RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 KNDC1Q76NI1 1749 aa25.48■■□□□ 1.67
RPUSD4-207ENST00000532800 TECPR2O15040 1411 aa25.47■■□□□ 1.67
RPUSD4-207ENST00000532800 PIK3C2GO75747 1445 aa25.47■■□□□ 1.67
RPUSD4-207ENST00000532800 CDK12Q9NYV4 1490 aaPredicted RBP25.46■■□□□ 1.67
RPUSD4-207ENST00000532800 LRPPRCP42704 1394 aaKnown RBP25.45■■□□□ 1.67
RPUSD4-207ENST00000532800 ADAMTS2O95450 1211 aa25.45■■□□□ 1.66
RPUSD4-207ENST00000532800 WAPLQ7Z5K2 1190 aa25.45■■□□□ 1.66
RPUSD4-207ENST00000532800 TMEM132EQ6IEE7 984 aa25.44■■□□□ 1.66
RPUSD4-207ENST00000532800 PLEKHH1Q9ULM0 1364 aa25.44■■□□□ 1.66
RPUSD4-207ENST00000532800 UPF1Q92900 1129 aaKnown RBP eCLIP25.43■■□□□ 1.66
RPUSD4-207ENST00000532800 COL22A1Q8NFW1 1626 aaPredicted RBP25.43■■□□□ 1.66
RPUSD4-207ENST00000532800 ESCO1Q5FWF5 840 aa25.42■■□□□ 1.66
RPUSD4-207ENST00000532800 RGS12O14924 1447 aa25.41■■□□□ 1.66
RPUSD4-207ENST00000532800 ABCC11Q96J66 1382 aa25.41■■□□□ 1.66
RPUSD4-207ENST00000532800 PXDNQ92626 1479 aa25.4■■□□□ 1.66
RPUSD4-207ENST00000532800 NUTM2FA1L443 756 aa25.4■■□□□ 1.66
RPUSD4-207ENST00000532800 YTHDC2Q9H6S0 1430 aaKnown RBP25.39■■□□□ 1.66
RPUSD4-207ENST00000532800 NGLY1Q96IV0 654 aa25.39■■□□□ 1.66
RPUSD4-207ENST00000532800 QTRT2Q9H974 415 aaKnown RBP25.39■■□□□ 1.66
RPUSD4-207ENST00000532800 FMN2Q9NZ56 1722 aa25.39■■□□□ 1.65
RPUSD4-207ENST00000532800 NPHP3Q7Z494 1330 aa25.38■■□□□ 1.65
RPUSD4-207ENST00000532800 XPCQ01831 940 aaPredicted RBP25.37■■□□□ 1.65
RPUSD4-207ENST00000532800 MYOM2P54296 1465 aa25.36■■□□□ 1.65
RPUSD4-207ENST00000532800 NRXN1Q9ULB1 1477 aa25.36■■□□□ 1.65
RPUSD4-207ENST00000532800 FOXO3O43524 673 aa25.36■■□□□ 1.65
RPUSD4-207ENST00000532800 RBM6P78332 1123 aaKnown RBP25.36■■□□□ 1.65
RPUSD4-207ENST00000532800 RAB3GAP2Q9H2M9 1393 aa25.35■■□□□ 1.65
RPUSD4-207ENST00000532800 C14orf93Q9H972 538 aaKnown RBP25.32■■□□□ 1.64
RPUSD4-207ENST00000532800 USP21Q9UK80 565 aa25.32■■□□□ 1.64
RPUSD4-207ENST00000532800 ACIN1Q9UKV3 1341 aaKnown RBP25.32■■□□□ 1.64
RPUSD4-207ENST00000532800 MARF1Q9Y4F3 1742 aaKnown RBP25.32■■□□□ 1.64
RPUSD4-207ENST00000532800 CFAP70Q5T0N1 1121 aa25.31■■□□□ 1.64
RPUSD4-207ENST00000532800 KIF1AQ12756 1690 aa25.3■■□□□ 1.64
RPUSD4-207ENST00000532800 RGPD8O14715 1765 aaPredicted RBP25.3■■□□□ 1.64
RPUSD4-207ENST00000532800 FNBP4Q8N3X1 1017 aaPredicted RBP25.29■■□□□ 1.64
RPUSD4-207ENST00000532800 ATRNO75882 1429 aa25.27■■□□□ 1.64
RPUSD4-207ENST00000532800 SIRT1Q96EB6 747 aa25.26■■□□□ 1.63
RPUSD4-207ENST00000532800 TRPC5Q9UL62 973 aaPredicted RBP25.26■■□□□ 1.63
RPUSD4-207ENST00000532800 DHX57Q6P158 1386 aaKnown RBP25.26■■□□□ 1.63
RPUSD4-207ENST00000532800 SAFB2Q14151 953 aaKnown RBP eCLIP25.24■■□□□ 1.63
RPUSD4-207ENST00000532800 BCL9LQ86UU0 1499 aa25.23■■□□□ 1.63
RPUSD4-207ENST00000532800 SPATA31A3Q5VYP0 1347 aa25.22■■□□□ 1.63
RPUSD4-207ENST00000532800 PRAM1Q96QH2 718 aa25.22■■□□□ 1.63
RPUSD4-207ENST00000532800 ADGRB1O14514 1584 aa25.22■■□□□ 1.63
RPUSD4-207ENST00000532800 DLC1Q96QB1 1528 aa25.22■■□□□ 1.63
RPUSD4-207ENST00000532800 KRT28Q7Z3Y7 464 aa25.2■■□□□ 1.62
RPUSD4-207ENST00000532800 PHF8Q9UPP1 1060 aa25.19■■□□□ 1.62
RPUSD4-207ENST00000532800 USP32Q8NFA0 1604 aa25.19■■□□□ 1.62
RPUSD4-207ENST00000532800 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.17■■□□□ 1.62
RPUSD4-207ENST00000532800 TNS3Q68CZ2 1445 aa25.17■■□□□ 1.62
RPUSD4-207ENST00000532800 ADGRB2O60241 1585 aa25.17■■□□□ 1.62
RPUSD4-207ENST00000532800 ATAD2Q6PL18 1390 aa25.16■■□□□ 1.62
RPUSD4-207ENST00000532800 POGKQ9P215 609 aa25.15■■□□□ 1.62
RPUSD4-207ENST00000532800 SLIT2O94813 1529 aa25.14■■□□□ 1.62
RPUSD4-207ENST00000532800 KDM2AQ9Y2K7 1162 aa25.14■■□□□ 1.62
RPUSD4-207ENST00000532800 EP400Q96L91 3159 aa25.14■■□□□ 1.61
RPUSD4-207ENST00000532800 ABCA3Q99758 1704 aa25.14■■□□□ 1.61
RPUSD4-207ENST00000532800 TRAK1Q9UPV9 953 aa25.13■■□□□ 1.61
RPUSD4-207ENST00000532800 ANKARQ7Z5J8 1434 aa25.12■■□□□ 1.61
RPUSD4-207ENST00000532800 GLI3P10071 1580 aa25.11■■□□□ 1.61
RPUSD4-207ENST00000532800 PLEKHG5O94827 1062 aa25.11■■□□□ 1.61
RPUSD4-207ENST00000532800 CABLES1Q8TDN4 633 aa25.11■■□□□ 1.61
RPUSD4-207ENST00000532800 DCAF11Q8TEB1 546 aa25.11■■□□□ 1.61
RPUSD4-207ENST00000532800 GJD4Q96KN9 370 aaPredicted RBP25.11■■□□□ 1.61
RPUSD4-207ENST00000532800 SBNO1A3KN83 1393 aa25.1■■□□□ 1.61
RPUSD4-207ENST00000532800 PSME1Q06323 249 aa25.1■■□□□ 1.61
RPUSD4-207ENST00000532800 PMFBP1Q8TBY8 1022 aa25.1■■□□□ 1.61
RPUSD4-207ENST00000532800 HIRIP3Q9BW71 556 aaPredicted RBP25.1■■□□□ 1.61
RPUSD4-207ENST00000532800 UNC5CLQ8IV45 518 aa25.09■■□□□ 1.61
RPUSD4-207ENST00000532800 PLCH1Q4KWH8 1693 aa25.09■■□□□ 1.61
RPUSD4-207ENST00000532800 RALGAPBQ86X10 1494 aa25.09■■□□□ 1.61
RPUSD4-207ENST00000532800 MINK1Q8N4C8 1332 aaPredicted RBP25.08■■□□□ 1.6
RPUSD4-207ENST00000532800 TRPM3Q9HCF6 1732 aaPredicted RBP25.07■■□□□ 1.6
RPUSD4-207ENST00000532800 HAP1P54257 671 aaPredicted RBP25.07■■□□□ 1.6
RPUSD4-207ENST00000532800 LMOD2Q6P5Q4 547 aa25.07■■□□□ 1.6
RPUSD4-207ENST00000532800 PRR36Q9H6K5 1346 aa25.06■■□□□ 1.6
RPUSD4-207ENST00000532800 ARHGEF28Q8N1W1 1705 aaKnown RBP25.05■■□□□ 1.6
RPUSD4-207ENST00000532800 TULP4Q9NRJ4 1543 aa25.05■■□□□ 1.6
RPUSD4-207ENST00000532800 ARHGEF10O15013 1369 aa25.05■■□□□ 1.6
RPUSD4-207ENST00000532800 HRCP23327 699 aa25.04■■□□□ 1.6
RPUSD4-207ENST00000532800 NWD2Q9ULI1 1742 aa25.03■■□□□ 1.6
RPUSD4-207ENST00000532800 BRWD3Q6RI45 1802 aa25.02■■□□□ 1.6
RPUSD4-207ENST00000532800 ALS2Q96Q42 1657 aa25.02■■□□□ 1.6
RPUSD4-207ENST00000532800 WASLO00401 505 aaPredicted RBP25■■□□□ 1.59
RPUSD4-207ENST00000532800 EIF3AQ14152 1382 aaKnown RBP25■■□□□ 1.59
RPUSD4-207ENST00000532800 STAC3Q96MF2 364 aa24.99■■□□□ 1.59
RPUSD4-207ENST00000532800 VPS72Q15906 364 aa24.97■■□□□ 1.59
RPUSD4-207ENST00000532800 NRAPQ86VF7 1730 aa24.97■■□□□ 1.59
RPUSD4-207ENST00000532800 GPRASP1Q5JY77 1395 aa24.96■■□□□ 1.59
RPUSD4-207ENST00000532800 ATP7BP35670 1465 aa24.96■■□□□ 1.59
RPUSD4-207ENST00000532800 ITSN1Q15811 1721 aa24.95■■□□□ 1.59
RPUSD4-207ENST00000532800 CRYBG1Q9Y4K1 1723 aa24.95■■□□□ 1.59
RPUSD4-207ENST00000532800 FAM83GA6ND36 823 aa24.95■■□□□ 1.58
RPUSD4-207ENST00000532800 SEPT12Q8IYM1 358 aa24.93■■□□□ 1.58
RPUSD4-207ENST00000532800 CCDC9Q9Y3X0 531 aaKnown RBP24.93■■□□□ 1.58
RPUSD4-207ENST00000532800 SRCAPQ6ZRS2 3230 aa24.93■■□□□ 1.58
RPUSD4-207ENST00000532800 NGDNQ8NEJ9 315 aaKnown RBP24.92■■□□□ 1.58
RPUSD4-207ENST00000532800 KIAA1210Q9ULL0 1709 aa24.92■■□□□ 1.58
RPUSD4-207ENST00000532800 COL14A1Q05707 1796 aaKnown RBP24.91■■□□□ 1.58
RPUSD4-207ENST00000532800 CCDC125Q86Z20 511 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms