RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 C8orf37Q96NL8 207 aa12.48□□□□□ -0.41
RPUSD4-209ENST00000534393 ORAI2Q96SN7 254 aa12.48□□□□□ -0.41
RPUSD4-209ENST00000534393 KNDC1Q76NI1 1749 aa12.48□□□□□ -0.41
RPUSD4-209ENST00000534393 NPHP3Q7Z494 1330 aa12.47□□□□□ -0.41
RPUSD4-209ENST00000534393 ADGRF5Q8IZF2 1346 aa12.47□□□□□ -0.41
RPUSD4-209ENST00000534393 UPF1Q92900 1129 aaKnown RBP eCLIP12.47□□□□□ -0.41
RPUSD4-209ENST00000534393 QTRT2Q9H974 415 aaKnown RBP12.47□□□□□ -0.41
RPUSD4-209ENST00000534393 TECPR2O15040 1411 aa12.46□□□□□ -0.41
RPUSD4-209ENST00000534393 LRPPRCP42704 1394 aaKnown RBP12.46□□□□□ -0.41
RPUSD4-209ENST00000534393 ABCC11Q96J66 1382 aa12.46□□□□□ -0.41
RPUSD4-209ENST00000534393 ESCO1Q5FWF5 840 aa12.46□□□□□ -0.41
RPUSD4-209ENST00000534393 COL22A1Q8NFW1 1626 aaPredicted RBP12.46□□□□□ -0.41
RPUSD4-209ENST00000534393 ADAMTS2O95450 1211 aa12.45□□□□□ -0.42
RPUSD4-209ENST00000534393 MARF1Q9Y4F3 1742 aaKnown RBP12.45□□□□□ -0.42
RPUSD4-209ENST00000534393 SIRT1Q96EB6 747 aa12.44□□□□□ -0.42
RPUSD4-209ENST00000534393 STK26Q9P289 416 aa12.44□□□□□ -0.42
RPUSD4-209ENST00000534393 PIK3C2GO75747 1445 aa12.44□□□□□ -0.42
RPUSD4-209ENST00000534393 USP21Q9UK80 565 aa12.43□□□□□ -0.42
RPUSD4-209ENST00000534393 FMN2Q9NZ56 1722 aa12.42□□□□□ -0.42
RPUSD4-209ENST00000534393 KIF1AQ12756 1690 aa12.42□□□□□ -0.42
RPUSD4-209ENST00000534393 WAPLQ7Z5K2 1190 aa12.42□□□□□ -0.42
RPUSD4-209ENST00000534393 FNBP4Q8N3X1 1017 aaPredicted RBP12.42□□□□□ -0.42
RPUSD4-209ENST00000534393 TRPC5Q9UL62 973 aaPredicted RBP12.42□□□□□ -0.42
RPUSD4-209ENST00000534393 YTHDC2Q9H6S0 1430 aaKnown RBP12.42□□□□□ -0.42
RPUSD4-209ENST00000534393 PXDNQ92626 1479 aa12.41□□□□□ -0.42
RPUSD4-209ENST00000534393 FOXO3O43524 673 aa12.41□□□□□ -0.42
RPUSD4-209ENST00000534393 TMEM132EQ6IEE7 984 aa12.41□□□□□ -0.42
RPUSD4-209ENST00000534393 C14orf93Q9H972 538 aaKnown RBP12.41□□□□□ -0.42
RPUSD4-209ENST00000534393 DHX57Q6P158 1386 aaKnown RBP12.41□□□□□ -0.42
RPUSD4-209ENST00000534393 RGPD8O14715 1765 aaPredicted RBP12.41□□□□□ -0.42
RPUSD4-209ENST00000534393 RGS12O14924 1447 aa12.4□□□□□ -0.42
RPUSD4-209ENST00000534393 MYOM2P54296 1465 aa12.4□□□□□ -0.43
RPUSD4-209ENST00000534393 ATAD2Q6PL18 1390 aa12.38□□□□□ -0.43
RPUSD4-209ENST00000534393 NRXN1Q9ULB1 1477 aa12.38□□□□□ -0.43
RPUSD4-209ENST00000534393 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.37□□□□□ -0.43
RPUSD4-209ENST00000534393 NUTM2FA1L443 756 aa12.37□□□□□ -0.43
RPUSD4-209ENST00000534393 ATRNO75882 1429 aa12.37□□□□□ -0.43
RPUSD4-209ENST00000534393 PLEKHH1Q9ULM0 1364 aa12.36□□□□□ -0.43
RPUSD4-209ENST00000534393 XPCQ01831 940 aaPredicted RBP12.36□□□□□ -0.43
RPUSD4-209ENST00000534393 PSME1Q06323 249 aa12.36□□□□□ -0.43
RPUSD4-209ENST00000534393 STAC3Q96MF2 364 aa12.36□□□□□ -0.43
RPUSD4-209ENST00000534393 SPATA31A3Q5VYP0 1347 aa12.36□□□□□ -0.43
RPUSD4-209ENST00000534393 RAB3GAP2Q9H2M9 1393 aa12.35□□□□□ -0.43
RPUSD4-209ENST00000534393 CFAP70Q5T0N1 1121 aa12.35□□□□□ -0.43
RPUSD4-209ENST00000534393 KRT28Q7Z3Y7 464 aa12.35□□□□□ -0.43
RPUSD4-209ENST00000534393 BCL9LQ86UU0 1499 aa12.34□□□□□ -0.43
RPUSD4-209ENST00000534393 DLC1Q96QB1 1528 aa12.34□□□□□ -0.43
RPUSD4-209ENST00000534393 POGKQ9P215 609 aa12.34□□□□□ -0.43
RPUSD4-209ENST00000534393 PHF8Q9UPP1 1060 aa12.34□□□□□ -0.43
RPUSD4-209ENST00000534393 CCDC125Q86Z20 511 aa12.33□□□□□ -0.44
RPUSD4-209ENST00000534393 GJD4Q96KN9 370 aaPredicted RBP12.33□□□□□ -0.44
RPUSD4-209ENST00000534393 PRAM1Q96QH2 718 aa12.33□□□□□ -0.44
RPUSD4-209ENST00000534393 ANKARQ7Z5J8 1434 aa12.32□□□□□ -0.44
RPUSD4-209ENST00000534393 HRCP23327 699 aa12.32□□□□□ -0.44
RPUSD4-209ENST00000534393 HAP1P54257 671 aaPredicted RBP12.32□□□□□ -0.44
RPUSD4-209ENST00000534393 UNC5CLQ8IV45 518 aa12.32□□□□□ -0.44
RPUSD4-209ENST00000534393 USP32Q8NFA0 1604 aa12.32□□□□□ -0.44
RPUSD4-209ENST00000534393 SBNO1A3KN83 1393 aa12.31□□□□□ -0.44
RPUSD4-209ENST00000534393 EIF3AQ14152 1382 aaKnown RBP12.31□□□□□ -0.44
RPUSD4-209ENST00000534393 NWD2Q9ULI1 1742 aa12.31□□□□□ -0.44
RPUSD4-209ENST00000534393 ADGRB2O60241 1585 aa12.31□□□□□ -0.44
RPUSD4-209ENST00000534393 TNS3Q68CZ2 1445 aa12.31□□□□□ -0.44
RPUSD4-209ENST00000534393 EP400Q96L91 3159 aa12.31□□□□□ -0.44
RPUSD4-209ENST00000534393 ARHGEF10O15013 1369 aa12.3□□□□□ -0.44
RPUSD4-209ENST00000534393 SAFB2Q14151 953 aaKnown RBP eCLIP12.3□□□□□ -0.44
RPUSD4-209ENST00000534393 SLIT2O94813 1529 aa12.3□□□□□ -0.44
RPUSD4-209ENST00000534393 ADGRB1O14514 1584 aa12.29□□□□□ -0.44
RPUSD4-209ENST00000534393 ABCA3Q99758 1704 aa12.28□□□□□ -0.44
RPUSD4-209ENST00000534393 LMOD2Q6P5Q4 547 aa12.28□□□□□ -0.44
RPUSD4-209ENST00000534393 DCAF11Q8TEB1 546 aa12.28□□□□□ -0.44
RPUSD4-209ENST00000534393 TRAK1Q9UPV9 953 aa12.28□□□□□ -0.44
RPUSD4-209ENST00000534393 BRWD3Q6RI45 1802 aa12.27□□□□□ -0.44
RPUSD4-209ENST00000534393 PLCH1Q4KWH8 1693 aa12.27□□□□□ -0.45
RPUSD4-209ENST00000534393 KDM2AQ9Y2K7 1162 aa12.27□□□□□ -0.45
RPUSD4-209ENST00000534393 ITSN1Q15811 1721 aa12.27□□□□□ -0.45
RPUSD4-209ENST00000534393 GPRASP1Q5JY77 1395 aa12.27□□□□□ -0.45
RPUSD4-209ENST00000534393 RALGAPBQ86X10 1494 aa12.27□□□□□ -0.45
RPUSD4-209ENST00000534393 GLI3P10071 1580 aa12.26□□□□□ -0.45
RPUSD4-209ENST00000534393 VPS72Q15906 364 aa12.26□□□□□ -0.45
RPUSD4-209ENST00000534393 TRPM3Q9HCF6 1732 aaPredicted RBP12.25□□□□□ -0.45
RPUSD4-209ENST00000534393 PMFBP1Q8TBY8 1022 aa12.25□□□□□ -0.45
RPUSD4-209ENST00000534393 CABLES1Q8TDN4 633 aa12.25□□□□□ -0.45
RPUSD4-209ENST00000534393 ZRANB1Q9UGI0 708 aa12.25□□□□□ -0.45
RPUSD4-209ENST00000534393 TULP4Q9NRJ4 1543 aa12.25□□□□□ -0.45
RPUSD4-209ENST00000534393 ALS2Q96Q42 1657 aa12.25□□□□□ -0.45
RPUSD4-209ENST00000534393 WASLO00401 505 aaPredicted RBP12.24□□□□□ -0.45
RPUSD4-209ENST00000534393 ARHGEF28Q8N1W1 1705 aaKnown RBP12.24□□□□□ -0.45
RPUSD4-209ENST00000534393 MINK1Q8N4C8 1332 aaPredicted RBP12.24□□□□□ -0.45
RPUSD4-209ENST00000534393 CCDC9Q9Y3X0 531 aaKnown RBP12.24□□□□□ -0.45
RPUSD4-209ENST00000534393 KIAA1210Q9ULL0 1709 aa12.23□□□□□ -0.45
RPUSD4-209ENST00000534393 ONECUT3O60422 494 aaPredicted RBP12.23□□□□□ -0.45
RPUSD4-209ENST00000534393 NGDNQ8NEJ9 315 aaKnown RBP12.23□□□□□ -0.45
RPUSD4-209ENST00000534393 HIRIP3Q9BW71 556 aaPredicted RBP12.23□□□□□ -0.45
RPUSD4-209ENST00000534393 COL14A1Q05707 1796 aaKnown RBP12.23□□□□□ -0.45
RPUSD4-209ENST00000534393 BLMP54132 1417 aaPredicted RBP12.22□□□□□ -0.45
RPUSD4-209ENST00000534393 SF3B2Q13435 895 aaKnown RBP12.22□□□□□ -0.45
RPUSD4-209ENST00000534393 SEPT12Q8IYM1 358 aa12.22□□□□□ -0.45
RPUSD4-209ENST00000534393 FAM83GA6ND36 823 aa12.21□□□□□ -0.45
RPUSD4-209ENST00000534393 PLEKHG5O94827 1062 aa12.21□□□□□ -0.45
RPUSD4-209ENST00000534393 NRAPQ86VF7 1730 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms