RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 FAM135BQ49AJ0 1406 aa20.19■□□□□ 0.82
VPS11-205ENST00000534551 TOM1O60784 492 aa20.18■□□□□ 0.82
VPS11-205ENST00000534551 SAFB2Q14151 953 aaKnown RBP eCLIP20.17■□□□□ 0.82
VPS11-205ENST00000534551 MST1RQ04912 1400 aa20.17■□□□□ 0.82
VPS11-205ENST00000534551 RALGAPBQ86X10 1494 aa20.17■□□□□ 0.82
VPS11-205ENST00000534551 ADGRB2O60241 1585 aa20.17■□□□□ 0.82
VPS11-205ENST00000534551 PRAM1Q96QH2 718 aa20.16■□□□□ 0.82
VPS11-205ENST00000534551 CLSPNQ9HAW4 1339 aa20.16■□□□□ 0.82
VPS11-205ENST00000534551 ROCK2O75116 1388 aaKnown RBP20.14■□□□□ 0.81
VPS11-205ENST00000534551 C19orf44Q9H6X5 657 aa20.14■□□□□ 0.81
VPS11-205ENST00000534551 USP32Q8NFA0 1604 aa20.13■□□□□ 0.81
VPS11-205ENST00000534551 PHLPP1O60346 1717 aa20.13■□□□□ 0.81
VPS11-205ENST00000534551 ATF3P18847 181 aa20.12■□□□□ 0.81
VPS11-205ENST00000534551 NHSL1Q5SYE7 1610 aa20.12■□□□□ 0.81
VPS11-205ENST00000534551 CADPS2Q86UW7 1296 aa20.1■□□□□ 0.81
VPS11-205ENST00000534551 POGKQ9P215 609 aa20.09■□□□□ 0.81
VPS11-205ENST00000534551 C1orf167Q5SNV9 1468 aa20.09■□□□□ 0.81
VPS11-205ENST00000534551 GPRASP1Q5JY77 1395 aa20.08■□□□□ 0.81
VPS11-205ENST00000534551 MINK1Q8N4C8 1332 aaPredicted RBP20.08■□□□□ 0.81
VPS11-205ENST00000534551 HIRIP3Q9BW71 556 aaPredicted RBP20.08■□□□□ 0.81
VPS11-205ENST00000534551 SLAIN2Q9P270 581 aa20.08■□□□□ 0.81
VPS11-205ENST00000534551 COL16A1Q07092 1604 aaPredicted RBP20.08■□□□□ 0.8
VPS11-205ENST00000534551 AHDC1Q5TGY3 1603 aaPredicted RBP20.07■□□□□ 0.8
VPS11-205ENST00000534551 NUTM2FA1L443 756 aa20.07■□□□□ 0.8
VPS11-205ENST00000534551 HSPA1LP34931 641 aa20.07■□□□□ 0.8
VPS11-205ENST00000534551 SIRT1Q96EB6 747 aa20.07■□□□□ 0.8
VPS11-205ENST00000534551 TULP4Q9NRJ4 1543 aa20.04■□□□□ 0.8
VPS11-205ENST00000534551 BRINP3Q76B58 766 aa20.04■□□□□ 0.8
VPS11-205ENST00000534551 TOPAZ1Q8N9V7 1692 aa20.03■□□□□ 0.8
VPS11-205ENST00000534551 ITSN1Q15811 1721 aa20.03■□□□□ 0.8
VPS11-205ENST00000534551 KIF1AQ12756 1690 aa20.02■□□□□ 0.8
VPS11-205ENST00000534551 DDX17Q92841 729 aaKnown RBP20.01■□□□□ 0.79
VPS11-205ENST00000534551 CENPJQ9HC77 1338 aaPredicted RBP20.01■□□□□ 0.79
VPS11-205ENST00000534551 ORAI2Q96SN7 254 aa20■□□□□ 0.79
VPS11-205ENST00000534551 CARD11Q9BXL7 1154 aa20■□□□□ 0.79
VPS11-205ENST00000534551 ATP7BP35670 1465 aa19.99■□□□□ 0.79
VPS11-205ENST00000534551 PRR36Q9H6K5 1346 aa19.99■□□□□ 0.79
VPS11-205ENST00000534551 EIF3AQ14152 1382 aaKnown RBP19.96■□□□□ 0.79
VPS11-205ENST00000534551 ANKARQ7Z5J8 1434 aa19.95■□□□□ 0.78
VPS11-205ENST00000534551 TIMELESSQ9UNS1 1208 aa19.95■□□□□ 0.78
VPS11-205ENST00000534551 SHPRHQ149N8 1683 aa19.94■□□□□ 0.78
VPS11-205ENST00000534551 WASLO00401 505 aaPredicted RBP19.94■□□□□ 0.78
VPS11-205ENST00000534551 ESCO1Q5FWF5 840 aa19.94■□□□□ 0.78
VPS11-205ENST00000534551 USP47Q96K76 1375 aa19.93■□□□□ 0.78
VPS11-205ENST00000534551 PXDNQ92626 1479 aa19.92■□□□□ 0.78
VPS11-205ENST00000534551 TRPM3Q9HCF6 1732 aaPredicted RBP19.91■□□□□ 0.78
VPS11-205ENST00000534551 XPCQ01831 940 aaPredicted RBP19.91■□□□□ 0.78
VPS11-205ENST00000534551 MED1Q15648 1581 aaPredicted RBP19.91■□□□□ 0.78
VPS11-205ENST00000534551 CDK19Q9BWU1 502 aa19.9■□□□□ 0.78
VPS11-205ENST00000534551 PMFBP1Q8TBY8 1022 aa19.88■□□□□ 0.77
VPS11-205ENST00000534551 CABP2Q9NPB3 220 aa19.88■□□□□ 0.77
VPS11-205ENST00000534551 SBNO2Q9Y2G9 1366 aa19.87■□□□□ 0.77
VPS11-205ENST00000534551 FOXO3O43524 673 aa19.87■□□□□ 0.77
VPS11-205ENST00000534551 PHF8Q9UPP1 1060 aa19.87■□□□□ 0.77
VPS11-205ENST00000534551 AKAP12Q02952 1782 aa19.86■□□□□ 0.77
VPS11-205ENST00000534551 ABCA3Q99758 1704 aa19.85■□□□□ 0.77
VPS11-205ENST00000534551 ST20-MTHFSA0A0A6YYL1 179 aa19.85■□□□□ 0.77
VPS11-205ENST00000534551 SRPK2P78362 688 aaKnown RBP19.85■□□□□ 0.77
VPS11-205ENST00000534551 NUDT16Q96DE0 195 aaKnown RBP19.85■□□□□ 0.77
VPS11-205ENST00000534551 ALS2Q96Q42 1657 aa19.84■□□□□ 0.77
VPS11-205ENST00000534551 LRP6O75581 1613 aa19.84■□□□□ 0.77
VPS11-205ENST00000534551 COL22A1Q8NFW1 1626 aaPredicted RBP19.84■□□□□ 0.77
VPS11-205ENST00000534551 SOS2Q07890 1332 aaPredicted RBP19.84■□□□□ 0.77
VPS11-205ENST00000534551 NPHP3Q7Z494 1330 aa19.84■□□□□ 0.77
VPS11-205ENST00000534551 PPIP5K1Q6PFW1 1433 aa19.84■□□□□ 0.77
VPS11-205ENST00000534551 JCADQ9P266 1359 aa19.83■□□□□ 0.77
VPS11-205ENST00000534551 TESK2Q96S53 571 aa19.83■□□□□ 0.77
VPS11-205ENST00000534551 PNPLA6Q8IY17 1366 aa19.83■□□□□ 0.76
VPS11-205ENST00000534551 EVC2Q86UK5 1308 aa19.82■□□□□ 0.76
VPS11-205ENST00000534551 DISP3Q9P2K9 1392 aa19.82■□□□□ 0.76
VPS11-205ENST00000534551 MON2Q7Z3U7 1717 aa19.8■□□□□ 0.76
VPS11-205ENST00000534551 CRYBG1Q9Y4K1 1723 aa19.8■□□□□ 0.76
VPS11-205ENST00000534551 NRKQ7Z2Y5 1582 aa19.8■□□□□ 0.76
VPS11-205ENST00000534551 MYOM1P52179 1685 aa19.8■□□□□ 0.76
VPS11-205ENST00000534551 TNS3Q68CZ2 1445 aa19.79■□□□□ 0.76
VPS11-205ENST00000534551 MARF1Q9Y4F3 1742 aaKnown RBP19.78■□□□□ 0.76
VPS11-205ENST00000534551 KRT28Q7Z3Y7 464 aa19.77■□□□□ 0.76
VPS11-205ENST00000534551 CCDC61Q9Y6R9 512 aa19.77■□□□□ 0.76
VPS11-205ENST00000534551 POLR3AO14802 1390 aaPredicted RBP19.77■□□□□ 0.76
VPS11-205ENST00000534551 ACEP12821 1306 aa19.76■□□□□ 0.75
VPS11-205ENST00000534551 ATAD2Q6PL18 1390 aa19.75■□□□□ 0.75
VPS11-205ENST00000534551 NGDNQ8NEJ9 315 aaKnown RBP19.75■□□□□ 0.75
VPS11-205ENST00000534551 PHRF1Q9P1Y6 1649 aaKnown RBP19.75■□□□□ 0.75
VPS11-205ENST00000534551 HSPA5P11021 654 aaKnown RBP19.74■□□□□ 0.75
VPS11-205ENST00000534551 LRRC59Q96AG4 307 aaKnown RBP19.74■□□□□ 0.75
VPS11-205ENST00000534551 PIK3C2AO00443 1686 aa19.74■□□□□ 0.75
VPS11-205ENST00000534551 SPATA31A3Q5VYP0 1347 aa19.74■□□□□ 0.75
VPS11-205ENST00000534551 CD163L1Q9NR16 1453 aa19.73■□□□□ 0.75
VPS11-205ENST00000534551 PLEKHG5O94827 1062 aa19.73■□□□□ 0.75
VPS11-205ENST00000534551 PSME1Q06323 249 aa19.73■□□□□ 0.75
VPS11-205ENST00000534551 CABP1Q9NZU7 370 aa19.73■□□□□ 0.75
VPS11-205ENST00000534551 SBNO1A3KN83 1393 aa19.72■□□□□ 0.75
VPS11-205ENST00000534551 NUTM2BA6NNL0 878 aaPredicted RBP19.72■□□□□ 0.75
VPS11-205ENST00000534551 NUTM2EB1AL46 878 aaPredicted RBP19.72■□□□□ 0.75
VPS11-205ENST00000534551 NUTM2AQ8IVF1 878 aaPredicted RBP19.72■□□□□ 0.75
VPS11-205ENST00000534551 USP6P35125 1406 aa19.71■□□□□ 0.75
VPS11-205ENST00000534551 PLEKHG3A1L390 1219 aa19.71■□□□□ 0.75
VPS11-205ENST00000534551 SPATA31A6Q5VVP1 1343 aa19.7■□□□□ 0.74
VPS11-205ENST00000534551 EIF4G2P78344 907 aaKnown RBP eCLIP19.69■□□□□ 0.74
VPS11-205ENST00000534551 LMOD2Q6P5Q4 547 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms