 1.28
VPS51-216ENST00000534591 FMN2Q9NZ56 1722 aa23.03■■□□□ 1.28
VPS51-216ENST00000534591 C1orf167Q5SNV9 1468 aa23.01■■□□□ 1.27
VPS51-216ENST00000534591 NSD2O96028 1365 aa23.01■■□□□ 1.27
VPS51-216ENST00000534591 PPP2R1AP30153 589 aa23■■□□□ 1.27
VPS51-216ENST00000534591 HDGFL2Q7Z4V5 671 aaPredicted RBP23■■□□□ 1.27
VPS51-216ENST00000534591 ATP7BP35670 1465 aa23■■□□□ 1.27
VPS51-216ENST00000534591 A0A1W2PP64 1363 aa22.99■■□□□ 1.27
VPS51-216ENST00000534591 SHPRHQ149N8 1683 aa22.99■■□□□ 1.27
VPS51-216ENST00000534591 HNRNPUQ00839 825 aaKnown RBP eCLIP22.98■■□□□ 1.27
VPS51-216ENST00000534591 CD163L1Q9NR16 1453 aa22.98■■□□□ 1.27
VPS51-216ENST00000534591 CABP1Q9NZU7 370 aa22.98■■□□□ 1.27
VPS51-216ENST00000534591 DDX17Q92841 729 aaKnown RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms