RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 ROBO2Q9HCK4 1378 aa12.03□□□□□ -0.48
NXF1-215ENST00000533440 GJD4Q96KN9 370 aaPredicted RBP12.01□□□□□ -0.49
NXF1-215ENST00000533440 CLTCL1P53675 1640 aa12□□□□□ -0.49
NXF1-215ENST00000533440 NPHP3Q7Z494 1330 aa12□□□□□ -0.49
NXF1-215ENST00000533440 PXDNQ92626 1479 aa12□□□□□ -0.49
NXF1-215ENST00000533440 MARF1Q9Y4F3 1742 aaKnown RBP12□□□□□ -0.49
NXF1-215ENST00000533440 HFM1A2PYH4 1435 aa11.99□□□□□ -0.49
NXF1-215ENST00000533440 BLMP54132 1417 aaPredicted RBP11.99□□□□□ -0.49
NXF1-215ENST00000533440 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.98□□□□□ -0.49
NXF1-215ENST00000533440 GLI3P10071 1580 aa11.97□□□□□ -0.49
NXF1-215ENST00000533440 SLIT2O94813 1529 aa11.97□□□□□ -0.49
NXF1-215ENST00000533440 VGFO15240 615 aaPredicted RBP11.97□□□□□ -0.49
NXF1-215ENST00000533440 CDC42BPGQ6DT37 1551 aa11.96□□□□□ -0.49
NXF1-215ENST00000533440 RALGAPBQ86X10 1494 aa11.96□□□□□ -0.49
NXF1-215ENST00000533440 KIF1BO60333 1816 aa11.96□□□□□ -0.49
NXF1-215ENST00000533440 ESCO1Q5FWF5 840 aa11.96□□□□□ -0.49
NXF1-215ENST00000533440 UNC5CLQ8IV45 518 aa11.96□□□□□ -0.49
NXF1-215ENST00000533440 FOXO3O43524 673 aa11.95□□□□□ -0.5
NXF1-215ENST00000533440 DEFB132Q7Z7B7 95 aa11.95□□□□□ -0.5
NXF1-215ENST00000533440 LRP5O75197 1615 aa11.95□□□□□ -0.5
NXF1-215ENST00000533440 RPGRIP1LQ68CZ1 1315 aa11.94□□□□□ -0.5
NXF1-215ENST00000533440 LRPPRCP42704 1394 aaKnown RBP11.93□□□□□ -0.5
NXF1-215ENST00000533440 ITGAEP38570 1179 aa11.93□□□□□ -0.5
NXF1-215ENST00000533440 XPCQ01831 940 aaPredicted RBP11.93□□□□□ -0.5
NXF1-215ENST00000533440 BRWD3Q6RI45 1802 aa11.93□□□□□ -0.5
NXF1-215ENST00000533440 SPATA31A3Q5VYP0 1347 aa11.91□□□□□ -0.5
NXF1-215ENST00000533440 ONECUT3O60422 494 aaPredicted RBP11.91□□□□□ -0.5
NXF1-215ENST00000533440 SF3B2Q13435 895 aaKnown RBP11.91□□□□□ -0.5
NXF1-215ENST00000533440 SEPT12Q8IYM1 358 aa11.91□□□□□ -0.5
NXF1-215ENST00000533440 NAIPQ13075 1403 aa11.91□□□□□ -0.5
NXF1-215ENST00000533440 USP32Q8NFA0 1604 aa11.9□□□□□ -0.5
NXF1-215ENST00000533440 TECPR2O15040 1411 aa11.9□□□□□ -0.5
NXF1-215ENST00000533440 VPS72Q15906 364 aa11.9□□□□□ -0.5
NXF1-215ENST00000533440 PPLO60437 1756 aa11.9□□□□□ -0.51
NXF1-215ENST00000533440 CCDC144AA2RUR9 1427 aa11.88□□□□□ -0.51
NXF1-215ENST00000533440 NUTM2FA1L443 756 aa11.88□□□□□ -0.51
NXF1-215ENST00000533440 WAPLQ7Z5K2 1190 aa11.88□□□□□ -0.51
NXF1-215ENST00000533440 NWD2Q9ULI1 1742 aa11.87□□□□□ -0.51
NXF1-215ENST00000533440 HRCP23327 699 aa11.87□□□□□ -0.51
NXF1-215ENST00000533440 KRT27Q7Z3Y8 459 aa11.87□□□□□ -0.51
NXF1-215ENST00000533440 KIF1AQ12756 1690 aa11.87□□□□□ -0.51
NXF1-215ENST00000533440 KRT28Q7Z3Y7 464 aa11.86□□□□□ -0.51
NXF1-215ENST00000533440 ABCC11Q96J66 1382 aa11.86□□□□□ -0.51
NXF1-215ENST00000533440 FMN2Q9NZ56 1722 aa11.86□□□□□ -0.51
NXF1-215ENST00000533440 ADGRF5Q8IZF2 1346 aa11.86□□□□□ -0.51
NXF1-215ENST00000533440 PLEKHH1Q9ULM0 1364 aa11.85□□□□□ -0.51
NXF1-215ENST00000533440 PSDA5PKW4 1024 aaPredicted RBP11.85□□□□□ -0.51
NXF1-215ENST00000533440 BAG6P46379 1132 aa11.85□□□□□ -0.51
NXF1-215ENST00000533440 TNS3Q68CZ2 1445 aa11.85□□□□□ -0.51
NXF1-215ENST00000533440 PLCH1Q4KWH8 1693 aa11.84□□□□□ -0.51
NXF1-215ENST00000533440 KNDC1Q76NI1 1749 aa11.84□□□□□ -0.51
NXF1-215ENST00000533440 STK26Q9P289 416 aa11.84□□□□□ -0.51
NXF1-215ENST00000533440 RRBP1Q9P2E9 1410 aaKnown RBP11.84□□□□□ -0.51
NXF1-215ENST00000533440 CABLES1Q8TDN4 633 aa11.83□□□□□ -0.52
NXF1-215ENST00000533440 SBNO1A3KN83 1393 aa11.82□□□□□ -0.52
NXF1-215ENST00000533440 HAP1P54257 671 aaPredicted RBP11.82□□□□□ -0.52
NXF1-215ENST00000533440 PSME1Q06323 249 aa11.82□□□□□ -0.52
NXF1-215ENST00000533440 SIRT1Q96EB6 747 aa11.82□□□□□ -0.52
NXF1-215ENST00000533440 PHF8Q9UPP1 1060 aa11.82□□□□□ -0.52
NXF1-215ENST00000533440 CCDC9Q9Y3X0 531 aaKnown RBP11.82□□□□□ -0.52
NXF1-215ENST00000533440 ABCA3Q99758 1704 aa11.82□□□□□ -0.52
NXF1-215ENST00000533440 FAM83GA6ND36 823 aa11.81□□□□□ -0.52
NXF1-215ENST00000533440 TMEM132EQ6IEE7 984 aa11.81□□□□□ -0.52
NXF1-215ENST00000533440 SLC4A1APQ9BWU0 796 aaKnown RBP11.81□□□□□ -0.52
NXF1-215ENST00000533440 NRXN1Q9ULB1 1477 aa11.81□□□□□ -0.52
NXF1-215ENST00000533440 ARHGEF10O15013 1369 aa11.8□□□□□ -0.52
NXF1-215ENST00000533440 ANKRD30BQ9BXX2 1392 aa11.8□□□□□ -0.52
NXF1-215ENST00000533440 DISP2A7MBM2 1401 aa11.8□□□□□ -0.52
NXF1-215ENST00000533440 YTHDC2Q9H6S0 1430 aaKnown RBP11.8□□□□□ -0.52
NXF1-215ENST00000533440 MSH5O43196 834 aa11.8□□□□□ -0.52
NXF1-215ENST00000533440 EN1Q05925 392 aaPredicted RBP11.8□□□□□ -0.52
NXF1-215ENST00000533440 NRAPQ86VF7 1730 aa11.8□□□□□ -0.52
NXF1-215ENST00000533440 PIK3C2GO75747 1445 aa11.79□□□□□ -0.52
NXF1-215ENST00000533440 SPATA31E1Q6ZUB1 1445 aa11.79□□□□□ -0.52
NXF1-215ENST00000533440 FAM98CQ17RN3 349 aaKnown RBP11.79□□□□□ -0.52
NXF1-215ENST00000533440 RGPD1P0DJD0 1748 aa11.79□□□□□ -0.52
NXF1-215ENST00000533440 IFT172Q9UG01 1749 aa11.79□□□□□ -0.52
NXF1-215ENST00000533440 RGPD8O14715 1765 aaPredicted RBP11.79□□□□□ -0.52
NXF1-215ENST00000533440 R3HDM1Q15032 1099 aaKnown RBP11.78□□□□□ -0.52
NXF1-215ENST00000533440 A0A0G2JS52 829 aa11.77□□□□□ -0.53
NXF1-215ENST00000533440 MYT1Q01538 1121 aa11.77□□□□□ -0.53
NXF1-215ENST00000533440 RGL3Q3MIN7 710 aa11.77□□□□□ -0.53
NXF1-215ENST00000533440 BTG4Q9NY30 223 aa11.77□□□□□ -0.53
NXF1-215ENST00000533440 PLEKHG5O94827 1062 aa11.76□□□□□ -0.53
NXF1-215ENST00000533440 LMOD2Q6P5Q4 547 aa11.76□□□□□ -0.53
NXF1-215ENST00000533440 PPARGC1BQ86YN6 1023 aaKnown RBP11.76□□□□□ -0.53
NXF1-215ENST00000533440 TNS1Q9HBL0 1735 aaKnown RBP11.76□□□□□ -0.53
NXF1-215ENST00000533440 COL14A1Q05707 1796 aaKnown RBP11.75□□□□□ -0.53
NXF1-215ENST00000533440 EZH2Q15910 746 aaKnown RBP11.75□□□□□ -0.53
NXF1-215ENST00000533440 FAM182BQ5T319 152 aa11.75□□□□□ -0.53
NXF1-215ENST00000533440 C14orf93Q9H972 538 aaKnown RBP11.75□□□□□ -0.53
NXF1-215ENST00000533440 SPATA31A5Q5VU36 1347 aa11.75□□□□□ -0.53
NXF1-215ENST00000533440 SPATA31A7Q8IWB4 1347 aa11.75□□□□□ -0.53
NXF1-215ENST00000533440 THSD7AQ9UPZ6 1657 aa11.75□□□□□ -0.53
NXF1-215ENST00000533440 CAMKK2Q96RR4 588 aa11.74□□□□□ -0.53
NXF1-215ENST00000533440 ANKARQ7Z5J8 1434 aa11.74□□□□□ -0.53
NXF1-215ENST00000533440 TRPM3Q9HCF6 1732 aaPredicted RBP11.74□□□□□ -0.53
NXF1-215ENST00000533440 PMFBP1Q8TBY8 1022 aa11.73□□□□□ -0.53
NXF1-215ENST00000533440 ALS2Q96Q42 1657 aa11.73□□□□□ -0.53
NXF1-215ENST00000533440 DHX57Q6P158 1386 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms