RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 KNDC1Q76NI1 1749 aa29.43■■■□□ 2.3
AP004608.1-202ENST00000533390 SRPK2P78362 688 aaKnown RBP29.42■■■□□ 2.3
AP004608.1-202ENST00000533390 EID1Q9Y6B2 187 aa29.41■■■□□ 2.3
AP004608.1-202ENST00000533390 NINLQ9Y2I6 1382 aa29.41■■■□□ 2.3
AP004608.1-202ENST00000533390 METP08581 1390 aa29.4■■■□□ 2.3
AP004608.1-202ENST00000533390 PLEKHG1Q9ULL1 1385 aa29.4■■■□□ 2.3
AP004608.1-202ENST00000533390 NSD3Q9BZ95 1437 aa29.4■■■□□ 2.3
AP004608.1-202ENST00000533390 SLIT1O75093 1534 aa29.4■■■□□ 2.3
AP004608.1-202ENST00000533390 PPP2R1AP30153 589 aa29.4■■■□□ 2.3
AP004608.1-202ENST00000533390 ATAD2Q6PL18 1390 aa29.4■■■□□ 2.3
AP004608.1-202ENST00000533390 TXNDC2Q86VQ3 553 aa29.38■■■□□ 2.29
AP004608.1-202ENST00000533390 USP32Q8NFA0 1604 aa29.38■■■□□ 2.29
AP004608.1-202ENST00000533390 ANKRD36BQ8N2N9 1353 aa29.38■■■□□ 2.29
AP004608.1-202ENST00000533390 THEMISQ8N1K5 641 aaPredicted RBP29.37■■■□□ 2.29
AP004608.1-202ENST00000533390 ARHGAP23Q9P227 1491 aa29.37■■■□□ 2.29
AP004608.1-202ENST00000533390 LTKP29376 864 aa29.36■■■□□ 2.29
AP004608.1-202ENST00000533390 ADAMTSL3P82987 1691 aa29.35■■■□□ 2.29
AP004608.1-202ENST00000533390 ADAMTS13Q76LX8 1427 aa29.34■■■□□ 2.29
AP004608.1-202ENST00000533390 WAPLQ7Z5K2 1190 aa29.34■■■□□ 2.29
AP004608.1-202ENST00000533390 TECPR2O15040 1411 aa29.33■■■□□ 2.29
AP004608.1-202ENST00000533390 CPS1P31327 1500 aa29.33■■■□□ 2.29
AP004608.1-202ENST00000533390 SIRT1Q96EB6 747 aa29.33■■■□□ 2.29
AP004608.1-202ENST00000533390 CDK19Q9BWU1 502 aa29.32■■■□□ 2.28
AP004608.1-202ENST00000533390 FAM135BQ49AJ0 1406 aa29.32■■■□□ 2.28
AP004608.1-202ENST00000533390 PLEKHH1Q9ULM0 1364 aa29.31■■■□□ 2.28
AP004608.1-202ENST00000533390 CGNL1Q0VF96 1302 aa29.31■■■□□ 2.28
AP004608.1-202ENST00000533390 CEP170BQ9Y4F5 1589 aaPredicted RBP29.3■■■□□ 2.28
AP004608.1-202ENST00000533390 INSRP06213 1382 aa29.3■■■□□ 2.28
AP004608.1-202ENST00000533390 TERF2IPQ9NYB0 399 aa29.27■■■□□ 2.28
AP004608.1-202ENST00000533390 MED14O60244 1454 aa29.26■■■□□ 2.27
AP004608.1-202ENST00000533390 MORC1Q86VD1 984 aa29.25■■■□□ 2.27
AP004608.1-202ENST00000533390 A0A1W2PP64 1363 aa29.25■■■□□ 2.27
AP004608.1-202ENST00000533390 NSD2O96028 1365 aa29.25■■■□□ 2.27
AP004608.1-202ENST00000533390 DIP2AQ14689 1571 aa29.23■■■□□ 2.27
AP004608.1-202ENST00000533390 NEFLP07196 543 aa29.23■■■□□ 2.27
AP004608.1-202ENST00000533390 WDR43Q15061 677 aaKnown RBP eCLIP29.23■■■□□ 2.27
AP004608.1-202ENST00000533390 ZNF142P52746 1687 aaPredicted RBP29.22■■■□□ 2.27
AP004608.1-202ENST00000533390 HDGFL2Q7Z4V5 671 aaPredicted RBP29.21■■■□□ 2.27
AP004608.1-202ENST00000533390 BLMP54132 1417 aaPredicted RBP29.21■■■□□ 2.27
AP004608.1-202ENST00000533390 WASLO00401 505 aaPredicted RBP29.21■■■□□ 2.27
AP004608.1-202ENST00000533390 SLC26A8Q96RN1 970 aa29.21■■■□□ 2.27
AP004608.1-202ENST00000533390 SETD1BQ9UPS6 1966 aaKnown RBP29.21■■■□□ 2.27
AP004608.1-202ENST00000533390 TBX22Q9Y458 520 aa29.2■■■□□ 2.26
AP004608.1-202ENST00000533390 CD163L1Q9NR16 1453 aa29.18■■■□□ 2.26
AP004608.1-202ENST00000533390 CABP1Q9NZU7 370 aa29.17■■■□□ 2.26
AP004608.1-202ENST00000533390 SUPT16HQ9Y5B9 1047 aaKnown RBP29.17■■■□□ 2.26
AP004608.1-202ENST00000533390 ROBO2Q9HCK4 1378 aa29.17■■■□□ 2.26
AP004608.1-202ENST00000533390 ATP7BP35670 1465 aa29.15■■■□□ 2.26
AP004608.1-202ENST00000533390 ADAMTS8Q9UP79 889 aa29.15■■■□□ 2.26
AP004608.1-202ENST00000533390 ANKRD26Q9UPS8 1709 aa29.15■■■□□ 2.26
AP004608.1-202ENST00000533390 PTPRUQ92729 1446 aa29.14■■■□□ 2.25
AP004608.1-202ENST00000533390 ADGRB2O60241 1585 aa29.13■■■□□ 2.25
AP004608.1-202ENST00000533390 SMG6Q86US8 1419 aaKnown RBP29.13■■■□□ 2.25
AP004608.1-202ENST00000533390 POLR3AO14802 1390 aaPredicted RBP29.12■■■□□ 2.25
AP004608.1-202ENST00000533390 SENP3-EIF4A1A0A087X0R7 540 aa29.12■■■□□ 2.25
AP004608.1-202ENST00000533390 FKBP8Q14318 412 aa29.12■■■□□ 2.25
AP004608.1-202ENST00000533390 KIF20BQ96Q89 1820 aa29.11■■■□□ 2.25
AP004608.1-202ENST00000533390 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.11■■■□□ 2.25
AP004608.1-202ENST00000533390 TNNT2P45379 298 aaPredicted RBP29.1■■■□□ 2.25
AP004608.1-202ENST00000533390 NUDCQ9Y266 331 aa29.1■■■□□ 2.25
AP004608.1-202ENST00000533390 AMOTL2Q9Y2J4 779 aa29.1■■■□□ 2.25
AP004608.1-202ENST00000533390 PPIP5K1Q6PFW1 1433 aa29.09■■■□□ 2.25
AP004608.1-202ENST00000533390 NUDT16Q96DE0 195 aaKnown RBP29.08■■■□□ 2.25
AP004608.1-202ENST00000533390 ANKLE2Q86XL3 938 aa29.08■■■□□ 2.25
AP004608.1-202ENST00000533390 PTCH1Q13635 1447 aa29.08■■■□□ 2.25
AP004608.1-202ENST00000533390 SALL2Q9Y467 1007 aaPredicted RBP29.06■■■□□ 2.24
AP004608.1-202ENST00000533390 CCDC61Q9Y6R9 512 aa29.06■■■□□ 2.24
AP004608.1-202ENST00000533390 PDE3BQ13370 1112 aa29.05■■■□□ 2.24
AP004608.1-202ENST00000533390 PIK3R4Q99570 1358 aa29.05■■■□□ 2.24
AP004608.1-202ENST00000533390 XRN1Q8IZH2 1706 aaKnown RBP29.05■■■□□ 2.24
AP004608.1-202ENST00000533390 CFAP53Q96M91 514 aa29.04■■■□□ 2.24
AP004608.1-202ENST00000533390 GGNBP2Q9H3C7 697 aa29.04■■■□□ 2.24
AP004608.1-202ENST00000533390 FYB1O15117 783 aa29.04■■■□□ 2.24
AP004608.1-202ENST00000533390 ITSN1Q15811 1721 aa29.04■■■□□ 2.24
AP004608.1-202ENST00000533390 CDC42BPGQ6DT37 1551 aa29.03■■■□□ 2.24
AP004608.1-202ENST00000533390 CPSF1Q10570 1443 aaKnown RBP29.02■■■□□ 2.24
AP004608.1-202ENST00000533390 MTHFSP49914 203 aa29.02■■■□□ 2.24
AP004608.1-202ENST00000533390 SHPRHQ149N8 1683 aa29.01■■■□□ 2.23
AP004608.1-202ENST00000533390 AKAP12Q02952 1782 aa29■■■□□ 2.23
AP004608.1-202ENST00000533390 MON2Q7Z3U7 1717 aa29■■■□□ 2.23
AP004608.1-202ENST00000533390 EDC4Q6P2E9 1401 aaKnown RBP28.99■■■□□ 2.23
AP004608.1-202ENST00000533390 TOPAZ1Q8N9V7 1692 aa28.98■■■□□ 2.23
AP004608.1-202ENST00000533390 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.97■■■□□ 2.23
AP004608.1-202ENST00000533390 PRR36Q9H6K5 1346 aa28.97■■■□□ 2.23
AP004608.1-202ENST00000533390 ZNF692Q9BU19 519 aaPredicted RBP28.95■■■□□ 2.23
AP004608.1-202ENST00000533390 CHD2O14647 1828 aaKnown RBP28.95■■■□□ 2.22
AP004608.1-202ENST00000533390 NCKAP5LQ9HCH0 1330 aa28.93■■■□□ 2.22
AP004608.1-202ENST00000533390 CCDC146Q8IYE0 955 aa28.92■■■□□ 2.22
AP004608.1-202ENST00000533390 KCNA6P17658 529 aa28.91■■■□□ 2.22
AP004608.1-202ENST00000533390 NPHP4O75161 1426 aaPredicted RBP28.88■■■□□ 2.21
AP004608.1-202ENST00000533390 PLEKHG3A1L390 1219 aa28.87■■■□□ 2.21
AP004608.1-202ENST00000533390 NUTM2FA1L443 756 aa28.87■■■□□ 2.21
AP004608.1-202ENST00000533390 NGEFQ8N5V2 710 aa28.87■■■□□ 2.21
AP004608.1-202ENST00000533390 APAF1O14727 1248 aa28.85■■■□□ 2.21
AP004608.1-202ENST00000533390 IRX6P78412 446 aaPredicted RBP28.85■■■□□ 2.21
AP004608.1-202ENST00000533390 ERICH6BQ5W0A0 696 aa28.85■■■□□ 2.21
AP004608.1-202ENST00000533390 CDCA7LQ96GN5 454 aa28.85■■■□□ 2.21
AP004608.1-202ENST00000533390 ACEP12821 1306 aa28.84■■■□□ 2.21
AP004608.1-202ENST00000533390 NME9Q86XW9 330 aa28.83■■■□□ 2.21
AP004608.1-202ENST00000533390 MAP2P11137 1827 aaKnown RBP28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms