RNA–Protein interactions for RNA: ENST00000533997.5

ST3GAL3-238, Transcript of ST3 beta-galactoside alpha-2,3-sialyltransferase 3, human

TSL 1 (best)

Gene ST3GAL3, Length 1,007 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ST3GAL3-238	ENST00000533997	EIF3A	Q14152	1382 aa	Known RBP	13.18	□□□□□ -0.3
ST3GAL3-238	ENST00000533997	ASXL1	Q8IXJ9	1541 aa		13.18	□□□□□ -0.3
ST3GAL3-238	ENST00000533997	PIP4K2B	P78356	416 aa		13.17	□□□□□ -0.3
ST3GAL3-238	ENST00000533997	PRAM1	Q96QH2	718 aa		13.17	□□□□□ -0.3
ST3GAL3-238	ENST00000533997	SLC24A1	O60721	1099 aa		13.16	□□□□□ -0.3
ST3GAL3-238	ENST00000533997	WAPL	Q7Z5K2	1190 aa		13.16	□□□□□ -0.3
ST3GAL3-238	ENST00000533997	NBPF1	Q3BBV0	1214 aa		13.15	□□□□□ -0.3
ST3GAL3-238	ENST00000533997	CARD11	Q9BXL7	1154 aa		13.15	□□□□□ -0.3
ST3GAL3-238	ENST00000533997	NALCN	Q8IZF0	1738 aa		13.15	□□□□□ -0.3
ST3GAL3-238	ENST00000533997	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.13	□□□□□ -0.31
ST3GAL3-238	ENST00000533997	NBPF8	Q3BBV2	869 aa		13.13	□□□□□ -0.31
ST3GAL3-238	ENST00000533997	CDC42BPG	Q6DT37	1551 aa		13.12	□□□□□ -0.31
ST3GAL3-238	ENST00000533997	RALGAPB	Q86X10	1494 aa		13.12	□□□□□ -0.31
ST3GAL3-238	ENST00000533997	GPRASP1	Q5JY77	1395 aa		13.12	□□□□□ -0.31
ST3GAL3-238	ENST00000533997	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.12	□□□□□ -0.31	8e-7	■■■■□ 21
ST3GAL3-238	ENST00000533997	ILDR1	Q86SU0	546 aa	Predicted RBP	13.12	□□□□□ -0.31
ST3GAL3-238	ENST00000533997	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.12	□□□□□ -0.31
ST3GAL3-238	ENST00000533997	PLEKHH1	Q9ULM0	1364 aa		13.09	□□□□□ -0.31
ST3GAL3-238	ENST00000533997	ROBO1	Q9Y6N7	1651 aa		13.09	□□□□□ -0.31
ST3GAL3-238	ENST00000533997	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.09	□□□□□ -0.31
ST3GAL3-238	ENST00000533997	ADGRB2	O60241	1585 aa		13.08	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	MST1R	Q04912	1400 aa		13.08	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	WASL	O00401	505 aa	Predicted RBP	13.08	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	C1orf167	Q5SNV9	1468 aa		13.08	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	FMN2	Q9NZ56	1722 aa		13.08	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	ESCO1	Q5FWF5	840 aa		13.07	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	QRICH2	Q9H0J4	1663 aa		13.07	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	EVC2	Q86UK5	1308 aa		13.06	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	ANKAR	Q7Z5J8	1434 aa		13.05	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	BRINP3	Q76B58	766 aa		13.05	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.05	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	PHLPP1	O60346	1717 aa		13.05	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	ITSN1	Q15811	1721 aa		13.05	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	SRPK2	P78362	688 aa	Known RBP	13.04	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	CDK19	Q9BWU1	502 aa		13.04	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	KIF1A	Q12756	1690 aa		13.04	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	NPHP3	Q7Z494	1330 aa		13.04	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	SBNO2	Q9Y2G9	1366 aa		13.04	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	NUTM2F	A1L443	756 aa		13.03	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	HSPA1L	P34931	641 aa		13.03	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	LRRC59	Q96AG4	307 aa	Known RBP	13.03	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	TULP4	Q9NRJ4	1543 aa		13.03	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	RGPD8	O14715	1765 aa	Predicted RBP	13.02	□□□□□ -0.32
ST3GAL3-238	ENST00000533997	PSME1	Q06323	249 aa		13.02	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	CDCA8	Q53HL2	280 aa		13.02	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	PHF8	Q9UPP1	1060 aa		13.02	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	CCDC61	Q9Y6R9	512 aa		13.02	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.02	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	NUDT16	Q96DE0	195 aa	Known RBP	13.01	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	ORAI2	Q96SN7	254 aa		13.01	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	USP47	Q96K76	1375 aa		13.01	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	NHSL1	Q5SYE7	1610 aa		13.01	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	ST20-MTHFS	A0A0A6YYL1	179 aa		13	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	EIF4G2	P78344	907 aa	Known RBP eCLIP	13	□□□□□ -0.33	5e-7	■■■■■ 31.2
ST3GAL3-238	ENST00000533997	PUS7	Q96PZ0	661 aa	Known RBP	13	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	TMF1	P82094	1093 aa		12.99	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	NGDN	Q8NEJ9	315 aa	Known RBP	12.99	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	ATAD2	Q6PL18	1390 aa		12.98	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	JCAD	Q9P266	1359 aa		12.98	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	FOXO3	O43524	673 aa		12.98	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	ZEB1	P37275	1124 aa	Predicted RBP	12.98	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	MSH5	O43196	834 aa		12.97	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	CABP2	Q9NPB3	220 aa		12.97	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	USP32	Q8NFA0	1604 aa		12.96	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	SOS2	Q07890	1332 aa	Predicted RBP	12.96	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	PLEKHG3	A1L390	1219 aa		12.96	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	KRT28	Q7Z3Y7	464 aa		12.96	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	PMFBP1	Q8TBY8	1022 aa		12.96	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	ZNF692	Q9BU19	519 aa	Predicted RBP	12.96	□□□□□ -0.33
ST3GAL3-238	ENST00000533997	ATP7B	P35670	1465 aa		12.96	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	COL16A1	Q07092	1604 aa	Predicted RBP	12.95	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	BRD4	O60885	1362 aa	Predicted RBP	12.94	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	SPATA31A6	Q5VVP1	1343 aa		12.94	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	PRR36	Q9H6K5	1346 aa		12.94	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	PPIP5K1	Q6PFW1	1433 aa		12.94	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	NINL	Q9Y2I6	1382 aa		12.94	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	SHPRH	Q149N8	1683 aa		12.93	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	TOPAZ1	Q8N9V7	1692 aa		12.93	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	TESK2	Q96S53	571 aa		12.93	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	SBNO1	A3KN83	1393 aa		12.93	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	ACE	P12821	1306 aa		12.92	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	12.92	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	TERF2IP	Q9NYB0	399 aa		12.92	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	CABP1	Q9NZU7	370 aa		12.92	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	ARHGEF10	O15013	1369 aa		12.92	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	PAK3	O75914	559 aa	Predicted RBP	12.91	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	TMC1	Q8TDI8	760 aa		12.91	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	DDX17	Q92841	729 aa	Known RBP	12.91	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	POLR3A	O14802	1390 aa	Predicted RBP	12.91	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	PXDN	Q92626	1479 aa		12.91	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	SPATA31A3	Q5VYP0	1347 aa		12.9	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	HSPA5	P11021	654 aa	Known RBP	12.9	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	LMOD2	Q6P5Q4	547 aa		12.9	□□□□□ -0.34
ST3GAL3-238	ENST00000533997	XPC	Q01831	940 aa	Predicted RBP	12.89	□□□□□ -0.35
ST3GAL3-238	ENST00000533997	MEX3C	Q5U5Q3	659 aa	Known RBP	12.89	□□□□□ -0.35
ST3GAL3-238	ENST00000533997	TNS3	Q68CZ2	1445 aa		12.88	□□□□□ -0.35
ST3GAL3-238	ENST00000533997	HAP1	P54257	671 aa	Predicted RBP	12.88	□□□□□ -0.35
ST3GAL3-238	ENST00000533997	PNPLA6	Q8IY17	1366 aa		12.87	□□□□□ -0.35
ST3GAL3-238	ENST00000533997	COL22A1	Q8NFW1	1626 aa	Predicted RBP	12.87	□□□□□ -0.35
ST3GAL3-238	ENST00000533997	AKAP12	Q02952	1782 aa		12.86	□□□□□ -0.35

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