RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 BRINP3Q76B58 766 aa24.71■■□□□ 1.55
CTSB-229ENST00000533572 WAPLQ7Z5K2 1190 aa24.7■■□□□ 1.54
CTSB-229ENST00000533572 AHDC1Q5TGY3 1603 aaPredicted RBP24.68■■□□□ 1.54
CTSB-229ENST00000533572 SIRT1Q96EB6 747 aa24.67■■□□□ 1.54
CTSB-229ENST00000533572 PHF23Q9BUL5 403 aaPredicted RBP24.67■■□□□ 1.54
CTSB-229ENST00000533572 CDC42BPGQ6DT37 1551 aa24.67■■□□□ 1.54
CTSB-229ENST00000533572 C1orf167Q5SNV9 1468 aa24.66■■□□□ 1.54
CTSB-229ENST00000533572 JCADQ9P266 1359 aa24.66■■□□□ 1.54
CTSB-229ENST00000533572 L3MBTL2Q969R5 705 aa24.65■■□□□ 1.54
CTSB-229ENST00000533572 PLEKHH1Q9ULM0 1364 aa24.65■■□□□ 1.54
CTSB-229ENST00000533572 POGKQ9P215 609 aa24.64■■□□□ 1.54
CTSB-229ENST00000533572 COL16A1Q07092 1604 aaPredicted RBP24.64■■□□□ 1.53
CTSB-229ENST00000533572 ADGRB1O14514 1584 aa24.63■■□□□ 1.53
CTSB-229ENST00000533572 PRAM1Q96QH2 718 aa24.62■■□□□ 1.53
CTSB-229ENST00000533572 DLC1Q96QB1 1528 aa24.61■■□□□ 1.53
CTSB-229ENST00000533572 SAFB2Q14151 953 aaKnown RBP eCLIP24.61■■□□□ 1.53
CTSB-229ENST00000533572 TRAK1Q9UPV9 953 aa24.61■■□□□ 1.53
CTSB-229ENST00000533572 NHSL1Q5SYE7 1610 aa24.58■■□□□ 1.53
CTSB-229ENST00000533572 ORAI2Q96SN7 254 aa24.58■■□□□ 1.53
CTSB-229ENST00000533572 ESCO1Q5FWF5 840 aa24.57■■□□□ 1.52
CTSB-229ENST00000533572 NUTM2FA1L443 756 aa24.56■■□□□ 1.52
CTSB-229ENST00000533572 DDX17Q92841 729 aaKnown RBP24.54■■□□□ 1.52
CTSB-229ENST00000533572 LRRC59Q96AG4 307 aaKnown RBP24.54■■□□□ 1.52
CTSB-229ENST00000533572 KIAA1210Q9ULL0 1709 aa24.54■■□□□ 1.52
CTSB-229ENST00000533572 SPATA31A6Q5VVP1 1343 aa24.54■■□□□ 1.52
CTSB-229ENST00000533572 ZEB1P37275 1124 aaPredicted RBP24.53■■□□□ 1.52
CTSB-229ENST00000533572 FMN2Q9NZ56 1722 aa24.52■■□□□ 1.52
CTSB-229ENST00000533572 SHPRHQ149N8 1683 aa24.52■■□□□ 1.52
CTSB-229ENST00000533572 NPHP3Q7Z494 1330 aa24.51■■□□□ 1.51
CTSB-229ENST00000533572 MINK1Q8N4C8 1332 aaPredicted RBP24.5■■□□□ 1.51
CTSB-229ENST00000533572 MEX3CQ5U5Q3 659 aaKnown RBP24.49■■□□□ 1.51
CTSB-229ENST00000533572 EIF3AQ14152 1382 aaKnown RBP24.48■■□□□ 1.51
CTSB-229ENST00000533572 ADGRB2O60241 1585 aa24.47■■□□□ 1.51
CTSB-229ENST00000533572 HIRIP3Q9BW71 556 aaPredicted RBP24.47■■□□□ 1.51
CTSB-229ENST00000533572 ARHGEF28Q8N1W1 1705 aaKnown RBP24.47■■□□□ 1.51
CTSB-229ENST00000533572 SOS2Q07890 1332 aaPredicted RBP24.46■■□□□ 1.51
CTSB-229ENST00000533572 NBPF1Q3BBV0 1214 aa24.46■■□□□ 1.51
CTSB-229ENST00000533572 NUTM2BA6NNL0 878 aaPredicted RBP24.45■■□□□ 1.5
CTSB-229ENST00000533572 NUTM2EB1AL46 878 aaPredicted RBP24.45■■□□□ 1.5
CTSB-229ENST00000533572 FOXO3O43524 673 aa24.45■■□□□ 1.5
CTSB-229ENST00000533572 NUTM2AQ8IVF1 878 aaPredicted RBP24.45■■□□□ 1.5
CTSB-229ENST00000533572 KIF1AQ12756 1690 aa24.45■■□□□ 1.5
CTSB-229ENST00000533572 ANKARQ7Z5J8 1434 aa24.44■■□□□ 1.5
CTSB-229ENST00000533572 PNPLA6Q8IY17 1366 aa24.43■■□□□ 1.5
CTSB-229ENST00000533572 PHF8Q9UPP1 1060 aa24.42■■□□□ 1.5
CTSB-229ENST00000533572 WASLO00401 505 aaPredicted RBP24.41■■□□□ 1.5
CTSB-229ENST00000533572 XPCQ01831 940 aaPredicted RBP24.41■■□□□ 1.5
CTSB-229ENST00000533572 LRP6O75581 1613 aa24.41■■□□□ 1.5
CTSB-229ENST00000533572 NBPF8Q3BBV2 869 aa24.39■■□□□ 1.49
CTSB-229ENST00000533572 ROCK2O75116 1388 aaKnown RBP24.39■■□□□ 1.49
CTSB-229ENST00000533572 PXDNQ92626 1479 aa24.38■■□□□ 1.49
CTSB-229ENST00000533572 TULP4Q9NRJ4 1543 aa24.38■■□□□ 1.49
CTSB-229ENST00000533572 RGPD8O14715 1765 aaPredicted RBP24.38■■□□□ 1.49
CTSB-229ENST00000533572 TRPM1Q7Z4N2 1603 aa24.37■■□□□ 1.49
CTSB-229ENST00000533572 RGS17Q9UGC6 210 aaPredicted RBP24.37■■□□□ 1.49
CTSB-229ENST00000533572 RALGAPBQ86X10 1494 aa24.37■■□□□ 1.49
CTSB-229ENST00000533572 CENPJQ9HC77 1338 aaPredicted RBP24.36■■□□□ 1.49
CTSB-229ENST00000533572 PSME1Q06323 249 aa24.35■■□□□ 1.49
CTSB-229ENST00000533572 KRT28Q7Z3Y7 464 aa24.35■■□□□ 1.49
CTSB-229ENST00000533572 PMFBP1Q8TBY8 1022 aa24.34■■□□□ 1.49
CTSB-229ENST00000533572 USP32Q8NFA0 1604 aa24.34■■□□□ 1.49
CTSB-229ENST00000533572 GPRASP1Q5JY77 1395 aa24.33■■□□□ 1.49
CTSB-229ENST00000533572 PRR36Q9H6K5 1346 aa24.32■■□□□ 1.48
CTSB-229ENST00000533572 ZNF772Q68DY9 489 aaPredicted RBP24.31■■□□□ 1.48
CTSB-229ENST00000533572 CDK19Q9BWU1 502 aa24.31■■□□□ 1.48
CTSB-229ENST00000533572 ADAMTS2O95450 1211 aa24.3■■□□□ 1.48
CTSB-229ENST00000533572 COL22A1Q8NFW1 1626 aaPredicted RBP24.29■■□□□ 1.48
CTSB-229ENST00000533572 NGDNQ8NEJ9 315 aaKnown RBP24.29■■□□□ 1.48
CTSB-229ENST00000533572 NUDT16Q96DE0 195 aaKnown RBP24.29■■□□□ 1.48
CTSB-229ENST00000533572 C8orf37Q96NL8 207 aa24.29■■□□□ 1.48
CTSB-229ENST00000533572 CARD11Q9BXL7 1154 aa24.29■■□□□ 1.48
CTSB-229ENST00000533572 ITSN1Q15811 1721 aa24.29■■□□□ 1.48
CTSB-229ENST00000533572 SPATA31A3Q5VYP0 1347 aa24.29■■□□□ 1.48
CTSB-229ENST00000533572 QRICH2Q9H0J4 1663 aa24.28■■□□□ 1.48
CTSB-229ENST00000533572 POTEAQ6S8J7 498 aa24.28■■□□□ 1.48
CTSB-229ENST00000533572 TNS3Q68CZ2 1445 aa24.27■■□□□ 1.48
CTSB-229ENST00000533572 ATP7BP35670 1465 aa24.27■■□□□ 1.48
CTSB-229ENST00000533572 SRPK2P78362 688 aaKnown RBP24.27■■□□□ 1.48
CTSB-229ENST00000533572 LMOD2Q6P5Q4 547 aa24.27■■□□□ 1.48
CTSB-229ENST00000533572 SBNO1A3KN83 1393 aa24.27■■□□□ 1.48
CTSB-229ENST00000533572 AFF2P51816 1311 aa24.26■■□□□ 1.47
CTSB-229ENST00000533572 HAP1P54257 671 aaPredicted RBP24.25■■□□□ 1.47
CTSB-229ENST00000533572 NGLY1Q96IV0 654 aa24.25■■□□□ 1.47
CTSB-229ENST00000533572 ARHGEF10O15013 1369 aa24.24■■□□□ 1.47
CTSB-229ENST00000533572 CCDC61Q9Y6R9 512 aa24.23■■□□□ 1.47
CTSB-229ENST00000533572 EVC2Q86UK5 1308 aa24.21■■□□□ 1.47
CTSB-229ENST00000533572 PLEKHG5O94827 1062 aa24.2■■□□□ 1.46
CTSB-229ENST00000533572 PAK3O75914 559 aaPredicted RBP24.19■■□□□ 1.46
CTSB-229ENST00000533572 CABP2Q9NPB3 220 aa24.19■■□□□ 1.46
CTSB-229ENST00000533572 SLC24A1O60721 1099 aa24.18■■□□□ 1.46
CTSB-229ENST00000533572 TOPAZ1Q8N9V7 1692 aa24.18■■□□□ 1.46
CTSB-229ENST00000533572 PPIP5K1Q6PFW1 1433 aa24.16■■□□□ 1.46
CTSB-229ENST00000533572 TRPM3Q9HCF6 1732 aaPredicted RBP24.15■■□□□ 1.46
CTSB-229ENST00000533572 ACEP12821 1306 aa24.15■■□□□ 1.46
CTSB-229ENST00000533572 PLEKHG3A1L390 1219 aa24.15■■□□□ 1.46
CTSB-229ENST00000533572 RXRBP28702 533 aa24.15■■□□□ 1.46
CTSB-229ENST00000533572 EIF4G2P78344 907 aaKnown RBP eCLIP24.14■■□□□ 1.45
CTSB-229ENST00000533572 USP21Q9UK80 565 aa24.14■■□□□ 1.45
CTSB-229ENST00000533572 POLR3AO14802 1390 aaPredicted RBP24.14■■□□□ 1.45
CTSB-229ENST00000533572 USP47Q96K76 1375 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms