RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 RIC3Q7Z5B4 369 aa9.1□□□□□ -0.95
ATPAF1-211ENST00000534216 FAM160A2Q8N612 972 aaPredicted RBP9.09□□□□□ -0.95
ATPAF1-211ENST00000534216 S1PR4O95977 384 aa9.08□□□□□ -0.96
ATPAF1-211ENST00000534216 IL27Q8NEV9 243 aa9.08□□□□□ -0.96
ATPAF1-211ENST00000534216 SYMPKQ92797 1274 aaKnown RBP9.08□□□□□ -0.96
ATPAF1-211ENST00000534216 USB1Q9BQ65 265 aaKnown RBP9.08□□□□□ -0.96
ATPAF1-211ENST00000534216 SLC6A16Q9GZN6 736 aa9.08□□□□□ -0.96
ATPAF1-211ENST00000534216 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.08□□□□□ -0.96
ATPAF1-211ENST00000534216 LIMD1Q9UGP4 676 aa9.08□□□□□ -0.96
ATPAF1-211ENST00000534216 PCDHB15Q9Y5E8 787 aa9.08□□□□□ -0.96
ATPAF1-211ENST00000534216 GGCXP38435 758 aa9.07□□□□□ -0.96
ATPAF1-211ENST00000534216 SH3D19Q5HYK7 790 aa9.07□□□□□ -0.96
ATPAF1-211ENST00000534216 POLR3EQ9NVU0 708 aa9.07□□□□□ -0.96
ATPAF1-211ENST00000534216 C6orf229H3BNL8 230 aa9.06□□□□□ -0.96
ATPAF1-211ENST00000534216 CLK2P49760 499 aaKnown RBP9.06□□□□□ -0.96
ATPAF1-211ENST00000534216 TUSC1Q2TAM9 212 aa9.06□□□□□ -0.96
ATPAF1-211ENST00000534216 MSS51Q4VC12 460 aa9.06□□□□□ -0.96
ATPAF1-211ENST00000534216 SKIV2LQ15477 1246 aaKnown RBP9.05□□□□□ -0.96
ATPAF1-211ENST00000534216 RETREG3Q86VR2 466 aa9.05□□□□□ -0.96
ATPAF1-211ENST00000534216 RNF223E7ERA6 249 aa9.04□□□□□ -0.96
ATPAF1-211ENST00000534216 MTMR2Q13614 643 aa9.04□□□□□ -0.96
ATPAF1-211ENST00000534216 CSPP1Q1MSJ5 1256 aa9.04□□□□□ -0.96
ATPAF1-211ENST00000534216 PRDM9Q9NQV7 894 aa9.04□□□□□ -0.96
ATPAF1-211ENST00000534216 SPDYE5A6NIY4 337 aa9.03□□□□□ -0.96
ATPAF1-211ENST00000534216 HRCP23327 699 aa9.03□□□□□ -0.96
ATPAF1-211ENST00000534216 PRPF38BQ5VTL8 546 aaKnown RBP9.03□□□□□ -0.96
ATPAF1-211ENST00000534216 ZBTB3Q9H5J0 574 aa9.03□□□□□ -0.96
ATPAF1-211ENST00000534216 PPEF1O14829 653 aaPredicted RBP9.02□□□□□ -0.97
ATPAF1-211ENST00000534216 MMP16P51512 607 aa9.02□□□□□ -0.97
ATPAF1-211ENST00000534216 QPCTQ16769 361 aa9.02□□□□□ -0.97
ATPAF1-211ENST00000534216 CABLES1Q8TDN4 633 aa9.02□□□□□ -0.97
ATPAF1-211ENST00000534216 GOPCQ9HD26 462 aa9.02□□□□□ -0.97
ATPAF1-211ENST00000534216 LILRB3O75022 631 aa9.01□□□□□ -0.97
ATPAF1-211ENST00000534216 DXOO77932 396 aaKnown RBP9.01□□□□□ -0.97
ATPAF1-211ENST00000534216 ANKLE1Q8NAG6 615 aa9.01□□□□□ -0.97
ATPAF1-211ENST00000534216 PROCA1Q8NCQ7 364 aaPredicted RBP9□□□□□ -0.97
ATPAF1-211ENST00000534216 PRR7Q8TB68 274 aa9□□□□□ -0.97
ATPAF1-211ENST00000534216 GNL3Q9BVP2 549 aaKnown RBP eCLIP9□□□□□ -0.97
ATPAF1-211ENST00000534216 NUTM2BA6NNL0 878 aaPredicted RBP8.99□□□□□ -0.97
ATPAF1-211ENST00000534216 NUTM2EB1AL46 878 aaPredicted RBP8.99□□□□□ -0.97
ATPAF1-211ENST00000534216 RGS20O76081 388 aa8.99□□□□□ -0.97
ATPAF1-211ENST00000534216 JUNDP17535 347 aa8.99□□□□□ -0.97
ATPAF1-211ENST00000534216 NUTM2DQ5VT03 806 aaPredicted RBP8.99□□□□□ -0.97
ATPAF1-211ENST00000534216 NUTM2AQ8IVF1 878 aaPredicted RBP8.99□□□□□ -0.97
ATPAF1-211ENST00000534216 CFAP99D6REC4 459 aa8.98□□□□□ -0.97
ATPAF1-211ENST00000534216 FCF1Q9Y324 198 aaKnown RBP8.98□□□□□ -0.97
ATPAF1-211ENST00000534216 RTL5Q5HYW3 569 aaPredicted RBP8.97□□□□□ -0.97
ATPAF1-211ENST00000534216 DESI1Q6ICB0 168 aa8.97□□□□□ -0.97
ATPAF1-211ENST00000534216 PCMTD1Q96MG8 357 aaPredicted RBP8.97□□□□□ -0.97
ATPAF1-211ENST00000534216 ATP1B4Q9UN42 357 aaPredicted RBP8.97□□□□□ -0.97
ATPAF1-211ENST00000534216 PLA2G2CQ5R387 149 aa8.96□□□□□ -0.98
ATPAF1-211ENST00000534216 FBXO31Q5XUX0 539 aaPredicted RBP8.96□□□□□ -0.98
ATPAF1-211ENST00000534216 EMID1Q96A84 441 aaPredicted RBP8.95□□□□□ -0.98
ATPAF1-211ENST00000534216 PRKD2Q9BZL6 878 aa8.95□□□□□ -0.98
ATPAF1-211ENST00000534216 PPP2R2DQ66LE6 453 aa8.94□□□□□ -0.98
ATPAF1-211ENST00000534216 V9GY48 417 aaPredicted RBP8.94□□□□□ -0.98
ATPAF1-211ENST00000534216 SLC19A1P41440 591 aa8.93□□□□□ -0.98
ATPAF1-211ENST00000534216 PTPRNQ16849 979 aa8.93□□□□□ -0.98
ATPAF1-211ENST00000534216 LIAT1Q6ZQX7 453 aa8.93□□□□□ -0.98
ATPAF1-211ENST00000534216 LYPD8Q6UX82 237 aa8.92□□□□□ -0.98
ATPAF1-211ENST00000534216 TSC1Q92574 1164 aa8.92□□□□□ -0.98
ATPAF1-211ENST00000534216 NUDT12Q9BQG2 462 aa8.92□□□□□ -0.98
ATPAF1-211ENST00000534216 CCDC24Q8N4L8 307 aa8.91□□□□□ -0.98
ATPAF1-211ENST00000534216 HELBQ8NG08 1087 aaPredicted RBP8.91□□□□□ -0.98
ATPAF1-211ENST00000534216 CCNYL3P0C7X3 344 aa8.9□□□□□ -0.98
ATPAF1-211ENST00000534216 PER1O15534 1290 aaPredicted RBP8.89□□□□□ -0.99
ATPAF1-211ENST00000534216 RFC5P40937 340 aa8.89□□□□□ -0.99
ATPAF1-211ENST00000534216 RPIAP49247 311 aa8.89□□□□□ -0.99
ATPAF1-211ENST00000534216 EVA1BQ9NVM1 165 aa8.89□□□□□ -0.99
ATPAF1-211ENST00000534216 ZBTB24O43167 697 aaPredicted RBP8.88□□□□□ -0.99
ATPAF1-211ENST00000534216 SPRYD7Q5W111 196 aa8.88□□□□□ -0.99
ATPAF1-211ENST00000534216 CTDSPL2Q05D32 466 aa8.87□□□□□ -0.99
ATPAF1-211ENST00000534216 PTCRAQ6ISU1 281 aaPredicted RBP8.87□□□□□ -0.99
ATPAF1-211ENST00000534216 IRX2Q9BZI1 471 aaPredicted RBP8.87□□□□□ -0.99
ATPAF1-211ENST00000534216 AP1G2O75843 785 aa8.86□□□□□ -0.99
ATPAF1-211ENST00000534216 KCNH2Q12809 1159 aa8.86□□□□□ -0.99
ATPAF1-211ENST00000534216 CD2BP2O95400 341 aaKnown RBP8.85□□□□□ -0.99
ATPAF1-211ENST00000534216 F12P00748 615 aaPredicted RBP8.85□□□□□ -0.99
ATPAF1-211ENST00000534216 TRIM32Q13049 653 aa8.85□□□□□ -0.99
ATPAF1-211ENST00000534216 ZNF598Q86UK7 904 aaKnown RBP8.85□□□□□ -0.99
ATPAF1-211ENST00000534216 TMEM259Q4ZIN3 620 aa8.84□□□□□ -0.99
ATPAF1-211ENST00000534216 MAP10Q9P2G4 905 aa8.84□□□□□ -0.99
ATPAF1-211ENST00000534216 CTHP32929 405 aa8.83□□□□□ -1
ATPAF1-211ENST00000534216 ZNF697Q5TEC3 545 aa8.83□□□□□ -1
ATPAF1-211ENST00000534216 LRRN4Q8WUT4 740 aa8.83□□□□□ -1
ATPAF1-211ENST00000534216 UNC93B1Q9H1C4 597 aa8.83□□□□□ -1
ATPAF1-211ENST00000534216 USP17L8P0C7I0 530 aa8.82□□□□□ -1
ATPAF1-211ENST00000534216 TMEM132AQ24JP5 1023 aa8.82□□□□□ -1
ATPAF1-211ENST00000534216 WNT7BP56706 349 aa8.79□□□□□ -1
ATPAF1-211ENST00000534216 SKOR1P84550 965 aa8.79□□□□□ -1
ATPAF1-211ENST00000534216 TRIM67Q6ZTA4 783 aa8.79□□□□□ -1
ATPAF1-211ENST00000534216 BANK1Q8NDB2 785 aa8.78□□□□□ -1
ATPAF1-211ENST00000534216 BAP1Q92560 729 aa8.78□□□□□ -1
ATPAF1-211ENST00000534216 HMX1Q9NP08 348 aaPredicted RBP8.78□□□□□ -1
ATPAF1-211ENST00000534216 PKD2L1Q9P0L9 805 aa8.78□□□□□ -1
ATPAF1-211ENST00000534216 GDF9O60383 454 aa8.77□□□□□ -1.01
ATPAF1-211ENST00000534216 SH3BP2P78314 561 aa8.77□□□□□ -1.01
ATPAF1-211ENST00000534216 FOXC1Q12948 553 aa8.77□□□□□ -1.01
ATPAF1-211ENST00000534216 LINC01559Q495D7 138 aa8.77□□□□□ -1.01
ATPAF1-211ENST00000534216 WNT7AO00755 349 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms