RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 RGL3Q3MIN7 710 aa25.71■■□□□ 1.71
CTSB-226ENST00000532656 CDC42BPGQ6DT37 1551 aa25.7■■□□□ 1.71
CTSB-226ENST00000532656 ESCO1Q5FWF5 840 aa25.68■■□□□ 1.7
CTSB-226ENST00000532656 STK26Q9P289 416 aa25.68■■□□□ 1.7
CTSB-226ENST00000532656 COL22A1Q8NFW1 1626 aaPredicted RBP25.66■■□□□ 1.7
CTSB-226ENST00000532656 IFT172Q9UG01 1749 aa25.66■■□□□ 1.7
CTSB-226ENST00000532656 SPATA31E1Q6ZUB1 1445 aa25.66■■□□□ 1.7
CTSB-226ENST00000532656 USP21Q9UK80 565 aa25.65■■□□□ 1.7
CTSB-226ENST00000532656 NPHP3Q7Z494 1330 aa25.64■■□□□ 1.7
CTSB-226ENST00000532656 WAPLQ7Z5K2 1190 aa25.64■■□□□ 1.7
CTSB-226ENST00000532656 MPHOSPH9Q99550 1183 aa25.64■■□□□ 1.7
CTSB-226ENST00000532656 NUTM2FA1L443 756 aa25.63■■□□□ 1.69
CTSB-226ENST00000532656 XPCQ01831 940 aaPredicted RBP25.63■■□□□ 1.69
CTSB-226ENST00000532656 ANKRD30BQ9BXX2 1392 aa25.63■■□□□ 1.69
CTSB-226ENST00000532656 PXDNQ92626 1479 aa25.63■■□□□ 1.69
CTSB-226ENST00000532656 TECPR2O15040 1411 aa25.63■■□□□ 1.69
CTSB-226ENST00000532656 LRPPRCP42704 1394 aaKnown RBP25.62■■□□□ 1.69
CTSB-226ENST00000532656 TMEM132EQ6IEE7 984 aa25.62■■□□□ 1.69
CTSB-226ENST00000532656 MYOM2P54296 1465 aa25.61■■□□□ 1.69
CTSB-226ENST00000532656 FOXO3O43524 673 aa25.61■■□□□ 1.69
CTSB-226ENST00000532656 PLEKHH1Q9ULM0 1364 aa25.6■■□□□ 1.69
CTSB-226ENST00000532656 FNBP4Q8N3X1 1017 aaPredicted RBP25.6■■□□□ 1.69
CTSB-226ENST00000532656 TRPC5Q9UL62 973 aaPredicted RBP25.6■■□□□ 1.69
CTSB-226ENST00000532656 KNDC1Q76NI1 1749 aa25.6■■□□□ 1.69
CTSB-226ENST00000532656 PIK3C2GO75747 1445 aa25.59■■□□□ 1.69
CTSB-226ENST00000532656 ABCC11Q96J66 1382 aa25.58■■□□□ 1.69
CTSB-226ENST00000532656 ATRNO75882 1429 aa25.56■■□□□ 1.68
CTSB-226ENST00000532656 FMN2Q9NZ56 1722 aa25.55■■□□□ 1.68
CTSB-226ENST00000532656 MARF1Q9Y4F3 1742 aaKnown RBP25.55■■□□□ 1.68
CTSB-226ENST00000532656 ATAD2Q6PL18 1390 aa25.55■■□□□ 1.68
CTSB-226ENST00000532656 YTHDC2Q9H6S0 1430 aaKnown RBP25.54■■□□□ 1.68
CTSB-226ENST00000532656 BCL9LQ86UU0 1499 aa25.52■■□□□ 1.68
CTSB-226ENST00000532656 KIF1AQ12756 1690 aa25.5■■□□□ 1.67
CTSB-226ENST00000532656 SPATA31A3Q5VYP0 1347 aa25.47■■□□□ 1.67
CTSB-226ENST00000532656 EP400Q96L91 3159 aa25.46■■□□□ 1.67
CTSB-226ENST00000532656 C14orf93Q9H972 538 aaKnown RBP25.46■■□□□ 1.67
CTSB-226ENST00000532656 RGPD8O14715 1765 aaPredicted RBP25.46■■□□□ 1.67
CTSB-226ENST00000532656 CFAP70Q5T0N1 1121 aa25.45■■□□□ 1.66
CTSB-226ENST00000532656 KRT28Q7Z3Y7 464 aa25.45■■□□□ 1.66
CTSB-226ENST00000532656 NRXN1Q9ULB1 1477 aa25.45■■□□□ 1.66
CTSB-226ENST00000532656 DHX57Q6P158 1386 aaKnown RBP25.44■■□□□ 1.66
CTSB-226ENST00000532656 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.43■■□□□ 1.66
CTSB-226ENST00000532656 SAFB2Q14151 953 aaKnown RBP eCLIP25.43■■□□□ 1.66
CTSB-226ENST00000532656 SIRT1Q96EB6 747 aa25.43■■□□□ 1.66
CTSB-226ENST00000532656 GJD4Q96KN9 370 aaPredicted RBP25.43■■□□□ 1.66
CTSB-226ENST00000532656 USP32Q8NFA0 1604 aa25.41■■□□□ 1.66
CTSB-226ENST00000532656 PHF8Q9UPP1 1060 aa25.41■■□□□ 1.66
CTSB-226ENST00000532656 PRAM1Q96QH2 718 aa25.4■■□□□ 1.66
CTSB-226ENST00000532656 SLIT2O94813 1529 aa25.4■■□□□ 1.66
CTSB-226ENST00000532656 TNS3Q68CZ2 1445 aa25.39■■□□□ 1.66
CTSB-226ENST00000532656 PLEKHG5O94827 1062 aa25.39■■□□□ 1.66
CTSB-226ENST00000532656 UNC5CLQ8IV45 518 aa25.39■■□□□ 1.66
CTSB-226ENST00000532656 SRCAPQ6ZRS2 3230 aa25.39■■□□□ 1.65
CTSB-226ENST00000532656 ACIN1Q9UKV3 1341 aaKnown RBP25.38■■□□□ 1.65
CTSB-226ENST00000532656 RALGAPBQ86X10 1494 aa25.38■■□□□ 1.65
CTSB-226ENST00000532656 GLI3P10071 1580 aa25.38■■□□□ 1.65
CTSB-226ENST00000532656 HAP1P54257 671 aaPredicted RBP25.37■■□□□ 1.65
CTSB-226ENST00000532656 CABLES1Q8TDN4 633 aa25.37■■□□□ 1.65
CTSB-226ENST00000532656 PSME1Q06323 249 aa25.36■■□□□ 1.65
CTSB-226ENST00000532656 RAB3GAP2Q9H2M9 1393 aa25.35■■□□□ 1.65
CTSB-226ENST00000532656 LMOD2Q6P5Q4 547 aa25.34■■□□□ 1.65
CTSB-226ENST00000532656 POGKQ9P215 609 aa25.34■■□□□ 1.65
CTSB-226ENST00000532656 DLC1Q96QB1 1528 aa25.33■■□□□ 1.65
CTSB-226ENST00000532656 ABCA3Q99758 1704 aa25.32■■□□□ 1.64
CTSB-226ENST00000532656 PMFBP1Q8TBY8 1022 aa25.32■■□□□ 1.64
CTSB-226ENST00000532656 PLCH1Q4KWH8 1693 aa25.32■■□□□ 1.64
CTSB-226ENST00000532656 SBNO1A3KN83 1393 aa25.31■■□□□ 1.64
CTSB-226ENST00000532656 CCDC125Q86Z20 511 aa25.31■■□□□ 1.64
CTSB-226ENST00000532656 ZRANB1Q9UGI0 708 aa25.3■■□□□ 1.64
CTSB-226ENST00000532656 ADGRB1O14514 1584 aa25.3■■□□□ 1.64
CTSB-226ENST00000532656 ADGRB2O60241 1585 aa25.3■■□□□ 1.64
CTSB-226ENST00000532656 BRWD3Q6RI45 1802 aa25.3■■□□□ 1.64
CTSB-226ENST00000532656 ARHGEF10O15013 1369 aa25.3■■□□□ 1.64
CTSB-226ENST00000532656 ANKARQ7Z5J8 1434 aa25.29■■□□□ 1.64
CTSB-226ENST00000532656 HIRIP3Q9BW71 556 aaPredicted RBP25.29■■□□□ 1.64
CTSB-226ENST00000532656 TRAK1Q9UPV9 953 aa25.29■■□□□ 1.64
CTSB-226ENST00000532656 NWD2Q9ULI1 1742 aa25.27■■□□□ 1.64
CTSB-226ENST00000532656 VPS72Q15906 364 aa25.26■■□□□ 1.63
CTSB-226ENST00000532656 KDM2AQ9Y2K7 1162 aa25.26■■□□□ 1.63
CTSB-226ENST00000532656 CCDC9Q9Y3X0 531 aaKnown RBP25.26■■□□□ 1.63
CTSB-226ENST00000532656 SEPT12Q8IYM1 358 aa25.25■■□□□ 1.63
CTSB-226ENST00000532656 MINK1Q8N4C8 1332 aaPredicted RBP25.25■■□□□ 1.63
CTSB-226ENST00000532656 TRPM3Q9HCF6 1732 aaPredicted RBP25.24■■□□□ 1.63
CTSB-226ENST00000532656 BLMP54132 1417 aaPredicted RBP25.24■■□□□ 1.63
CTSB-226ENST00000532656 DCAF11Q8TEB1 546 aa25.23■■□□□ 1.63
CTSB-226ENST00000532656 FAM83GA6ND36 823 aa25.22■■□□□ 1.63
CTSB-226ENST00000532656 PRR36Q9H6K5 1346 aa25.21■■□□□ 1.63
CTSB-226ENST00000532656 TULP4Q9NRJ4 1543 aa25.21■■□□□ 1.63
CTSB-226ENST00000532656 ALS2Q96Q42 1657 aa25.2■■□□□ 1.62
CTSB-226ENST00000532656 GPRASP1Q5JY77 1395 aa25.19■■□□□ 1.62
CTSB-226ENST00000532656 DEFB132Q7Z7B7 95 aa25.19■■□□□ 1.62
CTSB-226ENST00000532656 EIF3AQ14152 1382 aaKnown RBP25.18■■□□□ 1.62
CTSB-226ENST00000532656 NRAPQ86VF7 1730 aa25.17■■□□□ 1.62
CTSB-226ENST00000532656 WASLO00401 505 aaPredicted RBP25.17■■□□□ 1.62
CTSB-226ENST00000532656 A0A0G2JS52 829 aa25.16■■□□□ 1.62
CTSB-226ENST00000532656 ONECUT3O60422 494 aaPredicted RBP25.16■■□□□ 1.62
CTSB-226ENST00000532656 MYT1Q01538 1121 aa25.16■■□□□ 1.62
CTSB-226ENST00000532656 SF3B2Q13435 895 aaKnown RBP25.16■■□□□ 1.62
CTSB-226ENST00000532656 KRT27Q7Z3Y8 459 aa25.16■■□□□ 1.62
CTSB-226ENST00000532656 BTG4Q9NY30 223 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms