RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-213ENST00000534532 PRDM11Q9NQV5 511 aa19.25■□□□□ 0.67
NCAPD3-213ENST00000534532 C9orf84Q5VXU9 1444 aa19.25■□□□□ 0.67
NCAPD3-213ENST00000534532 KIF21BO75037 1637 aa19.24■□□□□ 0.67
NCAPD3-213ENST00000534532 MTHFSP49914 203 aa19.24■□□□□ 0.67
NCAPD3-213ENST00000534532 PLIN1O60240 522 aa19.23■□□□□ 0.67
NCAPD3-213ENST00000534532 PHF14O94880 888 aa19.23■□□□□ 0.67
NCAPD3-213ENST00000534532 TPD52L1Q16890 204 aaPredicted RBP19.23■□□□□ 0.67
NCAPD3-213ENST00000534532 HMGXB3Q12766 1538 aa19.23■□□□□ 0.67
NCAPD3-213ENST00000534532 RPGRIP1LQ68CZ1 1315 aa19.23■□□□□ 0.67
NCAPD3-213ENST00000534532 UBTFL1P0CB47 393 aaPredicted RBP19.23■□□□□ 0.67
NCAPD3-213ENST00000534532 AMER1Q5JTC6 1135 aaPredicted RBP19.23■□□□□ 0.67
NCAPD3-213ENST00000534532 CCDC30Q5VVM6 783 aa19.23■□□□□ 0.67
NCAPD3-213ENST00000534532 POLA1P09884 1462 aaPredicted RBP19.23■□□□□ 0.67
NCAPD3-213ENST00000534532 ZBED9Q6R2W3 1325 aa19.23■□□□□ 0.67
NCAPD3-213ENST00000534532 RRP1P56182 461 aaKnown RBP19.23■□□□□ 0.67
NCAPD3-213ENST00000534532 CDK19Q9BWU1 502 aa19.23■□□□□ 0.67
NCAPD3-213ENST00000534532 GZF1Q9H116 711 aaPredicted RBP19.23■□□□□ 0.67
NCAPD3-213ENST00000534532 PPP1R1BQ9UD71 204 aaPredicted RBP19.22■□□□□ 0.67
NCAPD3-213ENST00000534532 NFXL1Q6ZNB6 911 aa19.22■□□□□ 0.67
NCAPD3-213ENST00000534532 SPG7Q9UQ90 795 aa19.21■□□□□ 0.67
NCAPD3-213ENST00000534532 MCTP1Q6DN14 999 aa19.21■□□□□ 0.67
NCAPD3-213ENST00000534532 CCDC27Q2M243 656 aa19.21■□□□□ 0.67
NCAPD3-213ENST00000534532 EFCAB5A4FU69 1503 aa19.21■□□□□ 0.67
NCAPD3-213ENST00000534532 ANO2Q9NQ90 1003 aa19.21■□□□□ 0.67
NCAPD3-213ENST00000534532 FAM177BA6PVY3 158 aa19.2■□□□□ 0.66
NCAPD3-213ENST00000534532 ERICH3Q5RHP9 1530 aa19.2■□□□□ 0.66
NCAPD3-213ENST00000534532 PES1O00541 588 aaKnown RBP19.2■□□□□ 0.66
NCAPD3-213ENST00000534532 CCDC47Q96A33 483 aaKnown RBP19.2■□□□□ 0.66
NCAPD3-213ENST00000534532 KIF7Q2M1P5 1343 aa19.2■□□□□ 0.66
NCAPD3-213ENST00000534532 CABP4P57796 275 aa19.2■□□□□ 0.66
NCAPD3-213ENST00000534532 RBM19Q9Y4C8 960 aaKnown RBP19.2■□□□□ 0.66
NCAPD3-213ENST00000534532 DDX54Q8TDD1 881 aaKnown RBP19.2■□□□□ 0.66
NCAPD3-213ENST00000534532 CRBNQ96SW2 442 aa19.19■□□□□ 0.66
NCAPD3-213ENST00000534532 TPM2P07951 284 aa19.19■□□□□ 0.66
NCAPD3-213ENST00000534532 CCDC7Q96M83 1385 aa19.19■□□□□ 0.66
NCAPD3-213ENST00000534532 TPM3P06753 285 aa19.19■□□□□ 0.66
NCAPD3-213ENST00000534532 WASHC4Q2M389 1173 aa19.19■□□□□ 0.66
NCAPD3-213ENST00000534532 CCDC43Q96MW1 224 aaKnown RBP19.19■□□□□ 0.66
NCAPD3-213ENST00000534532 RTEL1-TNFRSF6BF6WH68 1400 aa19.18■□□□□ 0.66
NCAPD3-213ENST00000534532 CABP1Q9NZU7 370 aa19.18■□□□□ 0.66
NCAPD3-213ENST00000534532 FOXD4L5Q5VV16 416 aaPredicted RBP19.17■□□□□ 0.66
NCAPD3-213ENST00000534532 SAMD1Q6SPF0 538 aaPredicted RBP19.17■□□□□ 0.66
NCAPD3-213ENST00000534532 PNISRQ8TF01 805 aaKnown RBP19.17■□□□□ 0.66
NCAPD3-213ENST00000534532 FOXD4L4Q8WXT5 416 aaPredicted RBP19.17■□□□□ 0.66
NCAPD3-213ENST00000534532 GNAI3P08754 354 aa19.17■□□□□ 0.66
NCAPD3-213ENST00000534532 PRKAR2BP31323 418 aa19.17■□□□□ 0.66
NCAPD3-213ENST00000534532 TSR1Q2NL82 804 aaKnown RBP19.17■□□□□ 0.66
NCAPD3-213ENST00000534532 RALYLQ86SE5 291 aaKnown RBP19.17■□□□□ 0.66
NCAPD3-213ENST00000534532 ANO8Q9HCE9 1232 aaPredicted RBP19.16■□□□□ 0.66
NCAPD3-213ENST00000534532 TBC1D2BQ9UPU7 963 aa19.16■□□□□ 0.66
NCAPD3-213ENST00000534532 FAM161AQ3B820 660 aa19.16■□□□□ 0.66
NCAPD3-213ENST00000534532 ZNF530Q6P9A1 599 aaPredicted RBP19.15■□□□□ 0.66
NCAPD3-213ENST00000534532 PDE4CQ08493 712 aa19.15■□□□□ 0.66
NCAPD3-213ENST00000534532 KIAA0586Q9BVV6 1533 aa19.15■□□□□ 0.66
NCAPD3-213ENST00000534532 EXOC6Q8TAG9 804 aa19.15■□□□□ 0.66
NCAPD3-213ENST00000534532 EHBP1L1Q8N3D4 1523 aa19.15■□□□□ 0.66
NCAPD3-213ENST00000534532 FYB1O15117 783 aa19.14■□□□□ 0.65
NCAPD3-213ENST00000534532 ANKRD30BQ9BXX2 1392 aa19.14■□□□□ 0.65
NCAPD3-213ENST00000534532 CD109Q6YHK3 1445 aa19.14■□□□□ 0.65
NCAPD3-213ENST00000534532 AAMPQ13685 434 aa19.14■□□□□ 0.65
NCAPD3-213ENST00000534532 CLASRPQ8N2M8 674 aaKnown RBP19.13■□□□□ 0.65
NCAPD3-213ENST00000534532 SAFBQ15424 915 aaKnown RBP eCLIP19.12■□□□□ 0.65
NCAPD3-213ENST00000534532 TCP11L2Q8N4U5 519 aa19.12■□□□□ 0.65
NCAPD3-213ENST00000534532 DNMBPQ6XZF7 1577 aa19.12■□□□□ 0.65
NCAPD3-213ENST00000534532 SULT6B1Q6IMI4 303 aa19.12■□□□□ 0.65
NCAPD3-213ENST00000534532 GNL3LQ9NVN8 582 aaKnown RBP19.12■□□□□ 0.65
NCAPD3-213ENST00000534532 SLC12A5Q9H2X9 1139 aa19.11■□□□□ 0.65
NCAPD3-213ENST00000534532 INTS3Q68E01 1043 aaKnown RBP19.11■□□□□ 0.65
NCAPD3-213ENST00000534532 TPM1P09493 284 aa19.11■□□□□ 0.65
NCAPD3-213ENST00000534532 CNTLNQ9NXG0 1405 aa19.11■□□□□ 0.65
NCAPD3-213ENST00000534532 KIAA1107Q9UPP5 1409 aa19.11■□□□□ 0.65
NCAPD3-213ENST00000534532 HECW1Q76N89 1606 aa19.1■□□□□ 0.65
NCAPD3-213ENST00000534532 CCAR1Q8IX12 1150 aaKnown RBP19.1■□□□□ 0.65
NCAPD3-213ENST00000534532 DMRT2Q9Y5R5 561 aa19.1■□□□□ 0.65
NCAPD3-213ENST00000534532 ERBINQ96RT1 1412 aa19.1■□□□□ 0.65
NCAPD3-213ENST00000534532 GOLGA6L3A6NEY3 463 aa19.09■□□□□ 0.65
NCAPD3-213ENST00000534532 BECN2A8MW95 431 aa19.09■□□□□ 0.65
NCAPD3-213ENST00000534532 IKQ13123 557 aaPredicted RBP19.09■□□□□ 0.65
NCAPD3-213ENST00000534532 ATAD2Q6PL18 1390 aa19.09■□□□□ 0.65
NCAPD3-213ENST00000534532 NBPF1Q3BBV0 1214 aa19.09■□□□□ 0.65
NCAPD3-213ENST00000534532 CNNM1Q9NRU3 951 aa19.09■□□□□ 0.65
NCAPD3-213ENST00000534532 HDGFL1Q5TGJ6 251 aa19.09■□□□□ 0.65
NCAPD3-213ENST00000534532 IPO9Q96P70 1041 aaKnown RBP19.09■□□□□ 0.65
NCAPD3-213ENST00000534532 GOLGA6L19H0YKK7 550 aa19.08■□□□□ 0.65
NCAPD3-213ENST00000534532 KCNH5Q8NCM2 988 aa19.08■□□□□ 0.65
NCAPD3-213ENST00000534532 HOOK1Q9UJC3 728 aaKnown RBP19.08■□□□□ 0.65
NCAPD3-213ENST00000534532 DDX11L8A8MPP1 907 aa19.08■□□□□ 0.65
NCAPD3-213ENST00000534532 CNKSR2Q8WXI2 1034 aa19.08■□□□□ 0.64
NCAPD3-213ENST00000534532 SURF6O75683 361 aaKnown RBP19.08■□□□□ 0.64
NCAPD3-213ENST00000534532 SLC3A2P08195 630 aaKnown RBP19.08■□□□□ 0.64
NCAPD3-213ENST00000534532 ARAP1Q96P48 1450 aa19.07■□□□□ 0.64
NCAPD3-213ENST00000534532 ANKRD20A12PQ8NF67 263 aa19.07■□□□□ 0.64
NCAPD3-213ENST00000534532 PPP2R1AP30153 589 aa19.07■□□□□ 0.64
NCAPD3-213ENST00000534532 SART3Q15020 963 aaKnown RBP19.07■□□□□ 0.64
NCAPD3-213ENST00000534532 BRD4O60885 1362 aaPredicted RBP19.07■□□□□ 0.64
NCAPD3-213ENST00000534532 ADAMTS8Q9UP79 889 aa19.07■□□□□ 0.64
NCAPD3-213ENST00000534532 NINLQ9Y2I6 1382 aa19.06■□□□□ 0.64
NCAPD3-213ENST00000534532 A0A0U1RQG5 324 aaPredicted RBP19.06■□□□□ 0.64
NCAPD3-213ENST00000534532 TWISTNBQ3B726 338 aaPredicted RBP19.06■□□□□ 0.64
NCAPD3-213ENST00000534532 FSD1Q9BTV5 496 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms