RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 ANKRD30BQ9BXX2 1392 aa25.16■■□□□ 1.62
CAPRIN1-216ENST00000534042 SPATA31E1Q6ZUB1 1445 aa25.15■■□□□ 1.62
CAPRIN1-216ENST00000534042 STK26Q9P289 416 aa25.15■■□□□ 1.62
CAPRIN1-216ENST00000534042 RBM6P78332 1123 aaKnown RBP25.14■■□□□ 1.62
CAPRIN1-216ENST00000534042 ESCO1Q5FWF5 840 aa25.13■■□□□ 1.61
CAPRIN1-216ENST00000534042 CDC42BPGQ6DT37 1551 aa25.12■■□□□ 1.61
CAPRIN1-216ENST00000534042 IFT172Q9UG01 1749 aa25.11■■□□□ 1.61
CAPRIN1-216ENST00000534042 NPHP3Q7Z494 1330 aa25.11■■□□□ 1.61
CAPRIN1-216ENST00000534042 LRPPRCP42704 1394 aaKnown RBP25.1■■□□□ 1.61
CAPRIN1-216ENST00000534042 WAPLQ7Z5K2 1190 aa25.1■■□□□ 1.61
CAPRIN1-216ENST00000534042 TECPR2O15040 1411 aa25.09■■□□□ 1.61
CAPRIN1-216ENST00000534042 ABCC11Q96J66 1382 aa25.08■■□□□ 1.61
CAPRIN1-216ENST00000534042 TMEM132EQ6IEE7 984 aa25.08■■□□□ 1.61
CAPRIN1-216ENST00000534042 ACIN1Q9UKV3 1341 aaKnown RBP25.08■■□□□ 1.6
CAPRIN1-216ENST00000534042 RGS12O14924 1447 aa25.07■■□□□ 1.6
CAPRIN1-216ENST00000534042 FOXO3O43524 673 aa25.06■■□□□ 1.6
CAPRIN1-216ENST00000534042 USP21Q9UK80 565 aa25.06■■□□□ 1.6
CAPRIN1-216ENST00000534042 PIK3C2GO75747 1445 aa25.05■■□□□ 1.6
CAPRIN1-216ENST00000534042 NUTM2FA1L443 756 aa25.05■■□□□ 1.6
CAPRIN1-216ENST00000534042 COL22A1Q8NFW1 1626 aaPredicted RBP25.04■■□□□ 1.6
CAPRIN1-216ENST00000534042 KNDC1Q76NI1 1749 aa25.04■■□□□ 1.6
CAPRIN1-216ENST00000534042 XPCQ01831 940 aaPredicted RBP25.03■■□□□ 1.6
CAPRIN1-216ENST00000534042 FNBP4Q8N3X1 1017 aaPredicted RBP25.03■■□□□ 1.6
CAPRIN1-216ENST00000534042 TRPC5Q9UL62 973 aaPredicted RBP25.03■■□□□ 1.6
CAPRIN1-216ENST00000534042 PLEKHH1Q9ULM0 1364 aa25.03■■□□□ 1.6
CAPRIN1-216ENST00000534042 PXDNQ92626 1479 aa25.02■■□□□ 1.6
CAPRIN1-216ENST00000534042 YTHDC2Q9H6S0 1430 aaKnown RBP25.02■■□□□ 1.6
CAPRIN1-216ENST00000534042 MYOM2P54296 1465 aa25■■□□□ 1.59
CAPRIN1-216ENST00000534042 C14orf93Q9H972 538 aaKnown RBP24.99■■□□□ 1.59
CAPRIN1-216ENST00000534042 SIRT1Q96EB6 747 aa24.98■■□□□ 1.59
CAPRIN1-216ENST00000534042 FMN2Q9NZ56 1722 aa24.97■■□□□ 1.59
CAPRIN1-216ENST00000534042 ATRNO75882 1429 aa24.95■■□□□ 1.59
CAPRIN1-216ENST00000534042 DHX57Q6P158 1386 aaKnown RBP24.95■■□□□ 1.59
CAPRIN1-216ENST00000534042 CFAP70Q5T0N1 1121 aa24.95■■□□□ 1.58
CAPRIN1-216ENST00000534042 MARF1Q9Y4F3 1742 aaKnown RBP24.94■■□□□ 1.58
CAPRIN1-216ENST00000534042 NRXN1Q9ULB1 1477 aa24.93■■□□□ 1.58
CAPRIN1-216ENST00000534042 ATAD2Q6PL18 1390 aa24.93■■□□□ 1.58
CAPRIN1-216ENST00000534042 KIF1AQ12756 1690 aa24.92■■□□□ 1.58
CAPRIN1-216ENST00000534042 SPATA31A3Q5VYP0 1347 aa24.91■■□□□ 1.58
CAPRIN1-216ENST00000534042 KRT28Q7Z3Y7 464 aa24.91■■□□□ 1.58
CAPRIN1-216ENST00000534042 BCL9LQ86UU0 1499 aa24.9■■□□□ 1.58
CAPRIN1-216ENST00000534042 RGPD8O14715 1765 aaPredicted RBP24.9■■□□□ 1.58
CAPRIN1-216ENST00000534042 PHF8Q9UPP1 1060 aa24.89■■□□□ 1.58
CAPRIN1-216ENST00000534042 RAB3GAP2Q9H2M9 1393 aa24.89■■□□□ 1.57
CAPRIN1-216ENST00000534042 SAFB2Q14151 953 aaKnown RBP eCLIP24.88■■□□□ 1.57
CAPRIN1-216ENST00000534042 PRAM1Q96QH2 718 aa24.88■■□□□ 1.57
CAPRIN1-216ENST00000534042 PSME1Q06323 249 aa24.86■■□□□ 1.57
CAPRIN1-216ENST00000534042 GJD4Q96KN9 370 aaPredicted RBP24.86■■□□□ 1.57
CAPRIN1-216ENST00000534042 POGKQ9P215 609 aa24.86■■□□□ 1.57
CAPRIN1-216ENST00000534042 HAP1P54257 671 aaPredicted RBP24.83■■□□□ 1.57
CAPRIN1-216ENST00000534042 UNC5CLQ8IV45 518 aa24.83■■□□□ 1.57
CAPRIN1-216ENST00000534042 TNS3Q68CZ2 1445 aa24.82■■□□□ 1.56
CAPRIN1-216ENST00000534042 DLC1Q96QB1 1528 aa24.81■■□□□ 1.56
CAPRIN1-216ENST00000534042 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.81■■□□□ 1.56
CAPRIN1-216ENST00000534042 SLIT2O94813 1529 aa24.81■■□□□ 1.56
CAPRIN1-216ENST00000534042 USP32Q8NFA0 1604 aa24.79■■□□□ 1.56
CAPRIN1-216ENST00000534042 LMOD2Q6P5Q4 547 aa24.79■■□□□ 1.56
CAPRIN1-216ENST00000534042 SBNO1A3KN83 1393 aa24.79■■□□□ 1.56
CAPRIN1-216ENST00000534042 PLEKHG5O94827 1062 aa24.78■■□□□ 1.56
CAPRIN1-216ENST00000534042 CABLES1Q8TDN4 633 aa24.78■■□□□ 1.56
CAPRIN1-216ENST00000534042 TRAK1Q9UPV9 953 aa24.78■■□□□ 1.56
CAPRIN1-216ENST00000534042 KDM2AQ9Y2K7 1162 aa24.78■■□□□ 1.56
CAPRIN1-216ENST00000534042 ANKARQ7Z5J8 1434 aa24.78■■□□□ 1.56
CAPRIN1-216ENST00000534042 PMFBP1Q8TBY8 1022 aa24.77■■□□□ 1.56
CAPRIN1-216ENST00000534042 ADGRB1O14514 1584 aa24.76■■□□□ 1.55
CAPRIN1-216ENST00000534042 CCDC125Q86Z20 511 aa24.76■■□□□ 1.55
CAPRIN1-216ENST00000534042 DCAF11Q8TEB1 546 aa24.76■■□□□ 1.55
CAPRIN1-216ENST00000534042 ARHGEF10O15013 1369 aa24.76■■□□□ 1.55
CAPRIN1-216ENST00000534042 RALGAPBQ86X10 1494 aa24.76■■□□□ 1.55
CAPRIN1-216ENST00000534042 HIRIP3Q9BW71 556 aaPredicted RBP24.74■■□□□ 1.55
CAPRIN1-216ENST00000534042 ADGRB2O60241 1585 aa24.74■■□□□ 1.55
CAPRIN1-216ENST00000534042 GLI3P10071 1580 aa24.74■■□□□ 1.55
CAPRIN1-216ENST00000534042 MINK1Q8N4C8 1332 aaPredicted RBP24.73■■□□□ 1.55
CAPRIN1-216ENST00000534042 STAC3Q96MF2 364 aa24.73■■□□□ 1.55
CAPRIN1-216ENST00000534042 EIF3AQ14152 1382 aaKnown RBP24.71■■□□□ 1.55
CAPRIN1-216ENST00000534042 HRCP23327 699 aa24.7■■□□□ 1.54
CAPRIN1-216ENST00000534042 VPS72Q15906 364 aa24.7■■□□□ 1.54
CAPRIN1-216ENST00000534042 ZRANB1Q9UGI0 708 aa24.69■■□□□ 1.54
CAPRIN1-216ENST00000534042 CCDC9Q9Y3X0 531 aaKnown RBP24.69■■□□□ 1.54
CAPRIN1-216ENST00000534042 ABCA3Q99758 1704 aa24.69■■□□□ 1.54
CAPRIN1-216ENST00000534042 NWD2Q9ULI1 1742 aa24.69■■□□□ 1.54
CAPRIN1-216ENST00000534042 PLCH1Q4KWH8 1693 aa24.69■■□□□ 1.54
CAPRIN1-216ENST00000534042 GPRASP1Q5JY77 1395 aa24.68■■□□□ 1.54
CAPRIN1-216ENST00000534042 WASLO00401 505 aaPredicted RBP24.68■■□□□ 1.54
CAPRIN1-216ENST00000534042 BRWD3Q6RI45 1802 aa24.68■■□□□ 1.54
CAPRIN1-216ENST00000534042 PRR36Q9H6K5 1346 aa24.67■■□□□ 1.54
CAPRIN1-216ENST00000534042 SEPT12Q8IYM1 358 aa24.67■■□□□ 1.54
CAPRIN1-216ENST00000534042 FAM83GA6ND36 823 aa24.66■■□□□ 1.54
CAPRIN1-216ENST00000534042 TULP4Q9NRJ4 1543 aa24.66■■□□□ 1.54
CAPRIN1-216ENST00000534042 TRPM3Q9HCF6 1732 aaPredicted RBP24.65■■□□□ 1.54
CAPRIN1-216ENST00000534042 EP400Q96L91 3159 aa24.64■■□□□ 1.54
CAPRIN1-216ENST00000534042 BLMP54132 1417 aaPredicted RBP24.63■■□□□ 1.53
CAPRIN1-216ENST00000534042 NGDNQ8NEJ9 315 aaKnown RBP24.63■■□□□ 1.53
CAPRIN1-216ENST00000534042 ONECUT3O60422 494 aaPredicted RBP24.62■■□□□ 1.53
CAPRIN1-216ENST00000534042 ALS2Q96Q42 1657 aa24.61■■□□□ 1.53
CAPRIN1-216ENST00000534042 PAK3O75914 559 aaPredicted RBP24.59■■□□□ 1.53
CAPRIN1-216ENST00000534042 SF3B2Q13435 895 aaKnown RBP24.59■■□□□ 1.53
CAPRIN1-216ENST00000534042 KRT27Q7Z3Y8 459 aa24.59■■□□□ 1.53
CAPRIN1-216ENST00000534042 BTG4Q9NY30 223 aa24.59■■□□□ 1.53
CAPRIN1-216ENST00000534042 ARHGEF28Q8N1W1 1705 aaKnown RBP24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms