RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 NOB1Q9ULX3 412 aaKnown RBP14.25□□□□□ -0.13
NXF1-211ENST00000531709 HMOX1P09601 288 aa14.24□□□□□ -0.13
NXF1-211ENST00000531709 MLECQ14165 292 aa14.24□□□□□ -0.13
NXF1-211ENST00000531709 TBC1D2Q9BYX2 928 aa14.24□□□□□ -0.13
NXF1-211ENST00000531709 DIAPH1O60610 1272 aaKnown RBP14.23□□□□□ -0.13
NXF1-211ENST00000531709 TPRNQ4KMQ1 711 aa14.23□□□□□ -0.13
NXF1-211ENST00000531709 KDM5DQ9BY66 1539 aa14.23□□□□□ -0.13
NXF1-211ENST00000531709 ESF1Q9H501 851 aaKnown RBP14.23□□□□□ -0.13
NXF1-211ENST00000531709 C1orf115Q9H7X2 142 aa14.23□□□□□ -0.13
NXF1-211ENST00000531709 CHMP5Q9NZZ3 219 aa14.22□□□□□ -0.13
NXF1-211ENST00000531709 ZNF521Q96K83 1311 aa14.22□□□□□ -0.13
NXF1-211ENST00000531709 DUOX2Q9NRD8 1548 aa14.22□□□□□ -0.13
NXF1-211ENST00000531709 SSH1Q8WYL5 1049 aa14.21□□□□□ -0.13
NXF1-211ENST00000531709 PLCH2O75038 1416 aa14.2□□□□□ -0.14
NXF1-211ENST00000531709 ATF7IPQ6VMQ6 1270 aa14.2□□□□□ -0.14
NXF1-211ENST00000531709 PIK3C2GO75747 1445 aa14.2□□□□□ -0.14
NXF1-211ENST00000531709 CDC42BPAQ5VT25 1732 aa14.2□□□□□ -0.14
NXF1-211ENST00000531709 SAMD9LQ8IVG5 1584 aa14.2□□□□□ -0.14
NXF1-211ENST00000531709 GBP4Q96PP9 640 aa14.2□□□□□ -0.14
NXF1-211ENST00000531709 TRAK2O60296 914 aa14.19□□□□□ -0.14
NXF1-211ENST00000531709 TMEM57Q8N5G2 664 aa14.19□□□□□ -0.14
NXF1-211ENST00000531709 AAMPQ13685 434 aa14.19□□□□□ -0.14
NXF1-211ENST00000531709 WDR7Q9Y4E6 1490 aa14.19□□□□□ -0.14
NXF1-211ENST00000531709 POLR1AO95602 1720 aaPredicted RBP14.19□□□□□ -0.14
NXF1-211ENST00000531709 NOS1P29475 1434 aa14.19□□□□□ -0.14
NXF1-211ENST00000531709 TMPOP42166 694 aaKnown RBP14.19□□□□□ -0.14
NXF1-211ENST00000531709 ABCA8O94911 1581 aa14.18□□□□□ -0.14
NXF1-211ENST00000531709 TRIM27P14373 513 aa14.18□□□□□ -0.14
NXF1-211ENST00000531709 CHMP4BQ9H444 224 aaKnown RBP14.18□□□□□ -0.14
NXF1-211ENST00000531709 NINLQ9Y2I6 1382 aa14.18□□□□□ -0.14
NXF1-211ENST00000531709 NUTM2FA1L443 756 aa14.18□□□□□ -0.14
NXF1-211ENST00000531709 FBLN1P23142 703 aa14.18□□□□□ -0.14
NXF1-211ENST00000531709 EIF2AK4Q9P2K8 1649 aaKnown RBP14.18□□□□□ -0.14
NXF1-211ENST00000531709 THUMPD2Q9BTF0 503 aaKnown RBP14.17□□□□□ -0.14
NXF1-211ENST00000531709 PRKAR2BP31323 418 aa14.17□□□□□ -0.14
NXF1-211ENST00000531709 TBC1D32Q96NH3 1257 aa14.17□□□□□ -0.14
NXF1-211ENST00000531709 PRAM1Q96QH2 718 aa14.17□□□□□ -0.14
NXF1-211ENST00000531709 MCM4P33991 863 aa14.17□□□□□ -0.14
NXF1-211ENST00000531709 PLEKHG5O94827 1062 aa14.17□□□□□ -0.14
NXF1-211ENST00000531709 RAPGEF3O95398 923 aa14.17□□□□□ -0.14
NXF1-211ENST00000531709 TRMT2AQ8IZ69 625 aaKnown RBP14.16□□□□□ -0.14
NXF1-211ENST00000531709 ARHGEF5Q12774 1597 aa14.16□□□□□ -0.14
NXF1-211ENST00000531709 INSRP06213 1382 aa14.16□□□□□ -0.14
NXF1-211ENST00000531709 KIF16BQ96L93 1317 aa14.15□□□□□ -0.14
NXF1-211ENST00000531709 RSPH6AQ9H0K4 717 aa14.15□□□□□ -0.14
NXF1-211ENST00000531709 DDX11L8A8MPP1 907 aa14.15□□□□□ -0.14
NXF1-211ENST00000531709 CASC1Q6TDU7 716 aa14.15□□□□□ -0.14
NXF1-211ENST00000531709 CABP1Q9NZU7 370 aa14.15□□□□□ -0.14
NXF1-211ENST00000531709 TRPM1Q7Z4N2 1603 aa14.14□□□□□ -0.15
NXF1-211ENST00000531709 FOXD4L5Q5VV16 416 aaPredicted RBP14.14□□□□□ -0.15
NXF1-211ENST00000531709 FOXD4L4Q8WXT5 416 aaPredicted RBP14.14□□□□□ -0.15
NXF1-211ENST00000531709 C14orf93Q9H972 538 aaKnown RBP14.14□□□□□ -0.15
NXF1-211ENST00000531709 POLR3AO14802 1390 aaPredicted RBP14.14□□□□□ -0.15
NXF1-211ENST00000531709 PRDM15P57071 1507 aaPredicted RBP14.14□□□□□ -0.15
NXF1-211ENST00000531709 FAM43AQ8N2R8 423 aa14.13□□□□□ -0.15
NXF1-211ENST00000531709 CROCC2H7BZ55 1655 aa14.13□□□□□ -0.15
NXF1-211ENST00000531709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.13□□□□□ -0.15
NXF1-211ENST00000531709 CALD1Q05682 793 aaKnown RBP14.13□□□□□ -0.15
NXF1-211ENST00000531709 SLC4A10Q6U841 1118 aa14.13□□□□□ -0.15
NXF1-211ENST00000531709 DDX49Q9Y6V7 483 aaKnown RBP14.12□□□□□ -0.15
NXF1-211ENST00000531709 GLIPR1L2Q4G1C9 344 aa14.11□□□□□ -0.15
NXF1-211ENST00000531709 ADGRL1O94910 1474 aa14.11□□□□□ -0.15
NXF1-211ENST00000531709 NOL8Q76FK4 1167 aaKnown RBP14.11□□□□□ -0.15
NXF1-211ENST00000531709 CHD1LQ86WJ1 897 aa14.11□□□□□ -0.15
NXF1-211ENST00000531709 FANCAO15360 1455 aa14.11□□□□□ -0.15
NXF1-211ENST00000531709 MAST1Q9Y2H9 1570 aa14.11□□□□□ -0.15
NXF1-211ENST00000531709 ADCY10Q96PN6 1610 aa14.11□□□□□ -0.15
NXF1-211ENST00000531709 NPC1L1Q9UHC9 1359 aa14.1□□□□□ -0.15
NXF1-211ENST00000531709 TTC37Q6PGP7 1564 aa14.1□□□□□ -0.15
NXF1-211ENST00000531709 ZBTB7CA1YPR0 619 aa14.1□□□□□ -0.15
NXF1-211ENST00000531709 CDK19Q9BWU1 502 aa14.09□□□□□ -0.15
NXF1-211ENST00000531709 PANK2Q9BZ23 570 aa14.09□□□□□ -0.15
NXF1-211ENST00000531709 IDI1Q13907 227 aa14.08□□□□□ -0.16
NXF1-211ENST00000531709 C14orf37Q86TY3 774 aa14.08□□□□□ -0.16
NXF1-211ENST00000531709 ATP10AO60312 1499 aa14.08□□□□□ -0.16
NXF1-211ENST00000531709 CT47B1P0C2W7 299 aaPredicted RBP14.08□□□□□ -0.16
NXF1-211ENST00000531709 MRE11P49959 708 aa14.07□□□□□ -0.16
NXF1-211ENST00000531709 FOXD4L6Q3SYB3 417 aaPredicted RBP14.07□□□□□ -0.16
NXF1-211ENST00000531709 FOXD4L3Q6VB84 417 aaPredicted RBP14.07□□□□□ -0.16
NXF1-211ENST00000531709 USP19O94966 1318 aa14.07□□□□□ -0.16
NXF1-211ENST00000531709 GNAI1P63096 354 aa14.06□□□□□ -0.16
NXF1-211ENST00000531709 TWISTNBQ3B726 338 aaPredicted RBP14.06□□□□□ -0.16
NXF1-211ENST00000531709 XRCC6P12956 609 aaKnown RBP eCLIP14.06□□□□□ -0.16
NXF1-211ENST00000531709 MSNP26038 577 aaKnown RBP14.06□□□□□ -0.16
NXF1-211ENST00000531709 DCTN1Q14203 1278 aa14.06□□□□□ -0.16
NXF1-211ENST00000531709 COG3Q96JB2 828 aa14.06□□□□□ -0.16
NXF1-211ENST00000531709 UGGT1Q9NYU2 1555 aa14.05□□□□□ -0.16
NXF1-211ENST00000531709 FYB1O15117 783 aa14.05□□□□□ -0.16
NXF1-211ENST00000531709 WAPLQ7Z5K2 1190 aa14.05□□□□□ -0.16
NXF1-211ENST00000531709 CFAP65Q6ZU64 1925 aaKnown RBP14.05□□□□□ -0.16
NXF1-211ENST00000531709 CCDC27Q2M243 656 aa14.05□□□□□ -0.16
NXF1-211ENST00000531709 PTMAP06454 111 aaKnown RBP14.05□□□□□ -0.16
NXF1-211ENST00000531709 PREX2Q70Z35 1606 aa14.05□□□□□ -0.16
NXF1-211ENST00000531709 GRPEL1Q9HAV7 217 aa14.05□□□□□ -0.16
NXF1-211ENST00000531709 ERVK-7P63135 1459 aa14.04□□□□□ -0.16
NXF1-211ENST00000531709 RRS1Q15050 365 aaKnown RBP14.04□□□□□ -0.16
NXF1-211ENST00000531709 MCTP1Q6DN14 999 aa14.04□□□□□ -0.16
NXF1-211ENST00000531709 RTF1Q92541 710 aaKnown RBP14.04□□□□□ -0.16
NXF1-211ENST00000531709 RPGRIP1LQ68CZ1 1315 aa14.04□□□□□ -0.16
NXF1-211ENST00000531709 ABCC2Q92887 1545 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms