RNA–Protein interactions for RNA: ENST00000533554.1

TTC17-213, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 3

Gene TTC17, Length 396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-213ENST00000533554 TRIM67Q6ZTA4 783 aa11.47□□□□□ -0.57
TTC17-213ENST00000533554 TBC1D2Q9BYX2 928 aa11.47□□□□□ -0.57
TTC17-213ENST00000533554 FDX1P10109 184 aa11.46□□□□□ -0.57
TTC17-213ENST00000533554 SPRYD7Q5W111 196 aa11.46□□□□□ -0.57
TTC17-213ENST00000533554 USB1Q9BQ65 265 aaKnown RBP11.46□□□□□ -0.57
TTC17-213ENST00000533554 FCF1Q9Y324 198 aaKnown RBP11.46□□□□□ -0.57
TTC17-213ENST00000533554 PCDHB15Q9Y5E8 787 aa11.46□□□□□ -0.57
TTC17-213ENST00000533554 Q3C1V9 767 aa11.45□□□□□ -0.58
TTC17-213ENST00000533554 MSS51Q4VC12 460 aa11.45□□□□□ -0.58
TTC17-213ENST00000533554 GFRA3O60609 400 aa11.44□□□□□ -0.58
TTC17-213ENST00000533554 GPBP1L1Q9HC44 474 aaPredicted RBP11.44□□□□□ -0.58
TTC17-213ENST00000533554 MMP16P51512 607 aa11.43□□□□□ -0.58
TTC17-213ENST00000533554 LCE2BO14633 110 aa11.42□□□□□ -0.58
TTC17-213ENST00000533554 DXOO77932 396 aaKnown RBP11.4□□□□□ -0.58
TTC17-213ENST00000533554 ZNF598Q86UK7 904 aaKnown RBP11.4□□□□□ -0.58
TTC17-213ENST00000533554 RSBN1LQ6PCB5 846 aaPredicted RBP11.39□□□□□ -0.59
TTC17-213ENST00000533554 C6orf229H3BNL8 230 aa11.38□□□□□ -0.59
TTC17-213ENST00000533554 LIMD1Q9UGP4 676 aa11.38□□□□□ -0.59
TTC17-213ENST00000533554 SPTLC1O15269 473 aa11.37□□□□□ -0.59
TTC17-213ENST00000533554 RIC3Q7Z5B4 369 aa11.37□□□□□ -0.59
TTC17-213ENST00000533554 GDF9O60383 454 aa11.36□□□□□ -0.59
TTC17-213ENST00000533554 ZNF697Q5TEC3 545 aa11.36□□□□□ -0.59
TTC17-213ENST00000533554 MYSM1Q5VVJ2 828 aa11.36□□□□□ -0.59
TTC17-213ENST00000533554 PTCRAQ6ISU1 281 aaPredicted RBP11.36□□□□□ -0.59
TTC17-213ENST00000533554 RETREG3Q86VR2 466 aa11.36□□□□□ -0.59
TTC17-213ENST00000533554 PDZRN3Q9UPQ7 1066 aa11.36□□□□□ -0.59
TTC17-213ENST00000533554 FAM117AQ9C073 453 aa11.35□□□□□ -0.59
TTC17-213ENST00000533554 KDM4CQ9H3R0 1056 aa11.35□□□□□ -0.59
TTC17-213ENST00000533554 PKD2L1Q9P0L9 805 aa11.35□□□□□ -0.59
TTC17-213ENST00000533554 JUNDP17535 347 aa11.34□□□□□ -0.59
TTC17-213ENST00000533554 CABLES1Q8TDN4 633 aa11.34□□□□□ -0.59
TTC17-213ENST00000533554 HRCP23327 699 aa11.33□□□□□ -0.6
TTC17-213ENST00000533554 RPIAP49247 311 aa11.33□□□□□ -0.6
TTC17-213ENST00000533554 CSPP1Q1MSJ5 1256 aa11.33□□□□□ -0.6
TTC17-213ENST00000533554 FBXO31Q5XUX0 539 aaPredicted RBP11.33□□□□□ -0.6
TTC17-213ENST00000533554 CCDC24Q8N4L8 307 aa11.33□□□□□ -0.6
TTC17-213ENST00000533554 TNFRSF10AO00220 468 aa11.32□□□□□ -0.6
TTC17-213ENST00000533554 QPCTQ16769 361 aa11.32□□□□□ -0.6
TTC17-213ENST00000533554 PRR7Q8TB68 274 aa11.32□□□□□ -0.6
TTC17-213ENST00000533554 POLR3EQ9NVU0 708 aa11.32□□□□□ -0.6
TTC17-213ENST00000533554 PLEKHG3A1L390 1219 aa11.31□□□□□ -0.6
TTC17-213ENST00000533554 CFAP99D6REC4 459 aa11.31□□□□□ -0.6
TTC17-213ENST00000533554 MTMR2Q13614 643 aa11.31□□□□□ -0.6
TTC17-213ENST00000533554 Q6ZNB5 142 aa11.31□□□□□ -0.6
TTC17-213ENST00000533554 NRG2O14511 850 aaPredicted RBP11.3□□□□□ -0.6
TTC17-213ENST00000533554 GJA5P36382 358 aa11.3□□□□□ -0.6
TTC17-213ENST00000533554 FOXC1Q12948 553 aa11.3□□□□□ -0.6
TTC17-213ENST00000533554 TPRNQ4KMQ1 711 aa11.29□□□□□ -0.6
TTC17-213ENST00000533554 CD2BP2O95400 341 aaKnown RBP11.28□□□□□ -0.6
TTC17-213ENST00000533554 DIXDC1Q155Q3 683 aa11.28□□□□□ -0.6
TTC17-213ENST00000533554 RTL5Q5HYW3 569 aaPredicted RBP11.28□□□□□ -0.6
TTC17-213ENST00000533554 SKOR1P84550 965 aa11.27□□□□□ -0.61
TTC17-213ENST00000533554 PROCA1Q8NCQ7 364 aaPredicted RBP11.27□□□□□ -0.61
TTC17-213ENST00000533554 LILRB3O75022 631 aa11.26□□□□□ -0.61
TTC17-213ENST00000533554 PRR20EP86478 221 aa11.26□□□□□ -0.61
TTC17-213ENST00000533554 PRR20CP86479 221 aa11.26□□□□□ -0.61
TTC17-213ENST00000533554 PRR20DP86480 221 aa11.26□□□□□ -0.61
TTC17-213ENST00000533554 PRR20BP86481 221 aa11.26□□□□□ -0.61
TTC17-213ENST00000533554 PRR20AP86496 221 aa11.26□□□□□ -0.61
TTC17-213ENST00000533554 TRIM32Q13049 653 aa11.26□□□□□ -0.61
TTC17-213ENST00000533554 LAPTM4AQ15012 233 aa11.26□□□□□ -0.61
TTC17-213ENST00000533554 NUDT12Q9BQG2 462 aa11.26□□□□□ -0.61
TTC17-213ENST00000533554 ZBTB24O43167 697 aaPredicted RBP11.25□□□□□ -0.61
TTC17-213ENST00000533554 PER1O15534 1290 aaPredicted RBP11.24□□□□□ -0.61
TTC17-213ENST00000533554 EVA1BQ9NVM1 165 aa11.24□□□□□ -0.61
TTC17-213ENST00000533554 PRKCSHP14314 528 aaPredicted RBP11.23□□□□□ -0.61
TTC17-213ENST00000533554 TRAF7Q6Q0C0 670 aa11.23□□□□□ -0.61
TTC17-213ENST00000533554 ZBTB3Q9H5J0 574 aa11.23□□□□□ -0.61
TTC17-213ENST00000533554 SPDYE5A6NIY4 337 aa11.22□□□□□ -0.61
TTC17-213ENST00000533554 PRPF38BQ5VTL8 546 aaKnown RBP11.22□□□□□ -0.61
TTC17-213ENST00000533554 LYPD8Q6UX82 237 aa11.22□□□□□ -0.61
TTC17-213ENST00000533554 CLK2P49760 499 aaKnown RBP11.21□□□□□ -0.61
TTC17-213ENST00000533554 TUSC1Q2TAM9 212 aa11.21□□□□□ -0.61
TTC17-213ENST00000533554 DESI1Q6ICB0 168 aa11.21□□□□□ -0.61
TTC17-213ENST00000533554 TOR4AQ9NXH8 423 aa11.21□□□□□ -0.61
TTC17-213ENST00000533554 CCNYL3P0C7X3 344 aa11.2□□□□□ -0.62
TTC17-213ENST00000533554 PTPRNQ16849 979 aa11.2□□□□□ -0.62
TTC17-213ENST00000533554 BRPF1P55201 1214 aaPredicted RBP11.19□□□□□ -0.62
TTC17-213ENST00000533554 KCNH2Q12809 1159 aa11.19□□□□□ -0.62
TTC17-213ENST00000533554 SKIV2LQ15477 1246 aaKnown RBP11.19□□□□□ -0.62
TTC17-213ENST00000533554 MRGPRX2Q96LB1 330 aa11.19□□□□□ -0.62
TTC17-213ENST00000533554 RSPH6AQ9H0K4 717 aa11.19□□□□□ -0.62
TTC17-213ENST00000533554 NUTM2BA6NNL0 878 aaPredicted RBP11.18□□□□□ -0.62
TTC17-213ENST00000533554 NUTM2EB1AL46 878 aaPredicted RBP11.18□□□□□ -0.62
TTC17-213ENST00000533554 NEUROD2Q15784 382 aa11.18□□□□□ -0.62
TTC17-213ENST00000533554 RC3H1Q5TC82 1133 aaKnown RBP11.18□□□□□ -0.62
TTC17-213ENST00000533554 NUTM2DQ5VT03 806 aaPredicted RBP11.18□□□□□ -0.62
TTC17-213ENST00000533554 NUTM2AQ8IVF1 878 aaPredicted RBP11.18□□□□□ -0.62
TTC17-213ENST00000533554 IL27Q8NEV9 243 aa11.18□□□□□ -0.62
TTC17-213ENST00000533554 WNT7AO00755 349 aa11.17□□□□□ -0.62
TTC17-213ENST00000533554 SH3BP2P78314 561 aa11.17□□□□□ -0.62
TTC17-213ENST00000533554 MYT1Q01538 1121 aa11.17□□□□□ -0.62
TTC17-213ENST00000533554 BAP1Q92560 729 aa11.17□□□□□ -0.62
TTC17-213ENST00000533554 UNC93B1Q9H1C4 597 aa11.17□□□□□ -0.62
TTC17-213ENST00000533554 SH3D19Q5HYK7 790 aa11.16□□□□□ -0.62
TTC17-213ENST00000533554 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.16□□□□□ -0.62
TTC17-213ENST00000533554 MAP10Q9P2G4 905 aa11.16□□□□□ -0.62
TTC17-213ENST00000533554 FAM187AA6NFU0 413 aa11.15□□□□□ -0.62
TTC17-213ENST00000533554 F12P00748 615 aaPredicted RBP11.15□□□□□ -0.62
TTC17-213ENST00000533554 CTDSPL2Q05D32 466 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 163.1 ms