RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 FNBP4Q8N3X1 1017 aaPredicted RBP31.99■■■□□ 2.71
SSH3-211ENST00000534112 RGL3Q3MIN7 710 aa31.97■■■□□ 2.71
SSH3-211ENST00000534112 TRPC5Q9UL62 973 aaPredicted RBP31.97■■■□□ 2.71
SSH3-211ENST00000534112 NPHP3Q7Z494 1330 aa31.97■■■□□ 2.71
SSH3-211ENST00000534112 PPLO60437 1756 aa31.96■■■□□ 2.71
SSH3-211ENST00000534112 STK26Q9P289 416 aa31.95■■■□□ 2.71
SSH3-211ENST00000534112 FOXO3O43524 673 aa31.93■■■□□ 2.7
SSH3-211ENST00000534112 WAPLQ7Z5K2 1190 aa31.93■■■□□ 2.7
SSH3-211ENST00000534112 CCDC144AA2RUR9 1427 aa31.92■■■□□ 2.7
SSH3-211ENST00000534112 CDC42BPGQ6DT37 1551 aa31.9■■■□□ 2.7
SSH3-211ENST00000534112 XPCQ01831 940 aaPredicted RBP31.9■■■□□ 2.7
SSH3-211ENST00000534112 ANKRD30BQ9BXX2 1392 aa31.9■■■□□ 2.7
SSH3-211ENST00000534112 SPATA31E1Q6ZUB1 1445 aa31.9■■■□□ 2.7
SSH3-211ENST00000534112 MPHOSPH9Q99550 1183 aa31.89■■■□□ 2.7
SSH3-211ENST00000534112 LRPPRCP42704 1394 aaKnown RBP31.89■■■□□ 2.7
SSH3-211ENST00000534112 MYOM2P54296 1465 aa31.89■■■□□ 2.7
SSH3-211ENST00000534112 NUTM2FA1L443 756 aa31.88■■■□□ 2.69
SSH3-211ENST00000534112 TMEM132EQ6IEE7 984 aa31.88■■■□□ 2.69
SSH3-211ENST00000534112 ATAD2Q6PL18 1390 aa31.88■■■□□ 2.69
SSH3-211ENST00000534112 TECPR2O15040 1411 aa31.88■■■□□ 2.69
SSH3-211ENST00000534112 PXDNQ92626 1479 aa31.87■■■□□ 2.69
SSH3-211ENST00000534112 ATRNO75882 1429 aa31.87■■■□□ 2.69
SSH3-211ENST00000534112 ABCC11Q96J66 1382 aa31.87■■■□□ 2.69
SSH3-211ENST00000534112 COL22A1Q8NFW1 1626 aaPredicted RBP31.86■■■□□ 2.69
SSH3-211ENST00000534112 PLEKHH1Q9ULM0 1364 aa31.83■■■□□ 2.69
SSH3-211ENST00000534112 SRCAPQ6ZRS2 3230 aa31.82■■■□□ 2.68
SSH3-211ENST00000534112 BCL9LQ86UU0 1499 aa31.82■■■□□ 2.68
SSH3-211ENST00000534112 PIK3C2GO75747 1445 aa31.78■■■□□ 2.68
SSH3-211ENST00000534112 GJD4Q96KN9 370 aaPredicted RBP31.76■■■□□ 2.67
SSH3-211ENST00000534112 YTHDC2Q9H6S0 1430 aaKnown RBP31.75■■■□□ 2.67
SSH3-211ENST00000534112 SIRT1Q96EB6 747 aa31.75■■■□□ 2.67
SSH3-211ENST00000534112 SPATA31A3Q5VYP0 1347 aa31.75■■■□□ 2.67
SSH3-211ENST00000534112 C14orf93Q9H972 538 aaKnown RBP31.73■■■□□ 2.67
SSH3-211ENST00000534112 KRT28Q7Z3Y7 464 aa31.72■■■□□ 2.67
SSH3-211ENST00000534112 EP400Q96L91 3159 aa31.71■■■□□ 2.67
SSH3-211ENST00000534112 IFT172Q9UG01 1749 aa31.7■■■□□ 2.67
SSH3-211ENST00000534112 UNC5CLQ8IV45 518 aa31.7■■■□□ 2.67
SSH3-211ENST00000534112 CCDC125Q86Z20 511 aa31.68■■■□□ 2.66
SSH3-211ENST00000534112 KNDC1Q76NI1 1749 aa31.67■■■□□ 2.66
SSH3-211ENST00000534112 CFAP70Q5T0N1 1121 aa31.67■■■□□ 2.66
SSH3-211ENST00000534112 PHF8Q9UPP1 1060 aa31.66■■■□□ 2.66
SSH3-211ENST00000534112 DHX57Q6P158 1386 aaKnown RBP31.65■■■□□ 2.66
SSH3-211ENST00000534112 SLIT2O94813 1529 aa31.65■■■□□ 2.66
SSH3-211ENST00000534112 FMN2Q9NZ56 1722 aa31.64■■■□□ 2.66
SSH3-211ENST00000534112 ZRANB1Q9UGI0 708 aa31.64■■■□□ 2.66
SSH3-211ENST00000534112 ACIN1Q9UKV3 1341 aaKnown RBP31.64■■■□□ 2.66
SSH3-211ENST00000534112 PSME1Q06323 249 aa31.63■■■□□ 2.65
SSH3-211ENST00000534112 MARF1Q9Y4F3 1742 aaKnown RBP31.63■■■□□ 2.65
SSH3-211ENST00000534112 NRXN1Q9ULB1 1477 aa31.61■■■□□ 2.65
SSH3-211ENST00000534112 SAFB2Q14151 953 aaKnown RBP eCLIP31.61■■■□□ 2.65
SSH3-211ENST00000534112 PRAM1Q96QH2 718 aa31.61■■■□□ 2.65
SSH3-211ENST00000534112 KIF1AQ12756 1690 aa31.6■■■□□ 2.65
SSH3-211ENST00000534112 RALGAPBQ86X10 1494 aa31.6■■■□□ 2.65
SSH3-211ENST00000534112 HAP1P54257 671 aaPredicted RBP31.6■■■□□ 2.65
SSH3-211ENST00000534112 CABLES1Q8TDN4 633 aa31.59■■■□□ 2.65
SSH3-211ENST00000534112 TNS3Q68CZ2 1445 aa31.58■■■□□ 2.65
SSH3-211ENST00000534112 PLEKHG5O94827 1062 aa31.56■■■□□ 2.64
SSH3-211ENST00000534112 SBNO1A3KN83 1393 aa31.56■■■□□ 2.64
SSH3-211ENST00000534112 LMOD2Q6P5Q4 547 aa31.55■■■□□ 2.64
SSH3-211ENST00000534112 GLI3P10071 1580 aa31.55■■■□□ 2.64
SSH3-211ENST00000534112 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.55■■■□□ 2.64
SSH3-211ENST00000534112 POGKQ9P215 609 aa31.54■■■□□ 2.64
SSH3-211ENST00000534112 USP32Q8NFA0 1604 aa31.53■■■□□ 2.64
SSH3-211ENST00000534112 VPS72Q15906 364 aa31.53■■■□□ 2.64
SSH3-211ENST00000534112 SEPT12Q8IYM1 358 aa31.52■■■□□ 2.64
SSH3-211ENST00000534112 PMFBP1Q8TBY8 1022 aa31.51■■■□□ 2.63
SSH3-211ENST00000534112 ARHGEF10O15013 1369 aa31.51■■■□□ 2.63
SSH3-211ENST00000534112 BLMP54132 1417 aaPredicted RBP31.49■■■□□ 2.63
SSH3-211ENST00000534112 ONECUT3O60422 494 aaPredicted RBP31.48■■■□□ 2.63
SSH3-211ENST00000534112 CCDC9Q9Y3X0 531 aaKnown RBP31.48■■■□□ 2.63
SSH3-211ENST00000534112 FAM83GA6ND36 823 aa31.47■■■□□ 2.63
SSH3-211ENST00000534112 RGPD8O14715 1765 aaPredicted RBP31.47■■■□□ 2.63
SSH3-211ENST00000534112 ANKARQ7Z5J8 1434 aa31.47■■■□□ 2.63
SSH3-211ENST00000534112 DLC1Q96QB1 1528 aa31.46■■■□□ 2.63
SSH3-211ENST00000534112 TRAK1Q9UPV9 953 aa31.45■■■□□ 2.63
SSH3-211ENST00000534112 HIRIP3Q9BW71 556 aaPredicted RBP31.44■■■□□ 2.62
SSH3-211ENST00000534112 DEFB132Q7Z7B7 95 aa31.43■■■□□ 2.62
SSH3-211ENST00000534112 RAB3GAP2Q9H2M9 1393 aa31.43■■■□□ 2.62
SSH3-211ENST00000534112 SF3B2Q13435 895 aaKnown RBP31.41■■■□□ 2.62
SSH3-211ENST00000534112 KRT27Q7Z3Y8 459 aa31.4■■■□□ 2.62
SSH3-211ENST00000534112 MINK1Q8N4C8 1332 aaPredicted RBP31.4■■■□□ 2.62
SSH3-211ENST00000534112 ADGRB1O14514 1584 aa31.39■■■□□ 2.62
SSH3-211ENST00000534112 KDM2AQ9Y2K7 1162 aa31.39■■■□□ 2.62
SSH3-211ENST00000534112 GPRASP1Q5JY77 1395 aa31.38■■■□□ 2.61
SSH3-211ENST00000534112 PRR36Q9H6K5 1346 aa31.37■■■□□ 2.61
SSH3-211ENST00000534112 ADGRB2O60241 1585 aa31.36■■■□□ 2.61
SSH3-211ENST00000534112 DCAF11Q8TEB1 546 aa31.36■■■□□ 2.61
SSH3-211ENST00000534112 BRWD3Q6RI45 1802 aa31.35■■■□□ 2.61
SSH3-211ENST00000534112 NWD2Q9ULI1 1742 aa31.35■■■□□ 2.61
SSH3-211ENST00000534112 WASLO00401 505 aaPredicted RBP31.35■■■□□ 2.61
SSH3-211ENST00000534112 BTG4Q9NY30 223 aa31.35■■■□□ 2.61
SSH3-211ENST00000534112 EIF3AQ14152 1382 aaKnown RBP31.34■■■□□ 2.61
SSH3-211ENST00000534112 PLCH1Q4KWH8 1693 aa31.34■■■□□ 2.61
SSH3-211ENST00000534112 A0A0G2JS52 829 aa31.32■■■□□ 2.6
SSH3-211ENST00000534112 MYT1Q01538 1121 aa31.32■■■□□ 2.6
SSH3-211ENST00000534112 FAM98CQ17RN3 349 aaKnown RBP31.32■■■□□ 2.6
SSH3-211ENST00000534112 ABCA3Q99758 1704 aa31.32■■■□□ 2.6
SSH3-211ENST00000534112 NGDNQ8NEJ9 315 aaKnown RBP31.31■■■□□ 2.6
SSH3-211ENST00000534112 STAC3Q96MF2 364 aa31.31■■■□□ 2.6
SSH3-211ENST00000534112 TULP4Q9NRJ4 1543 aa31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms