RNA–Protein interactions for RNA: ENST00000533415.5

CDC27-210, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-210ENST00000533415 ROBO2Q9HCK4 1378 aa18.37■□□□□ 0.53
CDC27-210ENST00000533415 LRPPRCP42704 1394 aaKnown RBP18.36■□□□□ 0.53
CDC27-210ENST00000533415 AMER1Q5JTC6 1135 aaPredicted RBP18.36■□□□□ 0.53
CDC27-210ENST00000533415 PTPRUQ92729 1446 aa18.35■□□□□ 0.53
CDC27-210ENST00000533415 CEP170BQ9Y4F5 1589 aaPredicted RBP18.35■□□□□ 0.53
CDC27-210ENST00000533415 PLEKHG1Q9ULL1 1385 aa18.34■□□□□ 0.53
CDC27-210ENST00000533415 SBNO2Q9Y2G9 1366 aa18.33■□□□□ 0.53
CDC27-210ENST00000533415 HSPA2P54652 639 aa18.33■□□□□ 0.52
CDC27-210ENST00000533415 AMOTL2Q9Y2J4 779 aa18.33■□□□□ 0.52
CDC27-210ENST00000533415 CABP1Q9NZU7 370 aa18.32■□□□□ 0.52
CDC27-210ENST00000533415 SCAF1Q9H7N4 1312 aaKnown RBP18.32■□□□□ 0.52
CDC27-210ENST00000533415 NSD3Q9BZ95 1437 aa18.31■□□□□ 0.52
CDC27-210ENST00000533415 MYBBP1AQ9BQG0 1328 aaKnown RBP18.31■□□□□ 0.52
CDC27-210ENST00000533415 PARD3Q8TEW0 1356 aa18.31■□□□□ 0.52
CDC27-210ENST00000533415 ARHGAP23Q9P227 1491 aa18.31■□□□□ 0.52
CDC27-210ENST00000533415 ABCC11Q96J66 1382 aa18.31■□□□□ 0.52
CDC27-210ENST00000533415 SALL2Q9Y467 1007 aaPredicted RBP18.3■□□□□ 0.52
CDC27-210ENST00000533415 SLIT1O75093 1534 aa18.29■□□□□ 0.52
CDC27-210ENST00000533415 KDM4FA0A1W2PPD8 638 aa18.29■□□□□ 0.52
CDC27-210ENST00000533415 KCNA6P17658 529 aa18.29■□□□□ 0.52
CDC27-210ENST00000533415 RALBP1Q15311 655 aa18.29■□□□□ 0.52
CDC27-210ENST00000533415 ANKLE2Q86XL3 938 aa18.28■□□□□ 0.52
CDC27-210ENST00000533415 FBLN1P23142 703 aa18.27■□□□□ 0.51
CDC27-210ENST00000533415 A0A1W2PP64 1363 aa18.26■□□□□ 0.51
CDC27-210ENST00000533415 PPP2R1AP30153 589 aa18.26■□□□□ 0.51
CDC27-210ENST00000533415 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.26■□□□□ 0.51
CDC27-210ENST00000533415 PNISRQ8TF01 805 aaKnown RBP18.26■□□□□ 0.51
CDC27-210ENST00000533415 GTF3C3Q9Y5Q9 886 aa18.26■□□□□ 0.51
CDC27-210ENST00000533415 WASLO00401 505 aaPredicted RBP18.25■□□□□ 0.51
CDC27-210ENST00000533415 GGNBP2Q9H3C7 697 aa18.25■□□□□ 0.51
CDC27-210ENST00000533415 MED14O60244 1454 aa18.24■□□□□ 0.51
CDC27-210ENST00000533415 PRR36Q9H6K5 1346 aa18.24■□□□□ 0.51
CDC27-210ENST00000533415 NLRP13Q86W25 1043 aa18.24■□□□□ 0.51
CDC27-210ENST00000533415 TBX22Q9Y458 520 aa18.23■□□□□ 0.51
CDC27-210ENST00000533415 NUDT16Q96DE0 195 aaKnown RBP18.22■□□□□ 0.51
CDC27-210ENST00000533415 ZRANB1Q9UGI0 708 aa18.22■□□□□ 0.51
CDC27-210ENST00000533415 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.21■□□□□ 0.51
CDC27-210ENST00000533415 SLC24A1O60721 1099 aa18.21■□□□□ 0.51
CDC27-210ENST00000533415 DLC1Q96QB1 1528 aa18.21■□□□□ 0.51
CDC27-210ENST00000533415 MORC1Q86VD1 984 aa18.21■□□□□ 0.51
CDC27-210ENST00000533415 CD163L1Q9NR16 1453 aa18.2■□□□□ 0.5
CDC27-210ENST00000533415 SETD1BQ9UPS6 1966 aaKnown RBP18.2■□□□□ 0.5
CDC27-210ENST00000533415 PMFBP1Q8TBY8 1022 aa18.2■□□□□ 0.5
CDC27-210ENST00000533415 ANKRD36BQ8N2N9 1353 aa18.19■□□□□ 0.5
CDC27-210ENST00000533415 TECPR2O15040 1411 aa18.18■□□□□ 0.5
CDC27-210ENST00000533415 BRD4O60885 1362 aaPredicted RBP18.18■□□□□ 0.5
CDC27-210ENST00000533415 PPIP5K1Q6PFW1 1433 aa18.17■□□□□ 0.5
CDC27-210ENST00000533415 ATAD2Q6PL18 1390 aa18.17■□□□□ 0.5
CDC27-210ENST00000533415 CPS1P31327 1500 aa18.17■□□□□ 0.5
CDC27-210ENST00000533415 ZNF142P52746 1687 aaPredicted RBP18.16■□□□□ 0.5
CDC27-210ENST00000533415 FAM135BQ49AJ0 1406 aa18.16■□□□□ 0.5
CDC27-210ENST00000533415 CGNL1Q0VF96 1302 aa18.15■□□□□ 0.5
CDC27-210ENST00000533415 FYB1O15117 783 aa18.15■□□□□ 0.5
CDC27-210ENST00000533415 NME9Q86XW9 330 aa18.15■□□□□ 0.5
CDC27-210ENST00000533415 CCDC146Q8IYE0 955 aa18.15■□□□□ 0.5
CDC27-210ENST00000533415 ADAMTS8Q9UP79 889 aa18.15■□□□□ 0.5
CDC27-210ENST00000533415 HDGFL2Q7Z4V5 671 aaPredicted RBP18.14■□□□□ 0.49
CDC27-210ENST00000533415 TERF2IPQ9NYB0 399 aa18.14■□□□□ 0.49
CDC27-210ENST00000533415 NPHP4O75161 1426 aaPredicted RBP18.14■□□□□ 0.49
CDC27-210ENST00000533415 KNDC1Q76NI1 1749 aa18.13■□□□□ 0.49
CDC27-210ENST00000533415 PLEKHG5O94827 1062 aa18.13■□□□□ 0.49
CDC27-210ENST00000533415 SOX12O15370 315 aa18.13■□□□□ 0.49
CDC27-210ENST00000533415 C14orf37Q86TY3 774 aa18.12■□□□□ 0.49
CDC27-210ENST00000533415 CCDC61Q9Y6R9 512 aa18.12■□□□□ 0.49
CDC27-210ENST00000533415 MTHFSP49914 203 aa18.11■□□□□ 0.49
CDC27-210ENST00000533415 ATP7BP35670 1465 aa18.11■□□□□ 0.49
CDC27-210ENST00000533415 PPM1GO15355 546 aaPredicted RBP18.11■□□□□ 0.49
CDC27-210ENST00000533415 PUS7Q96PZ0 661 aaKnown RBP18.11■□□□□ 0.49
CDC27-210ENST00000533415 SIRT1Q96EB6 747 aa18.1■□□□□ 0.49
CDC27-210ENST00000533415 ACEP12821 1306 aa18.09■□□□□ 0.49
CDC27-210ENST00000533415 NKTRP30414 1462 aaKnown RBP18.08■□□□□ 0.48
CDC27-210ENST00000533415 NUTM2GQ5VZR2 741 aa18.08■□□□□ 0.48
CDC27-210ENST00000533415 NPC1L1Q9UHC9 1359 aa18.07■□□□□ 0.48
CDC27-210ENST00000533415 XRN1Q8IZH2 1706 aaKnown RBP18.07■□□□□ 0.48
CDC27-210ENST00000533415 RGPD8O14715 1765 aaPredicted RBP18.07■□□□□ 0.48
CDC27-210ENST00000533415 WDR43Q15061 677 aaKnown RBP eCLIP18.07■□□□□ 0.48
CDC27-210ENST00000533415 IRX6P78412 446 aaPredicted RBP18.06■□□□□ 0.48
CDC27-210ENST00000533415 PTCH1Q13635 1447 aa18.06■□□□□ 0.48
CDC27-210ENST00000533415 XPCQ01831 940 aaPredicted RBP18.05■□□□□ 0.48
CDC27-210ENST00000533415 DIP2AQ14689 1571 aa18.05■□□□□ 0.48
CDC27-210ENST00000533415 PROSER2Q86WR7 435 aaPredicted RBP18.04■□□□□ 0.48
CDC27-210ENST00000533415 NGDNQ8NEJ9 315 aaKnown RBP18.04■□□□□ 0.48
CDC27-210ENST00000533415 ZBED9Q6R2W3 1325 aa18.03■□□□□ 0.48
CDC27-210ENST00000533415 RRS1Q15050 365 aaKnown RBP18.03■□□□□ 0.48
CDC27-210ENST00000533415 USP32Q8NFA0 1604 aa18.03■□□□□ 0.48
CDC27-210ENST00000533415 NINLQ9Y2I6 1382 aa18.03■□□□□ 0.48
CDC27-210ENST00000533415 CPSF1Q10570 1443 aaKnown RBP18.03■□□□□ 0.48
CDC27-210ENST00000533415 CHD2O14647 1828 aaKnown RBP18.03■□□□□ 0.48
CDC27-210ENST00000533415 CDCA7LQ96GN5 454 aa18.02■□□□□ 0.48
CDC27-210ENST00000533415 EMILIN1Q9Y6C2 1016 aa18.02■□□□□ 0.47
CDC27-210ENST00000533415 SUPT16HQ9Y5B9 1047 aaKnown RBP18.01■□□□□ 0.47
CDC27-210ENST00000533415 RRP7AQ9Y3A4 280 aaKnown RBP18.01■□□□□ 0.47
CDC27-210ENST00000533415 ORAI2Q96SN7 254 aa18■□□□□ 0.47
CDC27-210ENST00000533415 NALCNQ8IZF0 1738 aa18■□□□□ 0.47
CDC27-210ENST00000533415 NEUROD2Q15784 382 aa18■□□□□ 0.47
CDC27-210ENST00000533415 LMTK3Q96Q04 1460 aa18■□□□□ 0.47
CDC27-210ENST00000533415 PAK3O75914 559 aaPredicted RBP17.99■□□□□ 0.47
CDC27-210ENST00000533415 ESCO1Q5FWF5 840 aa17.99■□□□□ 0.47
CDC27-210ENST00000533415 CDC42BPGQ6DT37 1551 aa17.99■□□□□ 0.47
CDC27-210ENST00000533415 U2SURPO15042 1029 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms